Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0879
(767 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 129 2e-30
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 127 8e-30
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 105 3e-23
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 93 3e-19
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 92 5e-19
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 92 5e-19
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 92 5e-19
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 91 8e-19
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 87 1e-17
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 85 5e-17
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 85 5e-17
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 84 1e-16
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 84 1e-16
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 81 1e-15
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 79 3e-15
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 77 1e-14
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 76 2e-14
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 76 2e-14
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 76 2e-14
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 76 2e-14
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 76 2e-14
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 76 2e-14
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 76 3e-14
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 76 3e-14
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 73 2e-13
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 69 3e-12
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 69 3e-12
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 69 3e-12
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 69 4e-12
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 69 5e-12
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 67 1e-11
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 66 2e-11
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 66 3e-11
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 66 3e-11
U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like prot... 65 5e-11
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 65 5e-11
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 65 6e-11
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 64 8e-11
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 64 8e-11
U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein. 64 1e-10
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 62 3e-10
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 62 4e-10
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 62 4e-10
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 58 5e-09
U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like prot... 56 3e-08
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 50 2e-06
U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein. 49 3e-06
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 48 7e-06
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 46 4e-05
Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical pr... 46 4e-05
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 46 4e-05
U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein. 44 1e-04
Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical pr... 44 2e-04
U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding pro... 44 2e-04
Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein. 43 2e-04
X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-relat... 43 3e-04
L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein pr... 43 3e-04
L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein pr... 43 3e-04
AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse e... 43 3e-04
AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death a... 43 3e-04
U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein. 42 4e-04
U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey... 42 4e-04
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 42 4e-04
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 42 4e-04
AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death a... 42 4e-04
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 42 5e-04
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 42 5e-04
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 42 5e-04
U50301-3|AAM29676.1| 370|Caenorhabditis elegans Hypothetical pr... 42 5e-04
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 42 5e-04
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 42 6e-04
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 41 8e-04
Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical pr... 41 0.001
U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase... 41 0.001
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 40 0.002
U41276-1|AAA82469.1| 238|Caenorhabditis elegans Hypothetical pr... 40 0.003
CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical ... 39 0.005
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 39 0.005
AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical ... 38 0.006
U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein. 36 0.024
U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical p... 36 0.024
L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleot... 36 0.024
S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog p... 36 0.032
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 35 0.055
U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein. 35 0.055
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 35 0.055
AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical ... 34 0.097
U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like prot... 33 0.17
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 33 0.22
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 33 0.22
U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylatio... 33 0.30
U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein. 33 0.30
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 32 0.39
AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical ... 32 0.52
U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific ... 31 1.2
U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein. 29 2.8
AL031633-14|CAA21032.1| 903|Caenorhabditis elegans Hypothetical... 29 2.8
AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical... 29 2.8
AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical... 29 2.8
AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gam... 29 2.8
AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gam... 29 2.8
U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 29 3.6
AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 29 3.6
AF192746-1|AAF08804.1| 401|Caenorhabditis elegans synapsin prot... 29 3.6
AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 29 3.6
AC006743-3|AAF60504.2| 401|Caenorhabditis elegans Synapsin prot... 29 3.6
AC006743-2|AAM97971.1| 474|Caenorhabditis elegans Synapsin prot... 29 3.6
Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical p... 29 4.8
AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical ... 28 6.4
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 129 bits (312), Expect = 2e-30
Identities = 61/65 (93%), Positives = 64/65 (98%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSA 434
SGVGKS+LLSRFTRNEFNLESKSTIGVEFATRSI V+GKT+KAQIWDTAGQERYRAITSA
Sbjct: 20 SGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQERYRAITSA 79
Query: 435 YYRGA 449
YYRGA
Sbjct: 80 YYRGA 84
Score = 125 bits (302), Expect = 3e-29
Identities = 60/82 (73%), Positives = 70/82 (85%)
Frame = +1
Query: 511 LRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAF 690
L+ELRDHADQNI+IMLVGNKSDLRHLR++PT+EAK +AE N LSFIETSALDSTNVE AF
Sbjct: 106 LKELRDHADQNIVIMLVGNKSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAF 165
Query: 691 QNILTEIYRIVSQRQMRDPPEG 756
NILTEIY+ VS + + +G
Sbjct: 166 TNILTEIYKSVSNKHVGTDRQG 187
Score = 41.9 bits (94), Expect = 5e-04
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +2
Query: 449 VGALLVYDIAKHLSYENVER 508
VGALLVYDIAKH++YENVER
Sbjct: 85 VGALLVYDIAKHVTYENVER 104
Score = 41.5 bits (93), Expect = 6e-04
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +1
Query: 199 MGTREDEYDYLFKVVLIGD 255
MG+R+DEYDYLFKVVLIGD
Sbjct: 1 MGSRDDEYDYLFKVVLIGD 19
