Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0886
         (747 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71178-13|CAF31498.1|  342|Caenorhabditis elegans Hypothetical p...    29   2.6  
AC024801-2|AAK68512.1|  176|Caenorhabditis elegans Hypothetical ...    28   6.1  

>Z71178-13|CAF31498.1|  342|Caenorhabditis elegans Hypothetical
           protein B0024.13b protein.
          Length = 342

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +2

Query: 248 KCISLTFIRIKKYMMISKFATNNISTNFCLFF 343
           KC+ L F++ +KY ++     NN+S   C  F
Sbjct: 119 KCLLLNFVKQQKYCILQMLYFNNVSNILCNHF 150


>AC024801-2|AAK68512.1|  176|Caenorhabditis elegans Hypothetical
           protein Y50D7A.5 protein.
          Length = 176

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +2

Query: 467 THKIRKFL*KNHLFLTTKVSLLFAVYFKKSDMSMSTE 577
           T  IR+F+ KN +F+  +V      YF+ S   + TE
Sbjct: 19  TSSIRRFIVKNEVFMGRQVPEFCMDYFESSSAKLKTE 55


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,585,430
Number of Sequences: 27780
Number of extensions: 307184
Number of successful extensions: 562
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 562
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)