Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0881
(852 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68760-14|CAA92998.2| 908|Caenorhabditis elegans Hypothetical p... 142 4e-34
Z68748-13|CAA92957.2| 908|Caenorhabditis elegans Hypothetical p... 142 4e-34
U40060-3|AAA81142.2| 974|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z81586-1|CAB04690.1| 579|Caenorhabditis elegans Hypothetical pr... 30 2.4
U41263-9|AAC24424.1| 179|Caenorhabditis elegans Hypothetical pr... 28 7.3
AF067219-12|AAC17033.2| 162|Caenorhabditis elegans Hypothetical... 28 9.7
>Z68760-14|CAA92998.2| 908|Caenorhabditis elegans Hypothetical
protein F36H1.6 protein.
Length = 908
Score = 142 bits (343), Expect = 4e-34
Identities = 63/84 (75%), Positives = 70/84 (83%)
Frame = +3
Query: 501 P*RLEQYKSVNADLNVLPFCTQFIPMEVITAPKYESICYHPSILPRHRGASSVNWTLIEG 680
P LE YKS A+LNVLPFCTQFIP+E+ AP +SI YHPSILP+HRGAS++NWTLIEG
Sbjct: 73 PEMLELYKSFGAELNVLPFCTQFIPLEITEAPAKKSIIYHPSILPKHRGASAINWTLIEG 132
Query: 681 DTTCGFSIFWADDGLDTGPILLQK 752
D G SIFWADDGLDTGPILLQK
Sbjct: 133 DEEAGLSIFWADDGLDTGPILLQK 156
Score = 75.8 bits (178), Expect = 4e-14
Identities = 34/62 (54%), Positives = 46/62 (74%)
Frame = +1
Query: 304 LRVAIIGQSTFAAEVFKLIQRDGHEVVGVFTIPDKGNREDPLATIAAQNGKPVYKYKSWR 483
+++AIIGQS F +V+K ++++GHE+V VFTIPDK RED LA AA++G PV K WR
Sbjct: 1 MKIAIIGQSAFGVDVYKELRKNGHEIVVVFTIPDKNGREDLLAVEAAKDGVPVQKPSRWR 60
Query: 484 IK 489
K
Sbjct: 61 KK 62
Score = 39.5 bits (88), Expect = 0.003
Identities = 15/39 (38%), Positives = 27/39 (69%)
Frame = +2
Query: 734 PHITAKELSQTIDDTVDTIYNKFLYPEGIKALAEAVNMV 850
P + K+ +DT++T+Y +FLYP G+ A+AE+V ++
Sbjct: 151 PILLQKKCKVEENDTLNTLYKRFLYPAGVAAVAESVELI 189
>Z68748-13|CAA92957.2| 908|Caenorhabditis elegans Hypothetical
protein F36H1.6 protein.
Length = 908
Score = 142 bits (343), Expect = 4e-34
Identities = 63/84 (75%), Positives = 70/84 (83%)
Frame = +3
Query: 501 P*RLEQYKSVNADLNVLPFCTQFIPMEVITAPKYESICYHPSILPRHRGASSVNWTLIEG 680
P LE YKS A+LNVLPFCTQFIP+E+ AP +SI YHPSILP+HRGAS++NWTLIEG
Sbjct: 73 PEMLELYKSFGAELNVLPFCTQFIPLEITEAPAKKSIIYHPSILPKHRGASAINWTLIEG 132
Query: 681 DTTCGFSIFWADDGLDTGPILLQK 752
D G SIFWADDGLDTGPILLQK
Sbjct: 133 DEEAGLSIFWADDGLDTGPILLQK 156
Score = 75.8 bits (178), Expect = 4e-14
Identities = 34/62 (54%), Positives = 46/62 (74%)
Frame = +1
Query: 304 LRVAIIGQSTFAAEVFKLIQRDGHEVVGVFTIPDKGNREDPLATIAAQNGKPVYKYKSWR 483
+++AIIGQS F +V+K ++++GHE+V VFTIPDK RED LA AA++G PV K WR
Sbjct: 1 MKIAIIGQSAFGVDVYKELRKNGHEIVVVFTIPDKNGREDLLAVEAAKDGVPVQKPSRWR 60
Query: 484 IK 489
K
Sbjct: 61 KK 62
Score = 39.5 bits (88), Expect = 0.003
Identities = 15/39 (38%), Positives = 27/39 (69%)
Frame = +2
Query: 734 PHITAKELSQTIDDTVDTIYNKFLYPEGIKALAEAVNMV 850
P + K+ +DT++T+Y +FLYP G+ A+AE+V ++
Sbjct: 151 PILLQKKCKVEENDTLNTLYKRFLYPAGVAAVAESVELI 189
>U40060-3|AAA81142.2| 974|Caenorhabditis elegans Hypothetical protein
F38B6.4 protein.
Length = 974
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 618 HPSILPRHRGASSVNWTLIEGDTTCGFSIFWADDGLDTGPILLQK 752
HPS+LP +GA ++ L G G + + D+ +D G I+ Q+
Sbjct: 891 HPSLLPAFKGAHALQDALNFGVRIVGCTAHFVDELVDHGDIIAQR 935
>Z81586-1|CAB04690.1| 579|Caenorhabditis elegans Hypothetical
protein T05F1.2 protein.
Length = 579
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 308 ELPLLAKVHLQLKFSNSSKETVMKLW 385
+LP+L K++ KFS + KET+ LW
Sbjct: 43 DLPILDKINYLEKFSENEKETLKGLW 68
>U41263-9|AAC24424.1| 179|Caenorhabditis elegans Hypothetical
protein T19D12.3 protein.
Length = 179
Score = 28.3 bits (60), Expect = 7.3
Identities = 22/66 (33%), Positives = 29/66 (43%)
Frame = +3
Query: 579 EVITAPKYESICYHPSILPRHRGASSVNWTLIEGDTTCGFSIFWADDGLDTGPILLQKSY 758
E I P Y Y+ S L ++ GA S+ DT SIF D + G I L +Y
Sbjct: 40 ETINIP-YAHTDYYGSYLLQYGGAKSLMALQSNIDTLFSNSIFSIDTTVSDGLIWLSDNY 98
Query: 759 PKPSMT 776
P + T
Sbjct: 99 PDGANT 104
>AF067219-12|AAC17033.2| 162|Caenorhabditis elegans Hypothetical
protein R12E2.12 protein.
Length = 162
Score = 27.9 bits (59), Expect = 9.7
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = +1
Query: 310 VAIIGQSTFAAEVFKLIQRDGHEVVGVFTIPDK----GNREDPLATIAAQNGKPVYKYKS 477
V++I +S A++ K + R G+ ++ + +K G+R+ P +A Q +PVY
Sbjct: 6 VSMITRSLSKADLVKALTRAGNTLLDHGAVIEKVESLGHRDLPYKRLAKQTNEPVYASNF 65
Query: 478 WRIKGQVIPEDLSST 522
+ K + E T
Sbjct: 66 FLFKAHMSREARQKT 80
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,091,238
Number of Sequences: 27780
Number of extensions: 440952
Number of successful extensions: 885
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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