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 127 bits (307), Expect = 8e-30
Identities = 60/65 (92%), Positives = 64/65 (98%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSA 434
SGVGKS+LLSRFTRNEF+LESKSTIGVEFATRSI V+GKT+KAQIWDTAGQERYRAITSA
Sbjct: 20 SGVGKSNLLSRFTRNEFHLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQERYRAITSA 79
Query: 435 YYRGA 449
YYRGA
Sbjct: 80 YYRGA 84
Score = 41.9 bits (94), Expect = 5e-04
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +2
Query: 449 VGALLVYDIAKHLSYENVER 508
VGALLVYDIAKH++YENVER
Sbjct: 85 VGALLVYDIAKHVTYENVER 104
Score = 41.5 bits (93), Expect = 6e-04
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +1
Query: 199 MGTREDEYDYLFKVVLIGD 255
MG+R+DEYDYLFKVVLIGD
Sbjct: 1 MGSRDDEYDYLFKVVLIGD 19
Score = 41.1 bits (92), Expect = 8e-04
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +1
Query: 511 LRELRDHADQNILIMLVGNKSD 576
L+ELRDHADQNI+IM VGNK D
Sbjct: 106 LKELRDHADQNIVIMPVGNKCD 127
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 105 bits (252), Expect = 3e-23
Identities = 48/64 (75%), Positives = 55/64 (85%)
Frame = +3
Query: 258 GVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAY 437
GVGKS+LLSRFTRNEFNL+SK TIGVEFAT+ I V+GK +K QIWDTAG ER+R S+Y
Sbjct: 18 GVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIWDTAGMERFRCGASSY 77
Query: 438 YRGA 449
YRGA
Sbjct: 78 YRGA 81
Score = 101 bits (243), Expect = 4e-22
Identities = 48/74 (64%), Positives = 64/74 (86%)
Frame = +1
Query: 511 LRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAF 690
L+ LRDHA+++I+I LVGNKSDL H ++PT+EAK +AE N +SFIETSALD+TNVE AF
Sbjct: 103 LKVLRDHANEDIVITLVGNKSDLSH--AVPTDEAKIYAERNHISFIETSALDNTNVEAAF 160
Query: 691 QNILTEIYRIVSQR 732
NI+TEIY++VS++
Sbjct: 161 TNIVTEIYKLVSEK 174
Score = 34.7 bits (76), Expect = 0.073
Identities = 14/20 (70%), Positives = 19/20 (95%)
Frame = +2
Query: 449 VGALLVYDIAKHLSYENVER 508
+GALLVYDI+KH +YE+VE+
Sbjct: 82 LGALLVYDISKHKTYESVEQ 101
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 92.7 bits (220), Expect = 3e-19
Identities = 44/65 (67%), Positives = 51/65 (78%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSA 434
SGVGKS LL RF + + STIGV+F R+IE+DGKTIK QIWDTAGQER+R ITS+
Sbjct: 20 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSS 79
Query: 435 YYRGA 449
YYRGA
Sbjct: 80 YYRGA 84
Score = 59.3 bits (137), Expect = 3e-09
Identities = 30/67 (44%), Positives = 45/67 (67%)
Frame = +1
Query: 511 LRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAF 690
L+E+ +A +N+ +LVGNK DL R++ T+ A+ +A G+ F+ETSA STNVE AF
Sbjct: 106 LQEIDRYACENVNKLLVGNKCDLTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAF 165
Query: 691 QNILTEI 711
+ +EI
Sbjct: 166 LTMASEI 172
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 199 MGTREDEYDYLFKVVLIGD 255
M EYDYLFK++LIGD
Sbjct: 1 MAAMNPEYDYLFKLLLIGD 19
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 91.9 bits (218), Expect = 5e-19
Identities = 42/65 (64%), Positives = 52/65 (80%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSA 434
SGVGK+ +L RF+ + FN STIG++F R+IE+DGK IK QIWDTAGQER+R IT+A
Sbjct: 17 SGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTA 76
Query: 435 YYRGA 449
YYRGA
Sbjct: 77 YYRGA 81
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 91.9 bits (218), Expect = 5e-19
Identities = 42/65 (64%), Positives = 52/65 (80%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSA 434
SGVGK+ +L RF+ + FN STIG++F R+IE+DGK IK QIWDTAGQER+R IT+A
Sbjct: 17 SGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTA 76
Query: 435 YYRGA 449
YYRGA
Sbjct: 77 YYRGA 81
Score = 52.0 bits (119), Expect = 5e-07
Identities = 23/77 (29%), Positives = 42/77 (54%)
Frame = +1
Query: 511 LRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAF 690
+R + +HA ++ M++GNK D+ R + + + A G F+ETSA + N++ AF
Sbjct: 103 IRNIEEHAASDVERMIIGNKCDIEERREVSRDRGEQLAIEYGTKFLETSAKANLNIDEAF 162
Query: 691 QNILTEIYRIVSQRQMR 741
+ +I + Q +MR
Sbjct: 163 FTLARDIKSKMEQNEMR 179
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 91.9 bits (218), Expect = 5e-19
Identities = 42/65 (64%), Positives = 52/65 (80%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSA 434
SGVGK+ +L RF+ + FN STIG++F R+IE+DGK IK QIWDTAGQER+R IT+A
Sbjct: 17 SGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTA 76
Query: 435 YYRGA 449
YYRGA
Sbjct: 77 YYRGA 81
Score = 52.0 bits (119), Expect = 5e-07
Identities = 23/77 (29%), Positives = 42/77 (54%)
Frame = +1
Query: 511 LRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAF 690
+R + +HA ++ M++GNK D+ R + + + A G F+ETSA + N++ AF
Sbjct: 103 IRNIEEHAASDVERMIIGNKCDIEERREVSRDRGEQLAIEYGTKFLETSAKANLNIDEAF 162
Query: 691 QNILTEIYRIVSQRQMR 741
+ +I + Q +MR
Sbjct: 163 FTLARDIKSKMEQNEMR 179
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 91.1 bits (216), Expect = 8e-19
Identities = 42/64 (65%), Positives = 49/64 (76%)
Frame = +3
Query: 258 GVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAY 437
GVGKS LL +FT +F + TIGVEF TR IEV G+ IK QIWDTAGQER+RA+T +Y
Sbjct: 21 GVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSY 80
Query: 438 YRGA 449
YRGA
Sbjct: 81 YRGA 84
Score = 68.9 bits (161), Expect = 4e-12
Identities = 33/69 (47%), Positives = 44/69 (63%)
Frame = +1
Query: 511 LRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAF 690
L + + + N I L+GNK+DL R +P EEAKAFAE NGL+F+E SA +NVE AF
Sbjct: 106 LADAKSLTNPNTAIFLIGNKADLEDQRDVPYEEAKAFAEENGLTFLECSAKTGSNVEDAF 165
Query: 691 QNILTEIYR 717
+IY+
Sbjct: 166 LETAKQIYQ 174
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 87.0 bits (206), Expect = 1e-17
Identities = 39/64 (60%), Positives = 50/64 (78%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSA 434
SGVGKSSLL RF N F+ +TIGV+F R+++++G+ +K QIWDTAGQER+R ITS
Sbjct: 19 SGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIWDTAGQERFRTITST 78
Query: 435 YYRG 446
YYRG
Sbjct: 79 YYRG 82
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/60 (36%), Positives = 38/60 (63%)
Frame = +1
Query: 511 LRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAF 690
L+E+ ++ D ++ +LVGNK + R + +A+ +A++ +SF ETSA + NVEP F
Sbjct: 105 LQEIENNCD-SVQKVLVGNKCEENERRVVLESDARNYAQSMNISFFETSAKEDKNVEPMF 163
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 85.0 bits (201), Expect = 5e-17
Identities = 38/65 (58%), Positives = 50/65 (76%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSA 434
SGVGK+ +L RF+ + FN STIG++F ++IE+ GK IK QIWDTAGQER+ IT++
Sbjct: 18 SGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQERFHTITTS 77
Query: 435 YYRGA 449
YYRGA
Sbjct: 78 YYRGA 82
Score = 50.8 bits (116), Expect = 1e-06
Identities = 23/67 (34%), Positives = 42/67 (62%)
Frame = +1
Query: 511 LRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAF 690
LR + +HA ++++ M++GNK D+ R + E + A+ +G+SF ETSA + +V+ AF
Sbjct: 104 LRNIDEHASEDVVKMILGNKCDMSDRRVVSRERGEKIAQDHGISFHETSAKLNVHVDTAF 163
Query: 691 QNILTEI 711
++ I
Sbjct: 164 YDLAEAI 170
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 85.0 bits (201), Expect = 5e-17
Identities = 38/65 (58%), Positives = 50/65 (76%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSA 434
SGVGK+ +L RF+ + FN STIG++F ++IE+ GK IK QIWDTAGQER+ IT++
Sbjct: 18 SGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQERFHTITTS 77
Query: 435 YYRGA 449
YYRGA
Sbjct: 78 YYRGA 82
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 83.8 bits (198), Expect = 1e-16
Identities = 39/65 (60%), Positives = 46/65 (70%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSA 434
+GVGKS LL +FT F TIGVEF R + +DGK IK QIWDTAGQE +R+IT +
Sbjct: 15 TGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQIWDTAGQESFRSITRS 74
Query: 435 YYRGA 449
YYRGA
Sbjct: 75 YYRGA 79
Score = 74.5 bits (175), Expect = 7e-14
Identities = 35/73 (47%), Positives = 49/73 (67%)
Frame = +1
Query: 511 LRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAF 690
L + R H++ N++IML+GNKSDL R + EE +AFA +GL F+ETSA + NVE AF
Sbjct: 101 LEDARQHSNSNMVIMLIGNKSDLEARREVKREEGEAFAREHGLVFMETSAKTAANVEEAF 160
Query: 691 QNILTEIYRIVSQ 729
+ EIYR + +
Sbjct: 161 IDTAKEIYRKIQE 173
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 83.8 bits (198), Expect = 1e-16
Identities = 37/65 (56%), Positives = 48/65 (73%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSA 434
SGVGKSSL+ RF + F+ E +TIGV+F S+ +DG +K IWDTAGQER+R +T +
Sbjct: 20 SGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQERFRTLTPS 79
Query: 435 YYRGA 449
YYRGA
Sbjct: 80 YYRGA 84
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 80.6 bits (190), Expect = 1e-15
Identities = 32/65 (49%), Positives = 50/65 (76%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSA 434
