Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0880
         (675 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical pr...    29   4.0  
Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical pr...    29   4.0  
Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical p...    29   4.0  
Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical pr...    29   4.0  
AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical ...    29   4.0  
AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical ...    29   4.0  
Z73425-5|CAA97787.1|  427|Caenorhabditis elegans Hypothetical pr...    28   5.3  

>Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical protein
            T06D8.1b protein.
          Length = 3653

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -1

Query: 492  ASEARDSTTTSASPERCGED*ALPIVVTTPG 400
            A+EA + TTTSA  E  GED  +  VV + G
Sbjct: 2273 ATEASEETTTSAVTEGSGEDTTVVAVVESSG 2303



 Score = 28.7 bits (61), Expect = 4.0
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -1

Query: 492  ASEARDSTTTSASPERCGED*ALPIVVTTPG 400
            A+EA + TTTSA  E  GED  +  VV + G
Sbjct: 2336 ATEASEETTTSAVTEGSGEDTTVVAVVESSG 2366



 Score = 28.7 bits (61), Expect = 4.0
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -1

Query: 492  ASEARDSTTTSASPERCGED*ALPIVVTTPG 400
            A+EA + TTTSA  E  GED  +  VV + G
Sbjct: 2716 ATEASEETTTSAVTEGSGEDTTVVAVVESSG 2746



 Score = 27.9 bits (59), Expect = 7.0
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = -1

Query: 492  ASEARDSTTTSASPERCGED*ALPIVVTTPG 400
            A+EA + TTTSA  E  GED  +  VV   G
Sbjct: 2147 ATEASEETTTSAVTEGSGEDTTVVAVVELSG 2177


>Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical protein
            T06D8.1a protein.
          Length = 3719

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -1

Query: 492  ASEARDSTTTSASPERCGED*ALPIVVTTPG 400
            A+EA + TTTSA  E  GED  +  VV + G
Sbjct: 2273 ATEASEETTTSAVTEGSGEDTTVVAVVESSG 2303



 Score = 28.7 bits (61), Expect = 4.0
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -1

Query: 492  ASEARDSTTTSASPERCGED*ALPIVVTTPG 400
            A+EA + TTTSA  E  GED  +  VV + G
Sbjct: 2336 ATEASEETTTSAVTEGSGEDTTVVAVVESSG 2366



 Score = 28.7 bits (61), Expect = 4.0
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -1

Query: 492  ASEARDSTTTSASPERCGED*ALPIVVTTPG 400
            A+EA + TTTSA  E  GED  +  VV + G
Sbjct: 2716 ATEASEETTTSAVTEGSGEDTTVVAVVESSG 2746



 Score = 27.9 bits (59), Expect = 7.0
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = -1

Query: 492  ASEARDSTTTSASPERCGED*ALPIVVTTPG 400
            A+EA + TTTSA  E  GED  +  VV   G
Sbjct: 2147 ATEASEETTTSAVTEGSGEDTTVVAVVELSG 2177


>Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical
            protein T06D8.1b protein.
          Length = 3653

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -1

Query: 492  ASEARDSTTTSASPERCGED*ALPIVVTTPG 400
            A+EA + TTTSA  E  GED  +  VV + G
Sbjct: 2273 ATEASEETTTSAVTEGSGEDTTVVAVVESSG 2303



 Score = 28.7 bits (61), Expect = 4.0
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -1

Query: 492  ASEARDSTTTSASPERCGED*ALPIVVTTPG 400
            A+EA + TTTSA  E  GED  +  VV + G
Sbjct: 2336 ATEASEETTTSAVTEGSGEDTTVVAVVESSG 2366



 Score = 28.7 bits (61), Expect = 4.0
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -1

Query: 492  ASEARDSTTTSASPERCGED*ALPIVVTTPG 400
            A+EA + TTTSA  E  GED  +  VV + G
Sbjct: 2716 ATEASEETTTSAVTEGSGEDTTVVAVVESSG 2746



 Score = 27.9 bits (59), Expect = 7.0
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = -1

Query: 492  ASEARDSTTTSASPERCGED*ALPIVVTTPG 400
            A+EA + TTTSA  E  GED  +  VV   G
Sbjct: 2147 ATEASEETTTSAVTEGSGEDTTVVAVVELSG 2177


>Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical protein
            T06D8.1a protein.
          Length = 3719

