Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0884
(685 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF051030-1|ABN05618.1| 118|Apis mellifera phosphoenolpyruvate c... 155 5e-40
M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee homeobox-... 27 0.13
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 23 2.1
M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee homeobox-... 22 4.7
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 22 4.7
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 6.3
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 8.3
AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein. 21 8.3
AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta... 21 8.3
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 8.3
>EF051030-1|ABN05618.1| 118|Apis mellifera phosphoenolpyruvate
carboxykinase protein.
Length = 118
Score = 155 bits (375), Expect = 5e-40
Identities = 69/82 (84%), Positives = 75/82 (91%)
Frame = +1
Query: 262 IVGITNPQGKKRYIAAAFPSACGKTNLAMMTPTLPGYKVECVGDDIAWMKFDKDGVLRAI 441
I+ ITNP+GKKRYI AAFPSACGKTNLAMM PTLPGYK+ECVGDDIAWMKFDK+G LRAI
Sbjct: 1 ILAITNPKGKKRYITAAFPSACGKTNLAMMKPTLPGYKIECVGDDIAWMKFDKEGRLRAI 60
Query: 442 NSENGFFGIAPGTSAATNPIAM 507
N E GFFG+APGTS+ATNP AM
Sbjct: 61 NPEYGFFGVAPGTSSATNPNAM 82
Score = 46.0 bits (104), Expect = 3e-07
Identities = 16/24 (66%), Positives = 22/24 (91%)
Frame = +3
Query: 510 TVFKNTVFTNVAETPEGGVWWEGM 581
T+FKNT+FTNVA T +GG++WEG+
Sbjct: 84 TIFKNTIFTNVASTSDGGIFWEGL 107
>M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E30. ).
Length = 109
Score = 27.5 bits (58), Expect = 0.13
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -3
Query: 122 VRRCSEGRRASPECHRIRLREDNEQTARLDVEYLE 18
V+R G+ SPE R R EQ ARL E+ E
Sbjct: 7 VKRSHNGKNGSPEEKRPRTAFSAEQLARLKREFAE 41
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 23.4 bits (48), Expect = 2.1
Identities = 11/40 (27%), Positives = 16/40 (40%)
Frame = +2
Query: 509 DGVQKHRVH*RGGNT*GWGVVGRHGTSSGAPRRLERSTLG 628
DG ++ ++ WGV+ G G PR LG
Sbjct: 601 DGTEEDALNLSSAVWFAWGVLLNSGIGEGTPRSFSARVLG 640
>M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E60. ).
Length = 109
Score = 22.2 bits (45), Expect = 4.7
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = -3
Query: 119 RRCSEGRRASPECHRIRLREDNEQTARLDVEYLE 18
R G +PE R R EQ ARL E+ E
Sbjct: 8 RSDGRGNGGTPEEKRPRTAFSGEQLARLKREFAE 41
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 22.2 bits (45), Expect = 4.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 340 LAMMTPTLPGYKVECVGDDI 399
+ M+T TLPG V GD+I
Sbjct: 370 IVMLTLTLPGIGVVYNGDEI 389
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.3
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -2
Query: 573 PTTPHPQVFPP 541
P+TP PQ PP
Sbjct: 155 PSTPFPQFIPP 165
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.4 bits (43), Expect = 8.3
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = -1
Query: 613 FQSTRRSGAGPMPSHHTPPSGVSATL--VNTVFLNTVPLLSD 494
+ R SG +P+H PPS L V TV P +
Sbjct: 432 YYGNRFSGEYEIPAHGLPPSATRYDLGAVATVGTTVAPCFEE 473
>AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein.
Length = 145
Score = 21.4 bits (43), Expect = 8.3
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 348 DDANTARVQSRVRGGRHSLDEVRQGRRT 431
DD N +QS V + DE+ + +RT
Sbjct: 32 DDENCETLQSEVHITKDEYDEIGRLKRT 59
>AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta
protein precursor protein.
Length = 145
Score = 21.4 bits (43), Expect = 8.3
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 348 DDANTARVQSRVRGGRHSLDEVRQGRRT 431
DD N +QS V + DE+ + +RT
Sbjct: 32 DDENCETLQSEVHITKDEYDEIGRLKRT 59
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.4 bits (43), Expect = 8.3
Identities = 11/47 (23%), Positives = 17/47 (36%)
Frame = +3
Query: 519 KNTVFTNVAETPEGGVWWEGMGPAPERLVDWKGQPWDPSKKTPAAHP 659
K + T ++ P G P +G P +PS+ P P
Sbjct: 5 KQPIITQQSQQPSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGP 51
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,563
Number of Sequences: 438
Number of extensions: 4996
Number of successful extensions: 21
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -