Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0879
(767 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 120 2e-28
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 91 1e-19
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 89 6e-19
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 79 9e-16
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 77 3e-15
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 75 1e-14
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 73 3e-14
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 67 2e-12
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 48 1e-06
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 48 2e-06
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 47 3e-06
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 46 6e-06
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 43 6e-05
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 41 2e-04
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 40 5e-04
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 39 7e-04
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 34 0.026
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 33 0.059
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 32 0.10
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 31 0.14
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 28 1.7
SPAC3F10.09 |||1-|Schizosaccharomyces pombe|chr 1|||Manual 27 3.9
SPBC119.08 |pmk1|spm1|MAP kinase Pmk1 |Schizosaccharomyces pombe... 26 5.2
SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pom... 26 6.8
SPBC8D2.11 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 6.8
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 25 9.0
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 120 bits (290), Expect = 2e-28
Identities = 57/65 (87%), Positives = 61/65 (93%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSA 434
SGVGKS+LL RFTRNEFN+ESKSTIGVEFATR+I +D K IKAQIWDTAGQERYRAITSA
Sbjct: 19 SGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSA 78
Query: 435 YYRGA 449
YYRGA
Sbjct: 79 YYRGA 83
Score = 117 bits (281), Expect = 2e-27
Identities = 55/85 (64%), Positives = 69/85 (81%)
Frame = +1
Query: 502 GAGLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVE 681
G L+ELR+HAD NI+IMLVGNK+DL HLR++ TEEA+AFA N LSFIETSA+D++NVE
Sbjct: 102 GRWLKELREHADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVE 161
Query: 682 PAFQNILTEIYRIVSQRQMRDPPEG 756
AFQ +LTEI+RIVS R + +G
Sbjct: 162 EAFQTVLTEIFRIVSNRSLEAGDDG 186
Score = 34.7 bits (76), Expect = 0.015
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +1
Query: 208 REDEYDYLFKVVLIGD 255
+EDEYDYLFK VLIGD
Sbjct: 3 QEDEYDYLFKTVLIGD 18
Score = 30.7 bits (66), Expect = 0.24
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +2
Query: 449 VGALLVYDIAKHLSYENVER 508
VGAL+VYDI K S++NV R
Sbjct: 84 VGALIVYDITKQSSFDNVGR 103
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 91.5 bits (217), Expect = 1e-19
Identities = 42/65 (64%), Positives = 51/65 (78%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSA 434
SGVGKS LL RF+ + F +TIG++F R+IE+DGK IK QIWDTAGQER+R IT+A
Sbjct: 18 SGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTA 77
Query: 435 YYRGA 449
YYRGA
Sbjct: 78 YYRGA 82
Score = 51.6 bits (118), Expect = 1e-07
Identities = 23/64 (35%), Positives = 37/64 (57%)
Frame = +1
Query: 520 LRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNI 699
+ HA +N+ +L+GNK D R + E+ +A A+ G+ F+E SA + NV+ AF +
Sbjct: 107 VEQHASENVYKILIGNKCDCEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTL 166
Query: 700 LTEI 711
EI
Sbjct: 167 AREI 170
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 89.0 bits (211), Expect = 6e-19
