Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0881
         (852 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    26   0.43 
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   2.3  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   2.3  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   4.1  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   7.1  

>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 25.8 bits (54), Expect = 0.43
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -3

Query: 700 EKPHVVSPSIKVQLTDEAPRCLGKMLG 620
           E+P  V+P IKV+  +EAP    +  G
Sbjct: 37  ERPDFVAPYIKVEADEEAPVLKSRSFG 63


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 424 PLATIAAQNGKPVYKYKSW 480
           P + +  +NGK V+K+  W
Sbjct: 34  PYSLVRVENGKKVFKFAWW 52


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 424 PLATIAAQNGKPVYKYKSW 480
           P + +  +NGK V+K+  W
Sbjct: 34  PYSLVRVENGKKVFKFAWW 52


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = -2

Query: 446 CAAIVAKGSSLLPLS--GIVKTPT 381
           CAA V +GS  LP++  G VK  T
Sbjct: 47  CAASVGEGSFYLPMNMQGFVKQQT 70


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
 Frame = +1

Query: 406 KGNREDPLATIAAQNGKPVYKYKSWR-IKGQ 495
           KGN+EDP    +   G   Y  + W  + GQ
Sbjct: 22  KGNQEDPCKLKSKVVGDETYCDRYWECVNGQ 52


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,242
Number of Sequences: 336
Number of extensions: 4654
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)