Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0885
(701 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0058 + 17548945-17548947,17549234-17549281,17549618-175496... 139 2e-33
02_01_0047 - 316960-317397,317647-317744,317837-318017,318122-31... 136 2e-32
01_03_0277 + 14496298-14496300,14496875-14496952,14497061-144972... 136 2e-32
04_04_0040 + 22322839-22324173 31 1.2
07_03_1757 + 29250163-29250349,29250612-29250813,29250898-292510... 30 2.0
03_05_0629 + 26248960-26249236,26249766-26249894,26250291-262508... 30 2.0
12_02_0735 - 22636835-22639502,22639755-22640734 29 2.7
11_06_0087 - 19919224-19922304 29 2.7
08_01_0220 - 1751367-1752854 29 2.7
04_03_1015 - 21734381-21736534 29 2.7
09_04_0672 + 19367940-19368203,19368307-19368399,19368711-19370078 29 3.6
06_01_0083 - 659510-661267,661577-662384,662700-663646 29 3.6
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 29 4.7
08_01_0334 + 2983306-2983593,2983697-2984116,2984230-2984291,298... 28 8.3
06_03_1011 - 26882011-26882157,26882576-26884248,26884607-268847... 28 8.3
05_03_0323 - 12424243-12424776 28 8.3
>05_04_0058 +
17548945-17548947,17549234-17549281,17549618-17549695,
17549952-17550132,17550223-17550320,17550827-17551258
Length = 279
Score = 139 bits (337), Expect = 2e-33
Identities = 63/84 (75%), Positives = 71/84 (84%)
Frame = +3
Query: 3 WMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVR 182
WMLDKLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT EV+ I+ QR + VDGKVR
Sbjct: 34 WMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYREVISILMQRHVMVDGKVR 93
Query: 183 TDPTYPAGFMDVVSIEKTNELFRL 254
TD TYPAGFMDVVSI KT E FRL
Sbjct: 94 TDKTYPAGFMDVVSIAKTGENFRL 117
Score = 126 bits (304), Expect = 2e-29
Identities = 54/89 (60%), Positives = 70/89 (78%)
Frame = +2
Query: 254 IYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQ 433
+YD KGRF +H I E+AK+KLCKV+ V G K +P+L T+DGRTIRYPDPLIK ND+I+
Sbjct: 118 LYDTKGRFRLHSIKDEDAKFKLCKVRSVQFGQKGIPFLNTNDGRTIRYPDPLIKANDTIK 177
Query: 434 LDIATTKIMDFIKFESGNLCMITGGVTWG 520
+D+ T KI+DFIKF+ GN+ M+TGG G
Sbjct: 178 IDLETNKIVDFIKFDVGNIVMVTGGRNTG 206
Score = 94.3 bits (224), Expect = 8e-20
Identities = 42/74 (56%), Positives = 55/74 (74%)
Frame = +1
Query: 478 VRELVYDHGRRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYI 657
V +V G RN GRVG I SRE+H GSF+ +H++D+ GH FATR+ NVF IGK K ++
Sbjct: 193 VGNIVMVTGGRNTGRVGVIKSREKHKGSFETIHVEDALGHQFATRMGNVFTIGKERKPWV 252
Query: 658 SLPRGKGIRLTIAE 699
SLP+GKGI+L+I E
Sbjct: 253 SLPKGKGIKLSIIE 266
>02_01_0047 -
316960-317397,317647-317744,317837-318017,318122-318199,
319023-319025
Length = 265
Score = 136 bits (329), Expect = 2e-32
Identities = 60/84 (71%), Positives = 71/84 (84%)
Frame = +3
Query: 3 WMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVR 182
WMLDKLGG +AP+PS+GPHK RECLPL++ +RNRLKYALT EV+ I+ QR + VDGKVR
Sbjct: 18 WMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREVISILMQRHVLVDGKVR 77
Query: 183 TDPTYPAGFMDVVSIEKTNELFRL 254
TD TYPAGFMDV+SI KT E +RL
Sbjct: 78 TDKTYPAGFMDVISIPKTGENYRL 101
Score = 123 bits (297), Expect = 1e-28
Identities = 52/89 (58%), Positives = 69/89 (77%)
Frame = +2
Query: 254 IYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQ 433