SGVGK+SL++++ F+ + K+TIG +F TR + +D +T+ QIWDTAGQER++++ A
Sbjct: 18 SGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRTVTLQIWDTAGQERFQSLGVA 77
Query: 435 YYRGA 449
+YRGA
Sbjct: 78 FYRGA 82
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 79.0 bits (186), Expect = 3e-15
Identities = 36/67 (53%), Positives = 48/67 (71%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSA 434
S VGKSSL+ RF + +F+ +STIG F T+++ +D TIK +IWDTAGQERY ++
Sbjct: 28 SAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAGQERYHSLAPM 87
Query: 435 YYRGAWA 455
YYRGA A
Sbjct: 88 YYRGAQA 94
Score = 58.8 bits (136), Expect = 4e-09
Identities = 29/67 (43%), Positives = 43/67 (64%)
Frame = +1
Query: 511 LRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAF 690
++EL+ A NI++ L GNK+D+ + R++ EEA A+AE N L F+ETSA S NV F
Sbjct: 114 VKELQRQASPNIVMALAGNKADVANKRTVEYEEANAYAEDNALLFMETSAKTSMNVNDIF 173
Query: 691 QNILTEI 711
I ++
Sbjct: 174 MAIAKKL 180
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 77.4 bits (182), Expect = 1e-14
Identities = 36/69 (52%), Positives = 50/69 (72%)
Frame = +1
Query: 511 LRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAF 690
L +LR H ++IML+GNKSDL+ +R + TEE +AFA+ NGL+F+ETSA + +VE AF
Sbjct: 101 LSDLRQHGHPEMVIMLIGNKSDLKAVRDVTTEEGEAFAKKNGLTFMETSAKANKHVEKAF 160
Query: 691 QNILTEIYR 717
N EIY+
Sbjct: 161 VNTAHEIYK 169
Score = 70.1 bits (164), Expect = 2e-12
Identities = 33/78 (42%), Positives = 49/78 (62%)
Frame = +3
Query: 258 GVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAY 437
GVGKS+LL RFT F+ +T+GVEF + +++D ++ ++WDT GQE +R+I AY
Sbjct: 16 GVGKSNLLLRFTDELFDPIHTTTLGVEFGYKDLQIDKYKVRLRVWDTCGQENFRSIIRAY 75
Query: 438 YRGAWARCSCTISPSTCR 491
YR A + + TCR
Sbjct: 76 YRNALG--ALLVYDITCR 91
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 76.2 bits (179), Expect = 2e-14
Identities = 34/65 (52%), Positives = 45/65 (69%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSA 434
S VGK+S L R+ + F ST+G++F +++ K +K QIWDTAGQERYR IT+A
Sbjct: 31 SSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTA 90
Query: 435 YYRGA 449
YYRGA
Sbjct: 91 YYRGA 95
Score = 48.4 bits (110), Expect = 6e-06
Identities = 22/79 (27%), Positives = 46/79 (58%)
Frame = +1
Query: 517 ELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQN 696
+++ ++ +N ++LVGNK D+ R + + + A+ GL F ETSA ++ NV+ F+
Sbjct: 119 QIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLADQLGLEFFETSAKENINVKAVFEK 178
Query: 697 ILTEIYRIVSQRQMRDPPE 753
++ I +++ +DP +
Sbjct: 179 LVEIICDKMAESLDKDPQQ 197
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 76.2 bits (179), Expect = 2e-14
Identities = 34/65 (52%), Positives = 45/65 (69%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSA 434
S VGK+S L R+ + F ST+G++F +++ K +K QIWDTAGQERYR IT+A
Sbjct: 31 SSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTA 90
Query: 435 YYRGA 449
YYRGA
Sbjct: 91 YYRGA 95
Score = 48.4 bits (110), Expect = 6e-06
Identities = 22/79 (27%), Positives = 46/79 (58%)
Frame = +1
Query: 517 ELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQN 696
+++ ++ +N ++LVGNK D+ R + + + A+ GL F ETSA ++ NV+ F+
Sbjct: 119 QIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLADQLGLEFFETSAKENINVKAVFEK 178
Query: 697 ILTEIYRIVSQRQMRDPPE 753
++ I +++ +DP +
Sbjct: 179 LVEIICDKMAESLDKDPQQ 197
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 76.2 bits (179), Expect = 2e-14
Identities = 34/65 (52%), Positives = 45/65 (69%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSA 434
S VGK+S L R+ + F ST+G++F +++ K +K QIWDTAGQERYR IT+A
Sbjct: 31 SSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTA 90
Query: 435 YYRGA 449
YYRGA
Sbjct: 91 YYRGA 95
Score = 48.4 bits (110), Expect = 6e-06
Identities = 22/79 (27%), Positives = 46/79 (58%)
Frame = +1
Query: 517 ELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQN 696
+++ ++ +N ++LVGNK D+ R + + + A+ GL F ETSA ++ NV+ F+
Sbjct: 119 QIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLADQLGLEFFETSAKENINVKAVFEK 178
Query: 697 ILTEIYRIVSQRQMRDPPE 753
++ I +++ +DP +
Sbjct: 179 LVEIICDKMAESLDKDPQQ 197
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 76.2 bits (179), Expect = 2e-14
Identities = 34/65 (52%), Positives = 45/65 (69%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSA 434
S VGK+S L R+ + F ST+G++F +++ K +K QIWDTAGQERYR IT+A
Sbjct: 45 SSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTA 104
Query: 435 YYRGA 449
YYRGA
Sbjct: 105 YYRGA 109
Score = 48.4 bits (110), Expect = 6e-06
Identities = 22/79 (27%), Positives = 46/79 (58%)
Frame = +1
Query: 517 ELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQN 696
+++ ++ +N ++LVGNK D+ R + + + A+ GL F ETSA ++ NV+ F+
Sbjct: 133 QIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLADQLGLEFFETSAKENINVKAVFEK 192
Query: 697 ILTEIYRIVSQRQMRDPPE 753
++ I +++ +DP +
Sbjct: 193 LVEIICDKMAESLDKDPQQ 211
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 76.2 bits (179), Expect = 2e-14
Identities = 33/64 (51%), Positives = 44/64 (68%)
Frame = +3
Query: 258 GVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAY 437
GVGK+ ++ RF F +TIGV+F +++ VDGK +K QIWDT GQER+R IT +Y
Sbjct: 20 GVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQIWDTGGQERFRTITQSY 79
Query: 438 YRGA 449
YR A
Sbjct: 80 YRSA 83
Score = 48.0 bits (109), Expect = 7e-06
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +1
Query: 532 ADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGL-SFIETSALDSTNVEPAFQNILTE 708
A N++ +L+G K DL R+I EEA+ ANG+ + +ETSA + NV+ AF + T
Sbjct: 112 AAPNVVKLLIGTKCDLEDQRAIEAEEAEMLQRANGMFAMLETSAKGNVNVDNAFLELATI 171
Query: 709 IYRIVSQ 729
+ R Q
Sbjct: 172 LKRQYDQ 178
Score = 30.3 bits (65), Expect = 1.6
Identities = 10/16 (62%), Positives = 15/16 (93%)
Frame = +1
Query: 211 EDEYDYLFKVVLIGDL 258
+D +DYLFK+VL+GD+
Sbjct: 4 DDGFDYLFKIVLVGDM 19
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 76.2 bits (179), Expect = 2e-14
Identities = 34/65 (52%), Positives = 45/65 (69%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSA 434
S VGK+S L R+ + F ST+G++F +++ K +K QIWDTAGQERYR IT+A
Sbjct: 31 SSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTA 90
Query: 435 YYRGA 449
YYRGA
Sbjct: 91 YYRGA 95
Score = 48.4 bits (110), Expect = 6e-06
Identities = 22/79 (27%), Positives = 46/79 (58%)
Frame = +1
Query: 517 ELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQN 696
+++ ++ +N ++LVGNK D+ R + + + A+ GL F ETSA ++ NV+ F+
Sbjct: 119 QIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLADQLGLEFFETSAKENINVKAVFEK 178
Query: 697 ILTEIYRIVSQRQMRDPPE 753
++ I +++ +DP +
Sbjct: 179 LVEIICDKMAESLDKDPQQ 197
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 75.8 bits (178), Expect = 3e-14
Identities = 32/64 (50%), Positives = 45/64 (70%)
Frame = +3
Query: 258 GVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAY 437
GVGKS+LL RF F+ ST+G+EF R++E+D K +K +WDT GQER+R++ +Y
Sbjct: 16 GVGKSNLLLRFIGKPFDSIHPSTLGIEFGFRNLEIDRKKVKLHVWDTCGQERFRSLVGSY 75
Query: 438 YRGA 449
YR A
Sbjct: 76 YRHA 79
Score = 60.1 bits (139), Expect = 2e-09
Identities = 33/69 (47%), Positives = 43/69 (62%)
Frame = +1
Query: 511 LRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAF 690
L +L+ D +I+I+L+GNKSDL R + EE +AFA GL F+E SA + VE AF
Sbjct: 101 LTDLQRLGDPDIVIVLIGNKSDLEADREVRKEEGEAFAREFGLIFMEISAKTNEYVEEAF 160
Query: 691 QNILTEIYR 717
N EIYR
Sbjct: 161 VNSAHEIYR 169
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 75.8 bits (178), Expect = 3e-14
Identities = 34/67 (50%), Positives = 48/67 (71%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSA 434
+GVGK+ L+ +FT+ F +TIGV+F ++++V IK QIWDTAGQER+R+IT +
Sbjct: 16 AGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVGNDKIKLQIWDTAGQERFRSITQS 75
Query: 435 YYRGAWA 455
YYR A A
Sbjct: 76 YYRSAHA 82
Score = 54.4 bits (125), Expect = 8e-08
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +1
Query: 511 LRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLS-FIETSALDSTNVEPA 687
L E+ +A++ +L +LVGNK D R +P + F++ N F+ETSALD+TNV+
Sbjct: 102 LGEIESYANRRVLKILVGNKVDKGDEREVPERIGRDFSDVNQFDYFLETSALDATNVDQL 161
Query: 688 FQNILTEI 711
F+ + T +
Sbjct: 162 FEQVATRL 169
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 72.9 bits (171), Expect = 2e-13
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSA 434
+ VGKSS + R R +F + ST+GV+F +++ VDG+ + Q+WDTAGQER+R++ +
Sbjct: 470 AAVGKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVNVDGRNVALQLWDTAGQERFRSLCKS 529
Query: 435 YYR---GAWARCSCTISPSTCRTRTW 503
Y+R GA S R R W
Sbjct: 530 YFRRADGAILVYDVCAEQSFLRVRDW 555