Identities = 41/65 (63%), Positives = 50/65 (76%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSA 434
SGVGKS LL RF + + STIGV+F R+ E++GKT+K QIWDTAGQER+R ITS+
Sbjct: 17 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQERFRTITSS 76
Query: 435 YYRGA 449
YYRGA
Sbjct: 77 YYRGA 81
Score = 54.4 bits (125), Expect = 2e-08
Identities = 28/67 (41%), Positives = 43/67 (64%)
Frame = +1
Query: 511 LRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAF 690
L+E+ +A + + +LVGNKSD+ + + AK FA++ + F+ETSA DSTNVE AF
Sbjct: 103 LQEIDRYAVEGVNRLLVGNKSDMVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAF 162
Query: 691 QNILTEI 711
+ +I
Sbjct: 163 LTMSRQI 169
Score = 29.1 bits (62), Expect = 0.73
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = +1
Query: 217 EYDYLFKVVLIGD 255
EYDYLFK++LIGD
Sbjct: 4 EYDYLFKLLLIGD 16
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 78.6 bits (185), Expect = 9e-16
Identities = 32/65 (49%), Positives = 49/65 (75%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSA 434
SGVGK+ L+++F +F+ E K+TIG +F T+ + VD K + Q+WDTAGQER++++ A
Sbjct: 17 SGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQERFQSLGMA 76
Query: 435 YYRGA 449
+YRGA
Sbjct: 77 FYRGA 81
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 77.0 bits (181), Expect = 3e-15
Identities = 30/65 (46%), Positives = 50/65 (76%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSA 434
SGVGK+S+++++ +F+ + K+TIG +F T+ + VD K + Q+WDTAGQER++++ A
Sbjct: 17 SGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQERFQSLGVA 76
Query: 435 YYRGA 449
+YRGA
Sbjct: 77 FYRGA 81
Score = 37.1 bits (82), Expect = 0.003
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Frame = +1
Query: 553 MLVGNKSDLRHL-RSIPTEEAKAFAEANG-LSFIETSALDSTNVEPAFQNI 699
+L+GNK D+ R + +A AF +A G + + ETSA ++ NV+ AF+ +
Sbjct: 121 ILLGNKVDVEEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETV 171
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 74.5 bits (175), Expect = 1e-14
Identities = 35/69 (50%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEV----DGKTIKAQIWDTAGQERYRA 422
SG GKS LL RF +N+++ + T+G++FA+R I V K IK QIWDTAGQE++R+
Sbjct: 18 SGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTAGQEKFRS 77
Query: 423 ITSAYYRGA 449
+ YYRGA
Sbjct: 78 VARNYYRGA 86
Score = 48.4 bits (110), Expect = 1e-06
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = +1
Query: 496 ERGAGLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFI-ETSALDST 672
E + L ++R A I ++L G+KSDL++ R + TEEA F +S ETS+ +
Sbjct: 103 ELSSWLSDIRAMAPSTICVVLAGSKSDLQNQRQVSTEEAAEFCSEKHISSAHETSSYTGS 162
Query: 673 NVEPAFQNILTEI 711
NVE F ++++ I
Sbjct: 163 NVEECFLSVVSTI 175
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 73.3 bits (172), Expect = 3e-14
Identities = 33/66 (50%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT-IKAQIWDTAGQERYRAITS 431
S VGKSSL+ RF +++F+ +STIG F T+++ +D T +K +IWDTAGQERY+++
Sbjct: 23 SAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQERYKSLAP 82
Query: 432 AYYRGA 449
YYR A
Sbjct: 83 MYYRNA 88
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 67.3 bits (157), Expect = 2e-12
Identities = 25/61 (40%), Positives = 49/61 (80%)
Frame = +3
Query: 261 VGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYY 440
VGK+SL++RF ++F+ ++TIG++F ++++ ++ +T++ Q+WDTAGQER+R++ +Y
Sbjct: 22 VGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 81
Query: 441 R 443
R
Sbjct: 82 R 82
Score = 41.1 bits (92), Expect = 2e-04
Identities = 21/63 (33%), Positives = 36/63 (57%)
Frame = +1
Query: 511 LRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAF 690
+ ++R +++I+LVGNK+DL R + EE + A+ + +ETSA NV+ F
Sbjct: 106 IEDVRAERGDDVIIVLVGNKTDLADKRQVTQEEGEKKAKELKIMHMETSAKAGHNVKLLF 165
Query: 691 QNI 699
+ I
