Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0888
         (733 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5MGH4 Cluster: Putative protease inhibitor 4; n=1; Lon...    90   6e-17
UniRef50_P10040 Cluster: Protein crumbs precursor; n=3; Sophopho...    34   4.1  
UniRef50_A2A5X5 Cluster: Ortholog of keratin associated protein ...    33   5.5  
UniRef50_UPI0000F2BD17 Cluster: PREDICTED: similar to hCG2043353...    33   7.2  

>UniRef50_Q5MGH4 Cluster: Putative protease inhibitor 4; n=1;
           Lonomia obliqua|Rep: Putative protease inhibitor 4 -
           Lonomia obliqua (Moth)
          Length = 102

 Score = 89.8 bits (213), Expect = 6e-17
 Identities = 35/56 (62%), Positives = 41/56 (73%)
 Frame = +1

Query: 85  SHPRGCVWILGKCSRNCEEGTHSYTTGCRPKMPEATCDVPVPVQETHSVCDFSACY 252
           +H RGC++ILG+CS  C  GTH Y TGC  KMPEATCD P PV E   +CD+SACY
Sbjct: 23  THSRGCIYILGRCSSECPVGTHGYATGCGRKMPEATCDAPNPVLEEGIICDYSACY 78


>UniRef50_P10040 Cluster: Protein crumbs precursor; n=3;
            Sophophora|Rep: Protein crumbs precursor - Drosophila
            melanogaster (Fruit fly)
          Length = 2146

 Score = 33.9 bits (74), Expect = 4.1
 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = +1

Query: 121  CSR--NCEEGTHSYTTGCRPKMPEATCDVPVPVQETHSVCDFSACY 252
            CS+  NC +G  +YT  C P      C++ +   + ++ C    CY
Sbjct: 911  CSKHGNCNDGIGTYTCECEPGFEGTHCEINIDECDRYNPCQRGTCY 956


>UniRef50_A2A5X5 Cluster: Ortholog of keratin associated protein
           16-1 KRTAP16-1; n=7; Murinae|Rep: Ortholog of keratin
           associated protein 16-1 KRTAP16-1 - Mus musculus (Mouse)
          Length = 502

 Score = 33.5 bits (73), Expect = 5.5
 Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
 Frame = +1

Query: 4   CLIMLC-ALIAVALAAPNTIGDVPIALPSHPRGCVWILGKCSRNC-EEGTHSYTTGCRPK 177
           C    C +L A++L +       P+ LPS  R   W L  C  +C   G  S    C+P 
Sbjct: 5   CCSRKCPSLPAISLCSTEVSCGGPVCLPSSCRSQTWQLVTCEDSCGSSGCGSQC--CQPS 62

Query: 178 MPEATCDVPVPVQET--HSVCDFSAC 249
              ++C  PV  + T     C  S+C
Sbjct: 63  CSVSSCCQPVCCEATICEPSCSVSSC 88


>UniRef50_UPI0000F2BD17 Cluster: PREDICTED: similar to hCG2043353;
           n=1; Monodelphis domestica|Rep: PREDICTED: similar to
           hCG2043353 - Monodelphis domestica
          Length = 356

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 25/78 (32%), Positives = 30/78 (38%), Gaps = 5/78 (6%)
 Frame = +1

Query: 4   CLIMLCALIAVALAAP-----NTIGDVPIALPSHPRGCVWILGKCSRNCEEGTHSYTTGC 168
           C +  C  I  A   P      T G+  I LPS  +G  W L  C  NC+      +  C
Sbjct: 5   CCLRTCQAIPSAPTVPFYANGGTCGNA-ICLPSSCQGKTWQLVTCQENCQ------SPSC 57

Query: 169 RPKMPEATCDVPVPVQET 222
               PE TC  P   Q T
Sbjct: 58  NLSYPEPTCCEPSSCQLT 75


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 648,670,585
Number of Sequences: 1657284
Number of extensions: 12079031
Number of successful extensions: 35526
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 33051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35311
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59265488880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)