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Frame = +1
Query: 511 LRELRDHADQNILIMLVGNKSDLRHLR--SIPTEEAKAFAEANGLSFIETSALDSTNVEP 684
+ +++ +++I I+LVGNK D+R S+ + + A A G+ F+ETSALD +N++
Sbjct: 556 IETIKESTERSIPIILVGNKVDMRISTPGSVAKTDGASMAAAMGVLFMETSALDGSNIDN 615
Query: 685 AFQNILTEIYRI 720
A + E+ +
Sbjct: 616 AMLALTRELMAV 627
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 69.3 bits (162), Expect = 3e-12
Identities = 32/67 (47%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Frame = +3
Query: 258 GVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT-IKAQIWDTAGQERYRAITSA 434
GVGK+S++ RF N F+ K+TIGV+FA + + VD T + QIWD +GQ+RY +T
Sbjct: 21 GVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIWDISGQDRYGVMTRV 80
Query: 435 YYRGAWA 455
YY+ A A
Sbjct: 81 YYKDAHA 87
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 69.3 bits (162), Expect = 3e-12
Identities = 34/66 (51%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEV-DGKTIKAQIWDTAGQERYRAITS 431
S VGKSSLL FT + S T+GV+F R IE+ G +K Q+WDTAGQE++R+IT
Sbjct: 26 STVGKSSLLRYFTEGKMAEISDPTVGVDFYARMIELRPGYRVKLQLWDTAGQEKFRSITK 85
Query: 432 AYYRGA 449
+YYR +
Sbjct: 86 SYYRNS 91
Score = 47.6 bits (108), Expect = 1e-05
Identities = 27/70 (38%), Positives = 38/70 (54%)
Frame = +1
Query: 547 LIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEIYRIVS 726
+ LVG KSD+ R + EE + FA+ + + FIETS+ NV AF I EI V
Sbjct: 129 VFQLVGTKSDMDSQRQVNYEEGEYFAKYHKMKFIETSSRTGDNVNEAFHMIAQEIQNRVD 188
Query: 727 QRQMRDPPEG 756
++R P +G
Sbjct: 189 DGELR-PVDG 197
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 69.3 bits (162), Expect = 3e-12
Identities = 32/67 (47%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Frame = +3
Query: 258 GVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT-IKAQIWDTAGQERYRAITSA 434
GVGK+S++ RF N F+ K+TIGV+FA + + VD T + QIWD +GQ+RY +T
Sbjct: 21 GVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIWDISGQDRYGVMTRV 80
Query: 435 YYRGAWA 455
YY+ A A
Sbjct: 81 YYKDAHA 87
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 68.9 bits (161), Expect = 4e-12
Identities = 29/55 (52%), Positives = 39/55 (70%)
Frame = +3
Query: 285 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYYRGA 449
RF + F+ E +TIGV+F S+ +DG +K IWDTAGQER+R +T +YYRGA
Sbjct: 3 RFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQERFRTLTPSYYRGA 57
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 68.5 bits (160), Expect = 5e-12
Identities = 30/66 (45%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEV-DGKTIKAQIWDTAGQERYRAITS 431
SG GK++LL+ F N F + +TIG++F + +++ DG++I+ Q+WDTAGQER+R +
Sbjct: 15 SGAGKTALLTCFLDNTFETDPLTTIGIDFKHKIVQLNDGQSIRLQLWDTAGQERFRQLAP 74
Query: 432 AYYRGA 449
AY R A
Sbjct: 75 AYIRSA 80
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 67.3 bits (157), Expect = 1e-11
Identities = 28/62 (45%), Positives = 42/62 (67%)
Frame = +3
Query: 264 GKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYYR 443
GKS +L RF N F ++ ST+GV+F ++I++ I+ ++WDTAG ERYR I ++YY
Sbjct: 18 GKSCILLRFAENSFRMDHISTLGVDFKLKTIKLGRDKIRLELWDTAGMERYRTIYNSYYH 77
Query: 444 GA 449
A
Sbjct: 78 SA 79
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/83 (31%), Positives = 41/83 (49%)
Frame = +1
Query: 511 LRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAF 690
L+E++ HA N ++MLVGNK+D+ R + + A+ A G+S E SA N E AF
Sbjct: 102 LKEIKQHAPPNAVLMLVGNKADMDQERKVDFDRAEKLASRLGVSLYEVSAKTGINCEEAF 161
Query: 691 QNILTEIYRIVSQRQMRDPPEGD 759
+ + ++ M D
Sbjct: 162 HTLTAAMRERITAGSMHSDESDD 184
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 66.5 bits (155), Expect = 2e-11
Identities = 25/61 (40%), Positives = 48/61 (78%)
Frame = +3
Query: 261 VGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYY 440
VGK+SL++RF + F+ ++TIG++F ++++ ++ +T++ Q+WDTAGQER+R++ +Y
Sbjct: 21 VGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 80
Query: 441 R 443
R
Sbjct: 81 R 81
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/77 (33%), Positives = 42/77 (54%)
Frame = +1
Query: 517 ELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQN 696
++R +++IMLVGNK+DL R + T+E + A+ + FIETSA NV+ F+
Sbjct: 107 DVRTERGSDVIIMLVGNKTDLSDKRQVTTDEGERKAKELNVMFIETSAKAGYNVKQLFRR 166
Query: 697 ILTEIYRIVSQRQMRDP 747
I + I+ + P
Sbjct: 167 IAGALPGIIKDDPVEPP 183
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 66.1 bits (154), Expect = 3e-11
Identities = 25/61 (40%), Positives = 48/61 (78%)
Frame = +3
Query: 261 VGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYY 440
VGK+S+++RF + F+ ++TIG++F ++++ ++ +TI+ Q+WDTAGQER+R++ +Y
Sbjct: 22 VGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYI 81
Query: 441 R 443
R
Sbjct: 82 R 82
Score = 51.6 bits (118), Expect = 6e-07
Identities = 27/77 (35%), Positives = 43/77 (55%)
Frame = +1
Query: 517 ELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQN 696
++R+ +++I+LVGNK+DL R + TE+ + A + FIETSA NV+ F+
Sbjct: 108 DVRNERGCDVIIVLVGNKTDLADKRQVSTEDGEKKARDLNVMFIETSAKAGYNVKQLFRK 167
Query: 697 ILTEIYRIVSQRQMRDP 747
I T + IV + P
Sbjct: 168 IATALPGIVQEETPEQP 184
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein.
Length = 69
Score = 66.1 bits (154), Expect = 3e-11
Identities = 32/50 (64%), Positives = 37/50 (74%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAG 404
SGVGKS LL RF + + STIGV+F R+IE+DGKTIK QIWDTAG
Sbjct: 20 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAG 69
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 199 MGTREDEYDYLFKVVLIGD 255
M EYDYLFK++LIGD
Sbjct: 1 MAAMNPEYDYLFKLLLIGD 19
>U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like
protein.
Length = 69
Score = 65.3 bits (152), Expect = 5e-11
Identities = 31/49 (63%), Positives = 35/49 (71%)
Frame = +3
Query: 258 GVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAG 404
GVGKS LL +FT +F + TIGVEF TR IEV G+ IK QIWDTAG
Sbjct: 21 GVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAG 69
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 65.3 bits (152), Expect = 5e-11
Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVD-GKTIKAQIWDTAGQERYRAITS 431
S VGK+ L RF N F +TIGV+F +++++ + I Q+WDTAGQER+R+IT
Sbjct: 211 SAVGKTCFLHRFCHNRFKPLFNATIGVDFTVKTMKIPPNRAIAMQLWDTAGQERFRSITK 270
Query: 432 AYYRGA 449
Y+R A
Sbjct: 271 QYFRKA 276
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 64.9 bits (151), Expect = 6e-11
Identities = 29/63 (46%), Positives = 40/63 (63%)
Frame = +3
Query: 261 VGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYY 440
VGKSSL+ RF N+F+ + STI F +++ V+ IWDTAGQE+Y A+ YY
Sbjct: 23 VGKSSLVLRFVENKFSCKHLSTIQASFQNKTVNVEDCQADLHIWDTAGQEKYHALGPIYY 82
Query: 441 RGA 449
RG+
Sbjct: 83 RGS 85
Score = 51.6 bits (118), Expect = 6e-07
Identities = 23/67 (34%), Positives = 43/67 (64%)
Frame = +1
Query: 550 IMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEIYRIVSQ 729
I++VGNK DL R + ++A+A+AE+ G ++ETSA D+ + AF+++ ++ S+
Sbjct: 120 ILIVGNKIDLEEERQVTRQDAEAYAESEGALYMETSAQDNVGISDAFESLTAKMIE-HSR 178
Query: 730 RQMRDPP 750
+ +PP
Sbjct: 179 TRSTEPP 185
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 64.5 bits (150), Expect = 8e-11
Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEF-NLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITS 431
S GK+ LL R+ F N ST+G+++ + I + K +K QIWDTAGQER+R++T+
Sbjct: 11 SCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWDTAGQERFRSVTT 70
Query: 432 AYYRGA 449
+YYR A
Sbjct: 71 SYYRDA 76
Score = 51.6 bits (118), Expect = 6e-07
Identities = 25/70 (35%), Positives = 43/70 (61%)
Frame = +1
Query: 511 LRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAF 690
L +++++ + + + LVGNK DL R++PT+E K AEA + F+ETSA NV+ AF
Sbjct: 98 LSQIKEYGKEAVQVTLVGNKCDLP--RAVPTDEGKRLAEAYQIPFMETSAKTGFNVDRAF 155
Query: 691 QNILTEIYRI 720
+ + ++
Sbjct: 156 LGLAERMLKL 165
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 64.5 bits (150), Expect = 8e-11
Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEF-NLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITS 431
S GK+ LL R+ F N ST+G+++ + I + K +K QIWDTAGQER+R++T+
Sbjct: 11 SCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWDTAGQERFRSVTT 70
Query: 432 AYYRGA 449
+YYR A
Sbjct: 71 SYYRDA 76
Score = 51.6 bits (118), Expect = 6e-07
Identities = 25/70 (35%), Positives = 43/70 (61%)
Frame = +1
Query: 511 LRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAF 690
L +++++ + + + LVGNK DL R++PT+E K AEA + F+ETSA NV+ AF
Sbjct: 98 LSQIKEYGKEAVQVTLVGNKCDLP--RAVPTDEGKRLAEAYQIPFMETSAKTGFNVDRAF 155
Query: 691 QNILTEIYRI 720
+ + ++
Sbjct: 156 LGLAERMLKL 165
>U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein.
