Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0887
         (808 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83219-5|CAM35834.1|  390|Caenorhabditis elegans Hypothetical pr...    28   6.8  
AC006777-6|AAK72307.1|  517|Caenorhabditis elegans Hypothetical ...    28   9.0  

>Z83219-5|CAM35834.1|  390|Caenorhabditis elegans Hypothetical
           protein C31C9.8 protein.
          Length = 390

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +1

Query: 61  LHVCILFGFKKNTFTV*SRIYYCHIIGEPL 150
           +  CIL+ F+KN     S   +CH++G+ L
Sbjct: 12  IRTCILYEFRKNLPIFESFKNFCHVLGDDL 41


>AC006777-6|AAK72307.1|  517|Caenorhabditis elegans Hypothetical
           protein Y46H3D.4 protein.
          Length = 517

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +1

Query: 280 VYNLNFLCFFTSTLISTYMKMKMFNFFVSERIQNILNTDRF 402
           ++ LNF   F++  I  +  +K+F  F SE    +  T +F
Sbjct: 475 IFRLNFFILFSNNSILIFFILKVFVIFYSEHSFLVRRTSKF 515


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,652,120
Number of Sequences: 27780
Number of extensions: 340634
Number of successful extensions: 739
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)