Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0880
         (675 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    27   0.41 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   6.7  
AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    23   6.7  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    23   8.8  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    23   8.8  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 27.5 bits (58), Expect = 0.41
 Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +3

Query: 354 NVGGRVRKISESRSEGPALSPRSAGLSPH-RSAPAMR 461
           N    +RKI  SR      SPRS G  P  RS PA R
Sbjct: 242 NAHASIRKIPPSRRNPRRRSPRSGGRWPSCRSPPARR 278


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 9/52 (17%)
 Frame = -2

Query: 371 HPASHVEPRLLRRF*GSTGPLRVVYVP---------IVLHYWHHERHLAKVA 243
           HP +  +P+L +   G++G    V  P         +  H+ H + H A VA
Sbjct: 835 HPGAQTQPQLSQHPPGASGRSSAVITPPSTHHQAAAVAAHHHHLQHHAAMVA 886


>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = +1

Query: 316 PVEPQNRRRRRGSTWEAGCGKYRSHGPKARRCHHDRQG 429
           PV+ Q  +RR    WE G       GP    C   +QG
Sbjct: 408 PVKIQIPKRRCFKCWETGHFSRDCKGPDRTDCDAVKQG 445


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -2

Query: 311 LRVVYVPIVLHYWHHERHLAKVAVTLLLERF*RNCLR 201
           +R ++ P V   W H   LA     L  E+  R C+R
Sbjct: 213 VRPMHPPNVTCAWDHAGELASDLYALYDEQLDRRCMR 249


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -2

Query: 311 LRVVYVPIVLHYWHHERHLAKVAVTLLLERF*RNCLR 201
           +R ++ P V   W H   LA     L  E+  R C+R
Sbjct: 213 VRPMHPPNVTCAWDHAGELASDLYALYDEQLDRRCMR 249


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 592,808
Number of Sequences: 2352
Number of extensions: 11287
Number of successful extensions: 31
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)