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -1

Query: 492  ASEARDSTTTSASPERCGED*ALPIVVTTPG 400
            A+EA + TTTSA  E  GED  +  VV + G
Sbjct: 2273 ATEASEETTTSAVTEGSGEDTTVVAVVESSG 2303



 Score = 28.7 bits (61), Expect = 4.0
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -1

Query: 492  ASEARDSTTTSASPERCGED*ALPIVVTTPG 400
            A+EA + TTTSA  E  GED  +  VV + G
Sbjct: 2336 ATEASEETTTSAVTEGSGEDTTVVAVVESSG 2366



 Score = 28.7 bits (61), Expect = 4.0
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -1

Query: 492  ASEARDSTTTSASPERCGED*ALPIVVTTPG 400
            A+EA + TTTSA  E  GED  +  VV + G
Sbjct: 2716 ATEASEETTTSAVTEGSGEDTTVVAVVESSG 2746



 Score = 27.9 bits (59), Expect = 7.0
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = -1

Query: 492  ASEARDSTTTSASPERCGED*ALPIVVTTPG 400
            A+EA + TTTSA  E  GED  +  VV   G
Sbjct: 2147 ATEASEETTTSAVTEGSGEDTTVVAVVELSG 2177


>AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical
            protein T06D8.1b protein.
          Length = 3653

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -1

Query: 492  ASEARDSTTTSASPERCGED*ALPIVVTTPG 400
            A+EA + TTTSA  E  GED  +  VV + G
Sbjct: 2273 ATEASEETTTSAVTEGSGEDTTVVAVVESSG 2303



 Score = 28.7 bits (61), Expect = 4.0
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -1

Query: 492  ASEARDSTTTSASPERCGED*ALPIVVTTPG 400
            A+EA + TTTSA  E  GED  +  VV + G
Sbjct: 2336 ATEASEETTTSAVTEGSGEDTTVVAVVESSG 2366



 Score = 28.7 bits (61), Expect = 4.0
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -1

Query: 492  ASEARDSTTTSASPERCGED*ALPIVVTTPG 400
            A+EA + TTTSA  E  GED  +  VV + G
Sbjct: 2716 ATEASEETTTSAVTEGSGEDTTVVAVVESSG 2746



 Score = 27.9 bits (59), Expect = 7.0
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = -1

Query: 492  ASEARDSTTTSASPERCGED*ALPIVVTTPG 400
            A+EA + TTTSA  E  GED  +  VV   G
Sbjct: 2147 ATEASEETTTSAVTEGSGEDTTVVAVVELSG 2177


>AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical
            protein T06D8.1a protein.
          Length = 3719

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -1

Query: 492  ASEARDSTTTSASPERCGED*ALPIVVTTPG 400
            A+EA + TTTSA  E  GED  +  VV + G
Sbjct: 2273 ATEASEETTTSAVTEGSGEDTTVVAVVESSG 2303



 Score = 28.7 bits (61), Expect = 4.0
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -1

Query: 492  ASEARDSTTTSASPERCGED*ALPIVVTTPG 400
            A+EA + TTTSA  E  GED  +  VV + G
Sbjct: 2336 ATEASEETTTSAVTEGSGEDTTVVAVVESSG 2366



 Score = 28.7 bits (61), Expect = 4.0
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -1

Query: 492  ASEARDSTTTSASPERCGED*ALPIVVTTPG 400
            A+EA + TTTSA  E  GED  +  VV + G
Sbjct: 2716 ATEASEETTTSAVTEGSGEDTTVVAVVESSG 2746



 Score = 27.9 bits (59), Expect = 7.0
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = -1

Query: 492  ASEARDSTTTSASPERCGED*ALPIVVTTPG 400
            A+EA + TTTSA  E  GED  +  VV   G
Sbjct: 2147 ATEASEETTTSAVTEGSGEDTTVVAVVELSG 2177


>Z73425-5|CAA97787.1|  427|Caenorhabditis elegans Hypothetical
           protein F12F6.9 protein.
          Length = 427

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 313 GPVEPQNRRRRRGSTWEAGCGKYRSHGPK 399
           GP  P  RR R+G+  ++  G + S GPK
Sbjct: 165 GPSGPPGRRGRKGADGKSAMGGFGSPGPK 193


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,958,197
Number of Sequences: 27780
Number of extensions: 233821
Number of successful extensions: 848
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 848
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)