Sbjct: 166 RKI 168
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 48.0 bits (109), Expect = 1e-06
Identities = 25/62 (40%), Positives = 34/62 (54%)
Frame = +3
Query: 264 GKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYYR 443
GK+SLLS FT F E T+ + + VDGK+++ +WDTAGQE Y + Y
Sbjct: 20 GKTSLLSVFTLGYFPTEYVPTVFENYVS-DCRVDGKSVQLALWDTAGQEEYERLRPMSYA 78
Query: 444 GA 449
A
Sbjct: 79 KA 80
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 47.6 bits (108), Expect = 2e-06
Identities = 28/70 (40%), Positives = 40/70 (57%)
Frame = +1
Query: 550 IMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEIYRIVSQ 729
I++VGNKSDL R++ EE KA A ++ E SA + NV AF+ I++EI +
Sbjct: 114 IVVVGNKSDLHMQRAVTAEEGKALANEWKCAWTEASARHNENVARAFELIISEI-----E 168
Query: 730 RQMRDPPEGD 759
+Q P GD
Sbjct: 169 KQANPSPPGD 178
Score = 37.5 bits (83), Expect = 0.002
Identities = 22/62 (35%), Positives = 33/62 (53%)
Frame = +3
Query: 261 VGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYY 440
VGKSSL ++ N F TI F+ ++I+ G+ +I DTAGQ+ Y + S +
Sbjct: 17 VGKSSLTVQYVENHFVESYYPTIENTFS-KNIKYKGQEFATEIIDTAGQDEYSILNSKHS 75
Query: 441 RG 446
G
Sbjct: 76 IG 77
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 46.8 bits (106), Expect = 3e-06
Identities = 26/59 (44%), Positives = 34/59 (57%)
Frame = +3
Query: 264 GKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYY 440
GK+SLL+ FT+ F + TI E I VDG +I+ +WDTAGQE Y + S Y
Sbjct: 25 GKTSLLNVFTKGYFPQVYEPTI-FENYIHDIFVDGNSIELSLWDTAGQEEYDQLRSLSY 82
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 46.0 bits (104), Expect = 6e-06
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERY 416
S +GK+SL+ + + F+ ES T+GV F ++I + I IWD GQ +
Sbjct: 19 SSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQREF 72
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 42.7 bits (96), Expect = 6e-05
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +3
Query: 258 GVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAY 437
G GK++ + R EF + +T+GVE + I +WDTAGQE+ + Y
Sbjct: 19 GTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQEKLGGLRDGY 78
Query: 438 Y 440
Y
Sbjct: 79 Y 79
Score = 27.1 bits (57), Expect = 3.0
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 538 QNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAF 690
+NI I+L GNK D++ R + +A F L + + SA + N E F
Sbjct: 112 ENIPIVLCGNKVDVKE-RKVKA-KAITFHRKKNLQYYDISAKSNYNFEKPF 160
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 41.1 bits (92), Expect = 2e-04
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +3
Query: 258 GVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAY 437
GVGKS+L + ++ F E TI + + E+DG+ + DTAGQE Y A+ Y
Sbjct: 18 GVGKSALTIQLIQSHFVDEYDPTIEDSYR-KKCEIDGEGALLDVLDTAGQEEYSAMREQY 76
Query: 438 YR 443
R
Sbjct: 77 MR 78
Score = 37.1 bits (82), Expect = 0.003
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +1
Query: 550 IMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEIYR 717
++LV NK DL R + E + A++ ++ETSA NVE AF +++ I R
Sbjct: 116 VVLVANKCDLEAERVVSRAEGEQLAKSMHCLYVETSAKLRLNVEEAFYSLVRTIRR 171
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 39.5 bits (88), Expect = 5e-04
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +3
Query: 264 GKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYY 440
GK+ LL F++ F T+ + +EVDG+ I+ +WDTAGQE Y + Y
Sbjct: 18 GKTCLLIVFSKGTFPEVYVPTVFENYVA-DVEVDGRHIELALWDTAGQEDYDRLRPLSY 75
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 39.1 bits (87), Expect = 7e-04
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = +3
Query: 264 GKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYY 440
GK+ LL F++ F T+ + +EVDG+ ++ +WDTAGQE Y + Y
Sbjct: 18 GKTCLLIVFSKGTFPEVYVPTVFENYVA-DVEVDGRHVELALWDTAGQEDYDRLRPLSY 75