Length = 66
Score = 64.1 bits (149), Expect = 1e-10
Identities = 30/52 (57%), Positives = 35/52 (67%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQE 410
+GVGKS LL +FT F TIGVEF R + +DGK IK Q+WDTAGQE
Sbjct: 15 TGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQMWDTAGQE 66
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 62.5 bits (145), Expect = 3e-10
Identities = 29/64 (45%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYR-AITS 431
+ VGK+ L RF F +++TIGV+F RS ++ + ++ Q+WDTAGQERYR +I +
Sbjct: 109 AAVGKTCLSFRFCCGRFPEHTEATIGVDFRERSCVIENELLRVQLWDTAGQERYRQSIVA 168
Query: 432 AYYR 443
YYR
Sbjct: 169 HYYR 172
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/68 (27%), Positives = 37/68 (54%)
Frame = +1
Query: 535 DQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEIY 714
D + +L+GNK D+ + T+EA+ FA+ N ++ ETSA ++ + LT ++
Sbjct: 207 DSEVPRILIGNKCDVECTNRVSTDEAQMFADRNNMALFETSAKLASEADHVESIFLTLLH 266
Query: 715 RIVSQRQM 738
++ + M
Sbjct: 267 KLQQSKPM 274
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 62.1 bits (144), Expect = 4e-10
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 9/74 (12%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVD---------GKTIKAQIWDTAGQ 407
SGVGK+S L R+T N F + ST+G++F + + G+ + Q+WDTAGQ
Sbjct: 16 SGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYKSSRGGFGGRGQRVLLQLWDTAGQ 75
Query: 408 ERYRAITSAYYRGA 449
ER+R++T+A++R A
Sbjct: 76 ERFRSLTTAFFRDA 89
Score = 49.6 bits (113), Expect = 2e-06
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = +1
Query: 511 LRELRDHAD-QNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPA 687
L +L+ HA + I++ GNK+DL + R + T AK A+ GL + ETSA STNVE +
Sbjct: 111 LSQLKVHAYCEQPDIIICGNKADLENRRQVSTARAKQLADQLGLPYFETSACTSTNVEKS 170
Query: 688 FQNILTEIYRIVSQ 729
+L + + + Q
Sbjct: 171 VDCLLDLVMQRIQQ 184
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 62.1 bits (144), Expect = 4e-10
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 9/74 (12%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVD---------GKTIKAQIWDTAGQ 407
SGVGK+S L R+T N F + ST+G++F + + G+ + Q+WDTAGQ
Sbjct: 16 SGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYKSSRGGFGGRGQRVLLQLWDTAGQ 75
Query: 408 ERYRAITSAYYRGA 449
ER+R++T+A++R A
Sbjct: 76 ERFRSLTTAFFRDA 89
Score = 49.6 bits (113), Expect = 2e-06
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = +1
Query: 511 LRELRDHAD-QNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPA 687
L +L+ HA + I++ GNK+DL + R + T AK A+ GL + ETSA STNVE +
Sbjct: 111 LSQLKVHAYCEQPDIIICGNKADLENRRQVSTARAKQLADQLGLPYFETSACTSTNVEKS 170
Query: 688 FQNILTEIYRIVSQ 729
+L + + + Q
Sbjct: 171 VDCLLDLVMQRIQQ 184
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein.
Length = 66
Score = 58.4 bits (135), Expect = 5e-09
Identities = 26/48 (54%), Positives = 36/48 (75%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDT 398
SGVGKSSLL RF N F+ +TIGV+F R+++++G+ +K QIWDT
Sbjct: 19 SGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIWDT 66
>U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like
protein.
Length = 69
Score = 56.0 bits (129), Expect = 3e-08
Identities = 24/50 (48%), Positives = 34/50 (68%)
Frame = +3
Query: 258 GVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQ 407
GVGK+ ++ RF F +TIGV+F +++ VDGK +K QIWDTAG+
Sbjct: 20 GVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQIWDTAGE 69
Score = 30.3 bits (65), Expect = 1.6
Identities = 10/16 (62%), Positives = 15/16 (93%)
Frame = +1
Query: 211 EDEYDYLFKVVLIGDL 258
+D +DYLFK+VL+GD+
Sbjct: 4 DDGFDYLFKIVLVGDM 19
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK----TIKAQIWDTAGQERYRA 422
SGVGK+S++ R +TIG F + + D + ++ Q+WDTAGQER+R
Sbjct: 61 SGVGKTSIIYRHRYGAHYRPVNATIGASFVSFDVGADYRDREDVVRLQVWDTAGQERFRC 120
Query: 423 ITSAYYRGA 449
+ Y R A
Sbjct: 121 MVPMYMRNA 129
Score = 31.9 bits (69), Expect = 0.52
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +1
Query: 511 LREL-RDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPA 687
L++L R ++ + L+GNK+DL R + E KA A F E S D N+
Sbjct: 151 LKDLDRSSGTEDANVYLIGNKTDLVEKREVTEAEGKAMAAKINAKFFELSN-DQPNL--- 206
Query: 688 FQNILTEI 711
F IL+E+
Sbjct: 207 FAAILSEL 214
>U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein.
Length = 67
Score = 49.2 bits (112), Expect = 3e-06
Identities = 18/47 (38%), Positives = 37/47 (78%)
Frame = +3
Query: 261 VGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTA 401
VGK+SL++RF + F+ ++TIG++F ++++ ++ +T++ Q+WDTA
Sbjct: 21 VGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQMWDTA 67
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 48.0 bits (109), Expect = 7e-06
Identities = 23/63 (36%), Positives = 38/63 (60%)
Frame = +1
Query: 529 HADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTE 708
++D ++ I+LVGNK D+R R + E + AE G ++ETSA NV+ F +++ E
Sbjct: 119 NSDSSVPIVLVGNKGDMRDQRVVSAELCRQRAEQWGCHYVETSAKRRENVDKVFYDLMRE 178
Query: 709 IYR 717
+ R
Sbjct: 179 MKR 181
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/62 (41%), Positives = 35/62 (56%)
Frame = +3
Query: 258 GVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAY 437
GVGKS+L +F +EF E + T + + + +DG+ I DTAGQE Y AI Y
Sbjct: 27 GVGKSALTLQFMYDEFVEEYEPTKADSYR-KKVVLDGEECSIDILDTAGQEDYSAIRDNY 85
Query: 438 YR 443
YR
Sbjct: 86 YR 87
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +3
Query: 258 GVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAY 437
G GK++ + R EF + +T+GVE + I+ +WDTAGQE++ + Y
Sbjct: 19 GTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQIRFNVWDTAGQEKFGGLRDGY 78
Query: 438 Y 440
Y
Sbjct: 79 Y 79
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 45.6 bits (103), Expect = 4e-05
Identities = 25/62 (40%), Positives = 34/62 (54%)
Frame = +3
Query: 258 GVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAY 437
GVGKS+L + +N F E TI + + + +DG+T I DTAGQE Y A+ Y
Sbjct: 13 GVGKSALTIQLIQNHFVEEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQY 71
Query: 438 YR 443
R
Sbjct: 72 MR 73
Score = 35.9 bits (79), Expect = 0.032
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = +1
Query: 511 LRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAF 690
+R ++D D + ++LVGNK DL RS+ A+ G+ ++TSA V+ AF
Sbjct: 100 IRRVKDSDD--VPMVLVGNKCDLSS-RSVDFRTVSETAKGYGIPNVDTSAKTRMGVDEAF 156
Query: 691 QNILTEI 711
++ EI
Sbjct: 157 YTLVREI 163
>Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical
protein F54C8.5 protein.
Length = 207
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/64 (35%), Positives = 36/64 (56%)
Frame = +1
Query: 520 LRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNI 699
+R + D +I I++VGNK+DL R + EE + A F+E +A +S V F+ +
Sbjct: 111 VRTYGDTSIPIVIVGNKTDLSTQRVVRAEEGEELARQWDAKFVEITARESNRVHEVFELL 170
Query: 700 LTEI 711
L EI
Sbjct: 171 LREI 174
Score = 34.7 bits (76), Expect = 0.073
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = +3
Query: 261 VGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERY 416
VGKS+L+ RFT+N F +STI + ++ I + ++ DTAGQ+ Y
Sbjct: 24 VGKSALVLRFTQNIFPERYESTIEDQH-SKHIAAFHRDYHLRVTDTAGQQEY 74
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 45.6 bits (103), Expect = 4e-05
Identities = 25/62 (40%), Positives = 34/62 (54%)
Frame = +3
Query: 258 GVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAY 437
GVGKS+L + +N F E TI + + + +DG+T I DTAGQE Y A+ Y
Sbjct: 16 GVGKSALTIQLIQNHFVEEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQY 74
Query: 438 YR 443
R
Sbjct: 75 MR 76
Score = 35.9 bits (79), Expect = 0.032
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = +1
Query: 511 LRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAF 690
+R ++D D + ++LVGNK DL RS+ A+ G+ ++TSA V+ AF
Sbjct: 103 IRRVKDSDD--VPMVLVGNKCDLSS-RSVDFRTVSETAKGYGIPNVDTSAKTRMGVDEAF 159
Query: 691 QNILTEI 711
++ EI
Sbjct: 160 YTLVREI 166
>U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein.
Length = 65
Score = 44.0 bits (99), Expect = 1e-04
Identities = 16/44 (36%), Positives = 34/44 (77%)
Frame = +3
Query: 261 VGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIW 392
VGK+S+++RF + F+ ++TIG++F ++++ ++ +TI+ QIW
Sbjct: 22 VGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQIW 65
>Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical
protein F17C8.4 protein.
Length = 211
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = +3
Query: 258 GVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAY 437
GVGKSSL +F + +F TI ++ + E+DG + + DTAGQE + A+ Y
Sbjct: 27 GVGKSSLTIQFFQKQFVDYYDPTIEDQYI-QHCEIDGNWVIMDVLDTAGQEEFSAMREQY 85
Query: 438 YRG 446
RG
Sbjct: 86 IRG 88
Score = 35.1 bits (77), Expect = 0.055
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 550 IMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALD-STNVEPAFQNIL 702
++LV NK DL + R + +E + A L +IETSA + NV+ AF ++
Sbjct: 125 VLLVANKVDLINQRVVSEQEGRELAAQLKLMYIETSAKEPPVNVDAAFHELV 176
>U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding
protein protein.
Length = 211
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = +3
Query: 258 GVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAY 437
GVGKSSL +F + +F TI ++ + E+DG + + DTAGQE + A+ Y
Sbjct: 27 GVGKSSLTIQFFQKQFVDYYDPTIEDQYI-QHCEIDGNWVIMDVLDTAGQEEFSAMREQY 85
Query: 438 YRG 446
RG
Sbjct: 86 IRG 88
Score = 35.1 bits (77), Expect = 0.055
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 550 IMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALD-STNVEPAFQNIL 702
++LV NK DL + R + +E + A L +IETSA + NV+ AF ++
Sbjct: 125 VLLVANKVDLINQRVVSEQEGRELAAQLKLMYIETSAKEPPVNVDAAFHELV 176
>Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical
protein K03D3.10 protein.
