Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0879
         (767 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            81   3e-17
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    37   6e-04
CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    24   5.9  
AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            24   5.9  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   5.9  
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    23   7.9  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 81.4 bits (192), Expect = 3e-17
 Identities = 40/86 (46%), Positives = 54/86 (62%), Gaps = 3/86 (3%)
 Frame = +3

Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSA 434
           S VGKSSL+ RF + +F+   +STIG  F T+++ +D  T+K +IWDTAGQERY ++   
Sbjct: 33  SAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQERYHSLAPM 92

Query: 435 YYRGAWARC---SCTISPSTCRTRTW 503
           YYRGA A         S S  R +TW
Sbjct: 93  YYRGAQAAIVVYDIQNSDSFARAKTW 118



 Score = 56.4 bits (130), Expect = 9e-10
 Identities = 29/67 (43%), Positives = 42/67 (62%)
 Frame = +1

Query: 511 LRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAF 690
           ++EL+  A  NI+I L GNK+DL + R +  EEAK +A+ N L F+ETSA  + NV   F
Sbjct: 119 VKELQRQASPNIVIALAGNKADLANSRVVDYEEAKQYADDNRLLFMETSAKTAVNVNDIF 178

Query: 691 QNILTEI 711
             I  ++
Sbjct: 179 LAIAKKL 185


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 37.1 bits (82), Expect = 6e-04
 Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
 Frame = +3

Query: 261 VGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYY 440
           VGK+ +L  +T + F  E   T    ++   + VDG  +   +WDTAGQE Y  +    Y
Sbjct: 17  VGKTCMLISYTTDSFPGEYVPTSFDNYSAPMV-VDGVQVSLGLWDTAGQEDYDRLRPLSY 75

Query: 441 --RGAWARCSCTISPST 485
                +  C    SPS+
Sbjct: 76  PQTDVFLICYSVASPSS 92


>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
           protein.
          Length = 420

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +2

Query: 410 AVPRHHVGV-LPRRVGALLVYDIAKHLSYENVERGCASCAT 529
           A+  +  G+ L +   AL +   A HL+ EN +R    C+T
Sbjct: 302 AISAYSAGIRLTKDYYALFLNRSAAHLALENYQRCAEDCST 342


>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +2

Query: 410 AVPRHHVGV-LPRRVGALLVYDIAKHLSYENVERGCASCAT 529
           A+  +  G+ L +   AL +   A HL+ EN +R    C+T
Sbjct: 302 AISAYSAGIRLTKDYYALFLNRSAAHLALENYQRCAEDCST 342


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 682 PAFQNILTEIYRIVSQRQMRDPPEGDVS 765
           PA + +  E  RI  QRQ+  P + D+S
Sbjct: 299 PAIEELENEC-RIAEQRQLASPTDPDIS 325


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -2

Query: 379 FMVLPSTSILLVANSTPMVDLDSKLNSFLV 290
           F +L    +L++  + P+V  D  LN F +
Sbjct: 493 FHLLAGQPLLIIGTTGPLVLFDEALNQFCI 522


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 711,767
Number of Sequences: 2352
Number of extensions: 13803
Number of successful extensions: 24
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)