+YD KGRF + + E+AK+KLCKV+ V G K +PYL T+DGRTIRYPDP+IK ND+I+
Sbjct: 102 LYDTKGRFRLQSVKDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPIIKANDTIK 161
Query: 434 LDIATTKIMDFIKFESGNLCMITGGVTWG 520
+D+ T KI+DFIKF+ GN+ M+TGG G
Sbjct: 162 IDLETNKIVDFIKFDVGNVVMVTGGRNTG 190
Score = 97.1 bits (231), Expect = 1e-20
Identities = 43/74 (58%), Positives = 56/74 (75%)
Frame = +1
Query: 478 VRELVYDHGRRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYI 657
V +V G RN GRVG I +RE+H GSF+ +H++D+ GH FATRL NVF IGKG K ++
Sbjct: 177 VGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDALGHQFATRLGNVFTIGKGNKPWV 236
Query: 658 SLPRGKGIRLTIAE 699
SLP+GKGI+L+I E
Sbjct: 237 SLPKGKGIKLSIIE 250
>01_03_0277 +
14496298-14496300,14496875-14496952,14497061-14497241,
14497348-14497445,14497542-14497979
Length = 265
Score = 136 bits (329), Expect = 2e-32
Identities = 60/84 (71%), Positives = 71/84 (84%)
Frame = +3
Query: 3 WMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVR 182
WMLDKLGG +AP+PS+GPHK RECLPL++ +RNRLKYALT EV+ I+ QR + VDGKVR
Sbjct: 18 WMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREVISILMQRHVLVDGKVR 77
Query: 183 TDPTYPAGFMDVVSIEKTNELFRL 254
TD TYPAGFMDV+SI KT E +RL
Sbjct: 78 TDKTYPAGFMDVISIPKTGENYRL 101
Score = 124 bits (299), Expect = 7e-29
Identities = 53/89 (59%), Positives = 69/89 (77%)
Frame = +2
Query: 254 IYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQ 433
+YD KGRF + + E+AK+KLCKV+ V G K +PYL T+DGRTIRYPDPLIK ND+I+
Sbjct: 102 LYDTKGRFRLQSVKDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIK 161
Query: 434 LDIATTKIMDFIKFESGNLCMITGGVTWG 520
+D+ T KI+DFIKF+ GN+ M+TGG G
Sbjct: 162 IDLETNKIVDFIKFDVGNVVMVTGGRNTG 190
Score = 97.5 bits (232), Expect = 9e-21
Identities = 43/74 (58%), Positives = 56/74 (75%)
Frame = +1
Query: 478 VRELVYDHGRRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYI 657
V +V G RN GRVG I +RE+H GSF+ +H++D+ GH FATRL NVF IGKG K ++
Sbjct: 177 VGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDALGHAFATRLGNVFTIGKGNKPWV 236
Query: 658 SLPRGKGIRLTIAE 699
SLP+GKGI+L+I E
Sbjct: 237 SLPKGKGIKLSIIE 250
>04_04_0040 + 22322839-22324173
Length = 444
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +3
Query: 549 TSRL--LR-HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHP 683
TSRL LR H H HG + RH++ +R R H L A G P
Sbjct: 25 TSRLKGLRVHLTHVDAHGNYSRHQLLRRAARRSHHRMSRLVARATGVP 72
>07_03_1757 +
29250163-29250349,29250612-29250813,29250898-29251008,
29251112-29251160,29251247-29251353,29251439-29251942,
29252486-29252614,29252865-29253161,29253274-29253720,
29253828-29253893,29254109-29254169,29254314-29254463,
29254555-29254689,29254791-29254818,29255430-29255479
Length = 840
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -1
Query: 629 MNTLFNLVAKVCPVESLMCTMSKEPGCLSRDTMVPTRPKLR 507
+N +F L V L+CT+ GC + +VP P++R
Sbjct: 213 LNAIFELFVWVNDSTVLVCTIPSSRGCPPKKPLVPFGPRIR 253
>03_05_0629 +
26248960-26249236,26249766-26249894,26250291-26250847,
26250933-26251250
Length = 426
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -1
Query: 197 ISRVSP--NFPIYLYEALFHNFQDFVSGQSILQTIPQ 93
+SR P NF IY Y H+ Q F S Q + +PQ
Sbjct: 254 LSRTDPRHNFSIYFYHIYLHHQQGFSSIQKLASFLPQ 290
>12_02_0735 - 22636835-22639502,22639755-22640734