Length = 195
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/52 (42%), Positives = 32/52 (61%)
Frame = +3
Query: 261 VGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERY 416
VGK+ LL +T N F E T+ ++T ++ VDG+ I +WDTAGQ+ Y
Sbjct: 14 VGKTCLLLSYTTNAFPGEYILTVFDTYST-NVMVDGRPINLSLWDTAGQDDY 64
>U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein.
Length = 195
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/52 (42%), Positives = 32/52 (61%)
Frame = +3
Query: 261 VGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERY 416
VGK+ LL +T N F E T+ ++T ++ VDG+ I +WDTAGQ+ Y
Sbjct: 14 VGKTCLLLSYTTNAFPGEYILTVFDTYST-NVMVDGRPINLSLWDTAGQDDY 64
>X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-related
protein protein.
Length = 191
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/60 (38%), Positives = 33/60 (55%)
Frame = +3
Query: 261 VGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYY 440
VGK+ LL +T N F E T+ ++ ++ VDG+ I +WDTAGQE Y + Y
Sbjct: 14 VGKTCLLISYTTNAFPGEYIPTVFDNYSA-NVMVDGRPINLGLWDTAGQEDYDRLRPLSY 72
>L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/60 (38%), Positives = 33/60 (55%)
Frame = +3
Query: 261 VGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYY 440
VGK+ LL +T N F E T+ ++ ++ VDG+ I +WDTAGQE Y + Y
Sbjct: 14 VGKTCLLISYTTNAFPGEYIPTVFDNYSA-NVMVDGRPINLGLWDTAGQEDYDRLRPLSY 72
>L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/60 (38%), Positives = 33/60 (55%)
Frame = +3
Query: 261 VGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYY 440
VGK+ LL +T N F E T+ ++ ++ VDG+ I +WDTAGQE Y + Y
Sbjct: 14 VGKTCLLISYTTNAFPGEYIPTVFDNYSA-NVMVDGRPINLGLWDTAGQEDYDRLRPLSY 72
>AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse
engulfment proteinCED-10 protein.
Length = 191
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/60 (38%), Positives = 33/60 (55%)
Frame = +3
Query: 261 VGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYY 440
VGK+ LL +T N F E T+ ++ ++ VDG+ I +WDTAGQE Y + Y
Sbjct: 14 VGKTCLLISYTTNAFPGEYIPTVFDNYSA-NVMVDGRPINLGLWDTAGQEDYDRLRPLSY 72
>AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death
abnormality protein10, isoform b protein.
Length = 191
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/60 (38%), Positives = 33/60 (55%)
Frame = +3
Query: 261 VGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYY 440
VGK+ LL +T N F E T+ ++ ++ VDG+ I +WDTAGQE Y + Y
Sbjct: 14 VGKTCLLISYTTNAFPGEYIPTVFDNYSA-NVMVDGRPINLGLWDTAGQEDYDRLRPLSY 72
>U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein.
Length = 74
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 9/58 (15%)
Frame = +3
Query: 258 GVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVD---------GKTIKAQIWDTAG 404
GVGK+S L R+T N F + ST+G++F + + + G+ + QIWDTAG
Sbjct: 17 GVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYESSRGGFGGRGQRVLLQIWDTAG 74
>U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey2
ras-like proteinhomolog protein 1 protein.
Length = 125
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/64 (34%), Positives = 34/64 (53%)
Frame = +1
Query: 511 LRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAF 690
++E++ +A IMLVGNK D R + + + A FIETSA ++ N+ F
Sbjct: 34 MKEVKGNAIAETPIMLVGNKKDEESKREVSSNSGQKVATNMECGFIETSAKNNENITELF 93
Query: 691 QNIL 702
Q +L
Sbjct: 94 QQLL 97
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/59 (37%), Positives = 33/59 (55%)
Frame = +3
Query: 264 GKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYY 440
GK+ LL F++++F T+ + IEVDGK ++ +WDTAGQE Y + Y
Sbjct: 17 GKTCLLIVFSKDQFPDVYVPTVFENYVA-DIEVDGKQVELALWDTAGQEDYDRLRPLSY 74
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/59 (37%), Positives = 33/59 (55%)
Frame = +3
Query: 264 GKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYY 440
GK+ LL F++++F T+ + IEVDGK ++ +WDTAGQE Y + Y
Sbjct: 17 GKTCLLIVFSKDQFPDVYVPTVFENYVA-DIEVDGKQVELALWDTAGQEDYDRLRPLSY 74
>AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death
abnormality protein10, isoform a protein.
Length = 129
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = +3
Query: 261 VGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERY 416
VGK+ LL +T N F E T+ ++ ++ VDG+ I +WDTAGQE Y
Sbjct: 14 VGKTCLLISYTTNAFPGEYIPTVFDNYSA-NVMVDGRPINLGLWDTAGQEDY 64
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = +1
Query: 538 QNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQ 693
+ + ++LVGNKSDL R + EA FAE + + ETSA + NV F+
Sbjct: 106 KEVPMILVGNKSDLAETRQVDESEAHNFAEKLKIPYFETSARLNQNVSEVFE 157
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/64 (34%), Positives = 35/64 (54%)
Frame = +3
Query: 258 GVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAY 437
GVGKS+L ++ + F +TI + S +VD + + +I DTAG E++ + Y
Sbjct: 13 GVGKSALTLQYVQGIFVHTYDATIEDSYRKLS-KVDAENARLEILDTAGTEQFTGMRETY 71
Query: 438 YRGA 449
YR A
Sbjct: 72 YRTA 75
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/70 (32%), Positives = 37/70 (52%)
Frame = +1
Query: 550 IMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEIYRIVSQ 729
I+LVGNK+DL + R + EA+ A + ++E SA NV+ AF +I+ + +
Sbjct: 125 IILVGNKADLENERHVARHEAEELAHRLSIPYLECSAKIRKNVDEAFFDIVRLVRKYQHD 184
Query: 730 RQMRDPPEGD 759
+M P D
Sbjct: 185 ERMPIHPHDD 194
Score = 38.7 bits (86), Expect = 0.005
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = +3
Query: 258 GVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAY 437
GVGKS+L +F + F + TI + T+ VD K +I DTAGQE + + Y
Sbjct: 27 GVGKSALTIQFIQRYFVQDYDPTIEDSY-TKQCFVDEDLCKLEILDTAGQEEFSTMREQY 85
Query: 438 YR 443
R
Sbjct: 86 LR 87
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/70 (32%), Positives = 37/70 (52%)
Frame = +1
Query: 550 IMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEIYRIVSQ 729
I+LVGNK+DL + R + EA+ A + ++E SA NV+ AF +I+ + +
Sbjct: 125 IILVGNKADLENERHVARHEAEELAHRLSIPYLECSAKIRKNVDEAFFDIVRLVRKYQHD 184
Query: 730 RQMRDPPEGD 759
+M P D
Sbjct: 185 ERMPIHPHDD 194
Score = 38.7 bits (86), Expect = 0.005
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = +3
Query: 258 GVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAY 437
GVGKS+L +F + F + TI + T+ VD K +I DTAGQE + + Y
Sbjct: 27 GVGKSALTIQFIQRYFVQDYDPTIEDSY-TKQCFVDEDLCKLEILDTAGQEEFSTMREQY 85
Query: 438 YR 443
R
Sbjct: 86 LR 87
>U50301-3|AAM29676.1| 370|Caenorhabditis elegans Hypothetical
protein F20D6.8 protein.
Length = 370
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = +1
Query: 550 IMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEIYRIVSQ 729
+ L+GNK DL+ + I T E K+ A F+E SAL N E + IL E+ +
Sbjct: 282 LFLIGNKCDLKRNQVISTNEGKSVARTFKCDFLEVSALLGMNTEETWTTILKELQEPSER 341
Query: 730 RQ 735
R+
Sbjct: 342 RR 343
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/70 (32%), Positives = 37/70 (52%)
Frame = +1
Query: 550 IMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEIYRIVSQ 729
I+LVGNK+DL + R + EA+ A + ++E SA NV+ AF +I+ + +
Sbjct: 125 IILVGNKADLENERHVARHEAEELAHRLSIPYLECSAKIRKNVDEAFFDIVRLVRKYQHD 184
Query: 730 RQMRDPPEGD 759
+M P D
Sbjct: 185 ERMPIHPHDD 194
Score = 38.7 bits (86), Expect = 0.005
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = +3
Query: 258 GVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAY 437
GVGKS+L +F + F + TI + T+ VD K +I DTAGQE + + Y
Sbjct: 27 GVGKSALTIQFIQRYFVQDYDPTIEDSY-TKQCFVDEDLCKLEILDTAGQEEFSTMREQY 85
Query: 438 YR 443
R
Sbjct: 86 LR 87
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 41.5 bits (93), Expect = 6e-04
Identities = 23/62 (37%), Positives = 36/62 (58%)
Frame = +3
Query: 258 GVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAY 437
GVGKS+L +F + F + TI +F + IEVDG+ +I DTAG E++ ++ Y
Sbjct: 13 GVGKSALTVQFVSSTFIEKYDPTIE-DFYRKEIEVDGQPSVLEILDTAGTEQFSSMRDLY 71
Query: 438 YR 443
+
Sbjct: 72 IK 73
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 41.1 bits (92), Expect = 8e-04
Identities = 22/66 (33%), Positives = 35/66 (53%)
Frame = +1
Query: 520 LRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNI 699
LR + ++LVGNK DL R + ++ + A G +F+ETSA NV F ++
Sbjct: 101 LRVKDTDEVPMILVGNKCDLEDERVVGKDQGQNLARQFGSAFLETSAKAKINVSEVFYDL 160
Query: 700 LTEIYR 717
+ +I R
Sbjct: 161 VRQINR 166
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/62 (35%), Positives = 35/62 (56%)
Frame = +3
Query: 258 GVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAY 437
GVGKS+L +F + F + TI + + +EVDG+ +I DTAG E++ A+ Y
Sbjct: 13 GVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDGQQCMLEILDTAGTEQFTAMRDLY 71
Query: 438 YR 443
+
Sbjct: 72 MK 73
>Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical
protein C35C5.4 protein.