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 33.9 bits (74), Expect = 0.026
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +3
Query: 258 GVGKSSLLSRFTRNEFNLESKSTIGVEFATR-SIEVDGKTIKAQIWDTAGQERYRAITSA 434
G GK+ LL F+ F T+ + T + + K I+ +WDTAGQE Y +
Sbjct: 24 GCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQEEYDRLRPL 83
Query: 435 YY 440
Y
Sbjct: 84 SY 85
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 32.7 bits (71), Expect = 0.059
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +3
Query: 264 GKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYYR 443
GK+++L + N+ ++ + T+G T V K IK +WD GQ++ R + Y+
Sbjct: 33 GKTTILYKLKLNQ-SVVTIPTVGFNVET----VTYKNIKFNVWDVGGQDKIRPLWRHYFT 87
Query: 444 G 446
G
Sbjct: 88 G 88
Score = 29.9 bits (64), Expect = 0.42
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +1
Query: 619 FAEANGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQMRD 744
F GL F+ SA DS + A Q E++RI+S R+MRD
Sbjct: 86 FTGTKGLIFVVDSA-DSNRISEARQ----ELHRIISDREMRD 122
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 31.9 bits (69), Expect = 0.10
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +3
Query: 261 VGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYY 440
VGK+ LL +T N+F + T+ +A ++ + + ++DTAGQE Y + Y
Sbjct: 14 VGKTCLLISYTTNKFPSDYVPTVFDNYAV-TVMIGDEPYTLGLFDTAGQEDYDRLRPLSY 72
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 31.5 bits (68), Expect = 0.14
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +3
Query: 264 GKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYYR 443
GK+++L + N E T G F R++EV+G ++ IWD GQ+ R Y+
Sbjct: 28 GKTTILKCLLNEDVN-EVSPTFG--FQIRTLEVEG--LRFTIWDIGGQKTLRNFWKNYFE 82
Query: 444 GAWA 455
A
Sbjct: 83 STEA 86
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 27.9 bits (59), Expect = 1.7
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +3
Query: 264 GKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYYR 443
GK+++L + E + + TIG T V+ + I +WD GQ++ R + Y++
Sbjct: 29 GKTTILYKLKLGEI-VTTIPTIGFNVET----VEYRNISFTVWDVGGQDKIRPLWRHYFQ 83
>SPAC3F10.09 |||1-|Schizosaccharomyces pombe|chr 1|||Manual
Length = 264
Score = 26.6 bits (56), Expect = 3.9
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 249 WRSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDG 368
W + + K +++ F NE NL+ S EF + +V+G
Sbjct: 147 WFAAINKWQVMTAFELNEENLDLLSQYCSEFLIHAADVEG 186
>SPBC119.08 |pmk1|spm1|MAP kinase Pmk1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 422
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 303 IHF**NATEDCFYPHQISNEYNFEQIIIF 217
IHF + C Y I N YNF ++ I+
Sbjct: 75 IHFRNHRNITCIYDLDIINPYNFNEVYIY 103
>SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 25.8 bits (54), Expect = 6.8
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 252 RSGVGKSSLLSRFTRNEFNLESKSTI 329
R+G+GKS+LL +R E + + TI
Sbjct: 216 RNGIGKSTLLRALSRREIAIPTHITI 241
>SPBC8D2.11 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 122
Score = 25.8 bits (54), Expect = 6.8
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 499 VLVRQVLGDIVHEQRAHAPR 440
VLVR+V G +RAH PR
Sbjct: 65 VLVREVAGSFRQRKRAHMPR 84
>SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1079
Score = 25.4 bits (53), Expect = 9.0
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 759 VTLGRVAHLPLRHDPVD 709
+ LGRVA L + H PVD
Sbjct: 990 IELGRVASLEMNHKPVD 1006
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,807,750
Number of Sequences: 5004
Number of extensions: 53841
Number of successful extensions: 184
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 180
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 369323696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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