Length = 1215
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 641 PLPIMNTLFNLVAKVCPVESLMCTMSKEPGCL 546
PL NT+ +++A PVE L C +S + G L
Sbjct: 425 PLVTANTILSILAADYPVEKLACYLSDDGGAL 456
>11_06_0087 - 19919224-19922304
Length = 1026
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 345 DLRMFRTW*RMMAA-PSAIQTHLSKSTIPSS*TLQLRRL 458
DL R W +A PS HLS ++PSS T Q RRL
Sbjct: 208 DLSSARDWPLAIAMLPSLTALHLSSCSLPSSSTQQWRRL 246
>08_01_0220 - 1751367-1752854
Length = 495
Score = 29.5 bits (63), Expect = 2.7
Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 16/115 (13%)
Frame = +2
Query: 299 EEAKYKLCKVKRVATGPKNVPY-----------LVTHDGRTIRYPDPLIKVNDSIQLD-- 439
+ A K+C+ + V + P+ P L+ HDGR + PDPL + ++ L
Sbjct: 190 QPAFMKICQERHVVSTPEKAPAAPLPRSEYLRPLIFHDGRLVGRPDPLACLAVALWLPLG 249
Query: 440 --IATTKIM-DFIKFESGNLCMITGGVTWGAWAPSCPARDIPAPSTLCTSRTPRD 595
+A T+I+ F+ + G L G A P R C RT D
Sbjct: 250 AALAVTRILIAFLPYSVGLLLAAATGFQIRAHLGGAPPRWRGGTLYACNHRTLLD 304
>04_03_1015 - 21734381-21736534
Length = 717
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +3
Query: 309 STSCVKSSVWRPDLRMFRTW*RMMAAPSAIQTHLSKSTIPSS 434
S+S V S+V+ LR+ T R +AA I THL+ ST PS+
Sbjct: 38 SSSQVPSAVYASLLRL-ATSHRSLAAARRIATHLASSTAPST 78
>09_04_0672 + 19367940-19368203,19368307-19368399,19368711-19370078
Length = 574
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -3
Query: 96 SGKSPGASTRATCGDRLTVSVH 31
+G+SPG + RA GD L V+VH
Sbjct: 50 NGESPGPTIRAAQGDTLVVTVH 71
>06_01_0083 - 659510-661267,661577-662384,662700-663646
Length = 1170
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 641 PLPIMNTLFNLVAKVCPVESLMCTMSKEPGCL 546
PL NT+ +++A PVE L C +S + G L
Sbjct: 414 PLVTANTILSILAADYPVEKLSCYVSDDGGAL 445
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +2
Query: 527 APSCPARDI--PAPSTLCTSRTPRDTPSP 607
AP P+ D PAP T T +P TPSP
Sbjct: 70 APDAPSGDFFPPAPPTTTTPTSPGTTPSP 98
>08_01_0334 +
2983306-2983593,2983697-2984116,2984230-2984291,
2984525-2984672
Length = 305
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = -3
Query: 567 VEGAGMSLAGHDGAHAPQVTPPVIIHKFPDSNLMKSIIFVVAMSNWMESLTLISGS 400
+EG MS G D A A PP+ + SN + II A S+ + L++G+
Sbjct: 1 MEGGKMSSMGMDAASASVTVPPMQMQAGDQSNRIAIIISPRAGSSKILPFELVNGA 56
>06_03_1011 -
26882011-26882157,26882576-26884248,26884607-26884783,
26885313-26885416,26885896-26886032
Length = 745
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = +2
Query: 371 THDGRTIRYPDPLIKVNDSI-QLDIA---TTKIMDFIKFESGNLCMITG 505
+HD + + PDPL ND I ++ IA T ++D+ + + C + G
Sbjct: 599 SHDDKVVSEPDPLPVHNDKIDEVTIAAIQTCALVDYQQSQQNKPCSVNG 647
>05_03_0323 - 12424243-12424776
Length = 177
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = -3
Query: 687 EADALAARQRDVRLRALADYEHVVQPRGEGVSRGVLDVHNVEGAGMSLAGHD-GAHAPQV 511
+ +A A QR+ + R H ++P G G G N G G + GH GAH V
Sbjct: 102 DGEATAREQREAQQRHNIAAAHAMRPHGRGRGNG----GNGRGRGSAGRGHAIGAHEDDV 157
Query: 510 TPPVII 493
++
Sbjct: 158 DADFVL 163
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,759,140
Number of Sequences: 37544
Number of extensions: 537297
Number of successful extensions: 1924
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1923
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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