Length = 195
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = +3
Query: 261 VGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYY 440
VGK+ +L +T + F ++ T+ ++ + + +DG + +WDTAGQE Y + Y
Sbjct: 18 VGKTCMLISYTTDSFPVQYVPTVFDNYSAQ-MSLDGNVVNLGLWDTAGQEDYDRLRPLSY 76
Query: 441 --RGAWARCSCTISP 479
+ C +SP
Sbjct: 77 PQTDVFILCFSVVSP 91
>U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase
protein.
Length = 195
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = +3
Query: 261 VGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYY 440
VGK+ +L +T + F ++ T+ ++ + + +DG + +WDTAGQE Y + Y
Sbjct: 18 VGKTCMLISYTTDSFPVQYVPTVFDNYSAQ-MSLDGNVVNLGLWDTAGQEDYDRLRPLSY 76
Query: 441 --RGAWARCSCTISP 479
+ C +SP
Sbjct: 77 PQTDVFILCFSVVSP 91
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 264 GKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK-TIKAQIWDTAGQERYRAITSAYY 440
GK+S+ RF + F+ T+G++F +R I + + + Q+WD GQ + Y
Sbjct: 47 GKTSICQRFAKESFDKSYHQTLGLDFFSRRITLPHEMQVLVQVWDIGGQSIAGEMIDKYL 106
Query: 441 RGA 449
GA
Sbjct: 107 TGA 109
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +1
Query: 544 ILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEIYRI 720
+ ++L+GNK+DL R + E K FA +N + SA V F+ + E+ +
Sbjct: 145 VKLVLMGNKTDLEERRVVSVEAHKNFATSNDMMPTYVSAKTGDTVFLTFRQAVAEVLNV 203
>U41276-1|AAA82469.1| 238|Caenorhabditis elegans Hypothetical
protein C52B11.5 protein.
Length = 238
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +1
Query: 541 NILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEIY 714
N I +VG K+D++ ++ + +E +FAE G S ETS+ NVE +IL I+
Sbjct: 130 NANITVVGTKADVKEMQ-VQWQEVDSFAENQGFSCFETSSKTGVNVEIILHDILETIF 186
>CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical
protein C44C11.1b protein.
Length = 168
Score = 38.7 bits (86), Expect = 0.005
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = +3
Query: 258 GVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAY 437
GVGKS+L +F + F + TI + T+ VD K +I DTAGQE + + Y
Sbjct: 27 GVGKSALTIQFIQRYFVQDYDPTIEDSY-TKQCFVDEDLCKLEILDTAGQEEFSTMREQY 85
Query: 438 YR 443
R
Sbjct: 86 LR 87
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 38.7 bits (86), Expect = 0.005
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Frame = +3
Query: 264 GKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYYR 443
GK+SLL +T+ +F L++ +T + S+ +D K ++DTAGQ Y I Y
Sbjct: 16 GKTSLLVAYTKKQF-LDNYTTTVFDNWAVSVHIDNKNYAVNLFDTAGQGNYEQIRCLSYP 74
Query: 444 GA--WARCSCTISPST---CRTRTW 503
A + C I T CR+ TW
Sbjct: 75 HANVFLVCFSMIDRKTLESCRS-TW 98
Score = 31.9 bits (69), Expect = 0.52
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Frame = +1
Query: 499 RGAGLRELRDHADQNILIMLVGNKSDL---RHLRSIPTEE-AKAFAEANGL-SFIETSAL 663
R + E+R +A N+ IMLVG K+DL R+ TE+ AK A G F SAL
Sbjct: 95 RSTWIPEIRKYAGDNVPIMLVGTKNDLVDDADSRNTVTEDYAKRVAHEIGCHKFYSCSAL 154
Query: 664 DSTNVEPAF 690
++ F
Sbjct: 155 THKGLKRVF 163
>AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical
protein T26C12.3 protein.
Length = 393
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/68 (29%), Positives = 37/68 (54%)
Frame = +1
Query: 514 RELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQ 693
+ L + N I+LVG+K D+R R + + E + A G+ F+E S+ + V AF+
Sbjct: 312 KRLEHSREHNQPIVLVGSKKDMRVKRVVTSFEGQQLARTLGIPFLEVSSKQNDCVFEAFE 371
Query: 694 NILTEIYR 717
+++ I +
Sbjct: 372 ELVSLIQK 379
>U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein.
Length = 115
Score = 36.3 bits (80), Expect = 0.024
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK----TIKAQIWDTAGQ 407
SGVGK+S++ R +TIG F + + D + ++ Q+WDTAGQ
Sbjct: 61 SGVGKTSIIYRHRYGAHYRPVNATIGASFVSFDVGADYRDREDVVRLQMWDTAGQ 115
>U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical
protein R07G3.1 protein.
Length = 191
Score = 36.3 bits (80), Expect = 0.024
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +3
Query: 261 VGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYY 440
VGK+ LL +T N+F E T+ +A ++ + G+ ++DTAGQE Y + Y
Sbjct: 14 VGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQEDYDRLRPLSY 72
Query: 441 --RGAWARCSCTISPST 485
+ C ++P++
Sbjct: 73 PQTDVFLVCFSVVAPAS 89
>L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 188
Score = 36.3 bits (80), Expect = 0.024
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +3
Query: 261 VGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYY 440
VGK+ LL +T N+F E T+ +A ++ + G+ ++DTAGQE Y + Y
Sbjct: 11 VGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQEDYDRLRPLSY 69
Query: 441 --RGAWARCSCTISPST 485
+ C ++P++
Sbjct: 70 PQTDVFLVCFSVVAPAS 86
>S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog
protein.
Length = 191
Score = 35.9 bits (79), Expect = 0.032
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +3
Query: 261 VGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYY 440
VGK+ LL +T N+F E T+ +A ++ + G+ ++DTAGQE Y + Y
Sbjct: 14 VGKTCLLISYTTNKFPSEYVPTVFDNYAVTAM-IGGEPYTLGLFDTAGQEDYDRLRPLSY 72
Query: 441 --RGAWARCSCTISPST 485
+ C ++P++
Sbjct: 73 PQTDVFLVCFSVVAPAS 89
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 35.1 bits (77), Expect = 0.055
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +3
Query: 264 GKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYYR 443
GK++ ++ +F + T+G F R I TIK +WD GQ R+R++ Y R
Sbjct: 32 GKTTFVNVIASGQFTEDMIPTVG--FNMRKITKGNVTIK--LWDIGGQPRFRSMWERYCR 87
Query: 444 G 446
G
Sbjct: 88 G 88
>U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein.
Length = 70
Score = 35.1 bits (77), Expect = 0.055
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 9/53 (16%)
Frame = +3
Query: 255 SGVGKSS---------LLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQ 386
SGVGK+S L++++ F + K+TIG +F TR + +D +T+ Q
Sbjct: 18 SGVGKTSLMNQYEIGDLMNQYVNRRFMNQYKATIGADFLTRDVNIDDRTVTLQ 70
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 35.1 bits (77), Expect = 0.055
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +3
Query: 264 GKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYYR 443
GK++ ++ +F + T+G F R I TIK +WD GQ R+R++ Y R
Sbjct: 32 GKTTFVNVIASGQFTEDMIPTVG--FNMRKITKGNVTIK--LWDIGGQPRFRSMWERYCR 87
Query: 444 G 446
G
Sbjct: 88 G 88
>AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical
protein W04C9.5 protein.
Length = 369
Score = 34.3 bits (75), Expect = 0.097
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +1
Query: 550 IMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEI 711
I+L+GNK DL+ + E A+ + +F+E SA S N+ + IL ++
Sbjct: 280 IILIGNKIDLKRNTVVSKMEGACLAKVHKCNFVEVSAQYSMNISELWTIILKQL 333
>U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like
protein.
Length = 53
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/36 (38%), Positives = 25/36 (69%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEV 362
+GVGK+ L+ +FT+ F +TIGV+F ++++V
Sbjct: 16 AGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKV 51
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +3
Query: 264 GKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYY 440
GK+++L + + +E+K TIG EV + + IWD GQE R S YY
Sbjct: 29 GKTTILYNYVTKD-QVETKPTIGSNVE----EVSYRNLDFVIWDIGGQESLRKSWSTYY 82
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 33.1 bits (72), Expect = 0.22
Identities = 19/64 (29%), Positives = 32/64 (50%)
Frame = +3
Query: 264 GKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYYR 443
GK+++L + + ++ + T+G T V K IK +WD GQ++ R + YY
Sbjct: 25 GKTTILYKLKLGQ-SVTTIPTVGFNVET----VTYKNIKFNVWDVGGQDKIRPLWRHYYT 79
Query: 444 GAWA 455
G A
Sbjct: 80 GTQA 83
>U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.1 protein.
