Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0888
         (733 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC012191-1|AAH12191.1|  377|Homo sapiens hypothetical protein MG...    33   1.4  
AF253321-1|AAF64523.1|  716|Homo sapiens cervical mucin MUC5B pr...    31   5.6  
AM238513-1|CAJ87483.1|  254|Homo sapiens hair keratin associated...    30   9.8  
AB096963-1|BAE46378.1|  163|Homo sapiens keratin associated prot...    30   9.8  
AB096935-1|BAE46350.1|  254|Homo sapiens keratin associated prot...    30   9.8  

>BC012191-1|AAH12191.1|  377|Homo sapiens hypothetical protein
           MGC4655 protein.
          Length = 377

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +3

Query: 57  HRRCPDSPALASSWLRVDPRKMLKELRRRHPQLHD 161
           HR  P  PA +S   RV PR+  K   RR P+L D
Sbjct: 21  HRGPPPDPARSSYPTRVQPRRPTKGTHRRRPRLRD 55


>AF253321-1|AAF64523.1|  716|Homo sapiens cervical mucin MUC5B
           protein.
          Length = 716

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 24/76 (31%), Positives = 28/76 (36%), Gaps = 8/76 (10%)
 Frame = +1

Query: 19  CALIAVALAAPNTIGDVPIALPSHPRGCVWILGKCSRNC--EEGTHSYTTGCRP------ 174
           C L  +  AA  T    P A+PS   G  WIL + +      E T S  T   P      
Sbjct: 481 CILTELTTAATTTAATGPTAMPSSTPGTTWILTELTTTATTTESTGSTATPSSPGTTWIL 540

Query: 175 KMPEATCDVPVPVQET 222
             P  T  V VP   T
Sbjct: 541 TEPSTTATVTVPTGST 556


>AM238513-1|CAJ87483.1|  254|Homo sapiens hair keratin associated
           protein protein.
          Length = 254

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 11/64 (17%)
 Frame = +1

Query: 79  LPSHPRGCVWILGKC-----------SRNCEEGTHSYTTGCRPKMPEATCDVPVPVQETH 225
           LPS  +G +W+L  C           S +CE  T S TTGC P      C+ P    +  
Sbjct: 47  LPSSYQGNLWLLDYCQESYGEAPTCKSPSCEPKTCS-TTGCDPSNSSVPCNSP-SAGQVF 104

Query: 226 SVCD 237
           SVC+
Sbjct: 105 SVCE 108


>AB096963-1|BAE46378.1|  163|Homo sapiens keratin associated protein
           protein.
          Length = 163

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 21/76 (27%), Positives = 32/76 (42%)
 Frame = +1

Query: 1   RCLIMLCALIAVALAAPNTIGDVPIALPSHPRGCVWILGKCSRNCEEGTHSYTTGCRPKM 180
           RC++ +  +   +    + +G   I LPS  +   W+L  C   C E      T C+P  
Sbjct: 18  RCIVPVAQVTTTSTTDADCLGG--ICLPSSFQTGSWLLDHCQETCCE-----PTACQPTC 70

Query: 181 PEATCDVPVPVQETHS 228
            + T  V  P Q T S
Sbjct: 71  YQRTSCVSNPCQVTCS 86


>AB096935-1|BAE46350.1|  254|Homo sapiens keratin associated protein
           protein.
          Length = 254

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 11/64 (17%)
 Frame = +1

Query: 79  LPSHPRGCVWILGKC-----------SRNCEEGTHSYTTGCRPKMPEATCDVPVPVQETH 225
           LPS  +G +W+L  C           S +CE  T S TTGC P      C+ P    +  
Sbjct: 47  LPSSYQGNLWLLDYCQESYGEAPTCKSPSCEPKTCS-TTGCDPSNSSVPCNSP-SAGQVF 104

Query: 226 SVCD 237
           SVC+
Sbjct: 105 SVCE 108


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,075,605
Number of Sequences: 237096
Number of extensions: 1817922
Number of successful extensions: 5123
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5111
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)