Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0879
         (767 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    23   2.4  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    23   2.4  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              22   5.5  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    22   5.5  

>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = -3

Query: 585 MSEIALVADQH--DEDVLVGVVAQLAQPRSTFSYDRCLAIS 469
           +   +LV D+   DED+++G++    Q R+     +CL  S
Sbjct: 78  LEAFSLVDDEANVDEDIMLGLLPDQLQERAQSVMGKCLPTS 118


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = -3

Query: 585 MSEIALVADQH--DEDVLVGVVAQLAQPRSTFSYDRCLAIS 469
           +   +LV D+   DED+++G++    Q R+     +CL  S
Sbjct: 78  LEAFSLVDDEANVDEDIMLGLLPDQLQERAQSVMGKCLPTS 118


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +1

Query: 103 IFVSNIIFIYGHLDVSKLTD 162
           IF+  IIFIY +  ++++TD
Sbjct: 13  IFLILIIFIYSNETIAQVTD 32


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +1

Query: 103 IFVSNIIFIYGHLDVSKLTD 162
           IF+  IIFIY +  ++++TD
Sbjct: 13  IFLILIIFIYSNETIAQVTD 32


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,337
Number of Sequences: 438
Number of extensions: 3764
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)