Length = 179
Score = 32.7 bits (71), Expect = 0.30
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +3
Query: 258 GVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAY 437
G GK+++L + NE + + TIG T V + I +WD GQ++ RA+ Y
Sbjct: 27 GAGKTTILYKLKLNE-TVNTIPTIGFNVET----VTFQKITLTVWDVGGQKKIRALWKYY 81
Query: 438 Y 440
+
Sbjct: 82 F 82
>U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein.
Length = 66
Score = 32.7 bits (71), Expect = 0.30
Identities = 14/19 (73%), Positives = 16/19 (84%), Gaps = 1/19 (5%)
Frame = +3
Query: 390 WDTAGQERYR-AITSAYYR 443
WDTAGQERYR +I + YYR
Sbjct: 1 WDTAGQERYRQSIVAHYYR 19
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 32.3 bits (70), Expect = 0.39
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +3
Query: 258 GVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAY 437
G GK+++L R E + + TIG +V+ K +K Q+WD GQ R Y
Sbjct: 26 GAGKTTILYRLQVGEV-VTTIPTIGFNVE----QVEYKNLKFQVWDLGGQTSIRPYWRCY 80
Query: 438 Y 440
Y
Sbjct: 81 Y 81
>AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical
protein Y71F9AR.2 protein.
Length = 244
Score = 31.9 bits (69), Expect = 0.52
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +1
Query: 553 MLVGNKSDLRHLRSIPTEEAKAFAEANGLSFIETS-ALD----STNVEPAFQNILTEIYR 717
+LVGNK+DL R + E + A + F E S A+D + + FQNI++ R
Sbjct: 119 LLVGNKTDLERYRQVSETEGERLASQHKAQFAECSAAIDLRQFTQGLHSIFQNIISGA-R 177
Query: 718 IVSQRQMRDPPE 753
S RQ E
Sbjct: 178 SPSPRQCSSDSE 189
>U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific
family, class rprotein 2 protein.
Length = 332
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +3
Query: 261 VGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDT 398
VGK++++ R+ NEF+ + K TI + +R + G + I DT
Sbjct: 28 VGKTNIIRRYLYNEFSSKYKETI-EDLHSREFRIQGVPLPLDILDT 72
>U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein.
Length = 35
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 255 SGVGKSSLLSRFTRNEFNLESKSTIGVEF 341
SGVGKSSL+ RF + + E +IGV F
Sbjct: 6 SGVGKSSLMLRFVDDVVDPERAVSIGVPF 34
>AL031633-14|CAA21032.1| 903|Caenorhabditis elegans Hypothetical
protein Y39A1A.15c protein.
Length = 903
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +1
Query: 550 IMLVGNKSDL--RHLRSIPTEEAKAFA-EANGLSFIETSALDSTNVEPAFQNILTEIYRI 720
++LVG K + + R I +E + A + S+ ETS+ TNVE F+ +I ++
Sbjct: 133 LILVGTKDHISEKRARVITEDEGRQLAAQMKRCSYFETSSTYGTNVERVFKEACCKIIQL 192
Query: 721 VSQRQM 738
+ Q+
Sbjct: 193 RVRSQV 198
>AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical
protein Y39A1A.15b protein.
Length = 951
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +1
Query: 550 IMLVGNKSDL--RHLRSIPTEEAKAFA-EANGLSFIETSALDSTNVEPAFQNILTEIYRI 720
++LVG K + + R I +E + A + S+ ETS+ TNVE F+ +I ++
Sbjct: 181 LILVGTKDHISEKRARVITEDEGRQLAAQMKRCSYFETSSTYGTNVERVFKEACCKIIQL 240
Query: 721 VSQRQM 738
+ Q+
Sbjct: 241 RVRSQV 246
>AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical
protein Y39A1A.15a protein.
Length = 1107
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +1
Query: 550 IMLVGNKSDL--RHLRSIPTEEAKAFA-EANGLSFIETSALDSTNVEPAFQNILTEIYRI 720
++LVG K + + R I +E + A + S+ ETS+ TNVE F+ +I ++
Sbjct: 337 LILVGTKDHISEKRARVITEDEGRQLAAQMKRCSYFETSSTYGTNVERVFKEACCKIIQL 396
Query: 721 VSQRQM 738
+ Q+
Sbjct: 397 RVRSQV 402
>AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gamma
1B protein.
Length = 1107
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +1
Query: 550 IMLVGNKSDL--RHLRSIPTEEAKAFA-EANGLSFIETSALDSTNVEPAFQNILTEIYRI 720
++LVG K + + R I +E + A + S+ ETS+ TNVE F+ +I ++
Sbjct: 337 LILVGTKDHISEKRARVITEDEGRQLAAQMKRCSYFETSSTYGTNVERVFKEACCKIIQL 396
Query: 721 VSQRQM 738
+ Q+
Sbjct: 397 RVRSQV 402
>AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gamma
1A protein.
Length = 952
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +1
Query: 550 IMLVGNKSDL--RHLRSIPTEEAKAFA-EANGLSFIETSALDSTNVEPAFQNILTEIYRI 720
++LVG K + + R I +E + A + S+ ETS+ TNVE F+ +I ++
Sbjct: 181 LILVGTKDHISEKRARVITEDEGRQLAAQMKRCSYFETSSTYGTNVERVFKEACCKIIQL 240
Query: 721 VSQRQM 738
+ Q+
Sbjct: 241 RVRSQV 246
>U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.2 protein.
Length = 181
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +3
Query: 264 GKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYYR 443
GK+++L + E + + TIG T V+ K I +WD GQ++ R + Y++
Sbjct: 29 GKTTILYKLKLGEI-VTTIPTIGFNVET----VEYKNISFTVWDVGGQDKIRPLWRHYFQ 83
>AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation
factor related(20.5 kD) (arf-3) protein.
Length = 180
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +3
Query: 264 GKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYYR 443
GK+++L + E + + TIG T V+ K I +WD GQ++ R + Y++
Sbjct: 29 GKTTILYKLKLGEI-VTTIPTIGFNVET----VEYKNISFTVWDVGGQDKIRPLWRHYFQ 83
>AF192746-1|AAF08804.1| 401|Caenorhabditis elegans synapsin
protein.
Length = 401
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +3
Query: 96 ICDICVQYYFYLRSS*RLETDRFLTSTKELRINQNGHKRG*I*LFVQS--CTHWRSGVGK 269
+CD+ + +E F+ + +L I + GH+ F++ C HW+S VG
Sbjct: 170 LCDVEGMLQIMSKGDTEVEVQPFVDAKYDLHIQKIGHEYK---TFIRRGICKHWKSNVGS 226
Query: 270 SSL 278
S L
Sbjct: 227 SVL 229
>AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 3 protein.
Length = 180
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +3
Query: 264 GKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYYR 443
GK+++L + E + + TIG T V+ K I +WD GQ++ R + Y++
Sbjct: 29 GKTTILYKLKLGEI-VTTIPTIGFNVET----VEYKNISFTVWDVGGQDKIRPLWRHYFQ 83
>AC006743-3|AAF60504.2| 401|Caenorhabditis elegans Synapsin protein
1, isoform a protein.
Length = 401
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +3
Query: 96 ICDICVQYYFYLRSS*RLETDRFLTSTKELRINQNGHKRG*I*LFVQS--CTHWRSGVGK 269
+CD+ + +E F+ + +L I + GH+ F++ C HW+S VG
Sbjct: 170 LCDVEGMLQIMSKGDTEVEVQPFVDAKYDLHIQKIGHEYK---TFIRRGICKHWKSNVGS 226
Query: 270 SSL 278
S L
Sbjct: 227 SVL 229
>AC006743-2|AAM97971.1| 474|Caenorhabditis elegans Synapsin protein
1, isoform b protein.
Length = 474
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +3
Query: 96 ICDICVQYYFYLRSS*RLETDRFLTSTKELRINQNGHKRG*I*LFVQS--CTHWRSGVGK 269
+CD+ + +E F+ + +L I + GH+ F++ C HW+S VG
Sbjct: 243 LCDVEGMLQIMSKGDTEVEVQPFVDAKYDLHIQKIGHEYK---TFIRRGICKHWKSNVGS 299
Query: 270 SSL 278
S L
Sbjct: 300 SVL 302
>Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical
protein ZK1320.6 protein.
Length = 539
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +3
Query: 258 GVGKSSLLSRFTRNEFN--LESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITS 431
G GK+S++ R + + + + TIG T + K + WD G + R +
Sbjct: 379 GAGKTSIVRRLKKVQMDTVMAPHPTIGFNIET----IHYKNYRLNFWDVGGLPKLRHLWK 434
Query: 432 AYYRGAWA 455
YY A A
Sbjct: 435 HYYSNAQA 442
>AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical
protein Y54E10BR.2 protein.
Length = 191
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3
Query: 315 SKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYYRGA 449
SK T V T ++E++ + WD GQE R + + YY A
Sbjct: 51 SKITATVGLNTGNVELNNTCL--HFWDLGGQESLRELWATYYDDA 93
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,644,416
Number of Sequences: 27780
Number of extensions: 304008
Number of successful extensions: 1050
Number of sequences better than 10.0: 111
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1028
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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