Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0888
         (733 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M33753-1|AAA28428.1| 2146|Drosophila melanogaster crumbs protein...    34   0.23 
AE014297-3522|AAF56276.1| 2146|Drosophila melanogaster CG6383-PA...    34   0.23 
AE014297-3521|ABI31202.1| 2189|Drosophila melanogaster CG6383-PB...    34   0.23 
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    32   0.93 
AF273707-1|AAL35409.1|  879|Drosophila melanogaster PFTAIRE-inte...    30   2.8  
AE014297-819|AAO41521.1| 1308|Drosophila melanogaster CG33719-PB...    30   2.8  
AE014297-816|AAO41518.1|  879|Drosophila melanogaster CG33719-PA...    30   2.8  

>M33753-1|AAA28428.1| 2146|Drosophila melanogaster crumbs protein
            protein.
          Length = 2146

 Score = 33.9 bits (74), Expect = 0.23
 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = +1

Query: 121  CSR--NCEEGTHSYTTGCRPKMPEATCDVPVPVQETHSVCDFSACY 252
            CS+  NC +G  +YT  C P      C++ +   + ++ C    CY
Sbjct: 911  CSKHGNCNDGIGTYTCECEPGFEGTHCEINIDECDRYNPCQRGTCY 956


>AE014297-3522|AAF56276.1| 2146|Drosophila melanogaster CG6383-PA,
            isoform A protein.
          Length = 2146

 Score = 33.9 bits (74), Expect = 0.23
 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = +1

Query: 121  CSR--NCEEGTHSYTTGCRPKMPEATCDVPVPVQETHSVCDFSACY 252
            CS+  NC +G  +YT  C P      C++ +   + ++ C    CY
Sbjct: 911  CSKHGNCNDGIGTYTCECEPGFEGTHCEINIDECDRYNPCQRGTCY 956


>AE014297-3521|ABI31202.1| 2189|Drosophila melanogaster CG6383-PB,
            isoform B protein.
          Length = 2189

 Score = 33.9 bits (74), Expect = 0.23
 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = +1

Query: 121  CSR--NCEEGTHSYTTGCRPKMPEATCDVPVPVQETHSVCDFSACY 252
            CS+  NC +G  +YT  C P      C++ +   + ++ C    CY
Sbjct: 954  CSKHGNCNDGIGTYTCECEPGFEGTHCEINIDECDRYNPCQRGTCY 999


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
            protein.
          Length = 23015

 Score = 31.9 bits (69), Expect = 0.93
 Identities = 15/46 (32%), Positives = 18/46 (39%)
 Frame = +1

Query: 130  NCEEGTHSYTTGCRPKMPEATCDVPVPVQETHSVCDFSACYWILVQ 267
            NC    H     CR K P  +   P P Q  +   +  ACY  L Q
Sbjct: 8502 NCAPNEHCKLGHCRKKEPPGSPKTPEPCQSNNDCIESEACYMGLCQ 8547


>AF273707-1|AAL35409.1|  879|Drosophila melanogaster
           PFTAIRE-interacting factor 1A protein.
          Length = 879

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
 Frame = +1

Query: 49  PNTIGDVPIAL--PSHPRGCVWILGKCSRNCEEGTHSYTTGCRPKMPEATCD 198
           PN + D P  +  P   R   W+      NC   +HS+    + K P +  D
Sbjct: 43  PNGLDDAPTRMRAPDEMRATTWMTTLVGSNCHSHSHSHPAVAKSKDPNSDTD 94


>AE014297-819|AAO41521.1| 1308|Drosophila melanogaster CG33719-PB,
           isoform B protein.
          Length = 1308

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
 Frame = +1

Query: 49  PNTIGDVPIAL--PSHPRGCVWILGKCSRNCEEGTHSYTTGCRPKMPEATCD 198
           PN + D P  +  P   R   W+      NC   +HS+    + K P +  D
Sbjct: 43  PNGLDDAPTRMRAPDEMRATTWMTTLVGSNCHSHSHSHPAVAKSKDPNSDTD 94


>AE014297-816|AAO41518.1|  879|Drosophila melanogaster CG33719-PA,
           isoform A protein.
          Length = 879

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
 Frame = +1

Query: 49  PNTIGDVPIAL--PSHPRGCVWILGKCSRNCEEGTHSYTTGCRPKMPEATCD 198
           PN + D P  +  P   R   W+      NC   +HS+    + K P +  D
Sbjct: 43  PNGLDDAPTRMRAPDEMRATTWMTTLVGSNCHSHSHSHPAVAKSKDPNSDTD 94


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,757,611
Number of Sequences: 53049
Number of extensions: 579078
Number of successful extensions: 1657
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1655
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3293648160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)