Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0878
         (737 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC012044-1|AAH12044.1|  304|Homo sapiens small glutamine-rich te...    31   3.3  
AK096321-1|BAC04761.1|  304|Homo sapiens protein ( Homo sapiens ...    31   3.3  
AF368281-1|AAP29459.1|  304|Homo sapiens small glutamine rich pr...    31   3.3  
AF075050-1|AAC28459.1|  120|Homo sapiens H_YN88E09.1 protein.          31   3.3  

>BC012044-1|AAH12044.1|  304|Homo sapiens small glutamine-rich
           tetratricopeptide repeat (TPR)-containing, beta protein.
          Length = 304

 Score = 31.5 bits (68), Expect = 3.3
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +1

Query: 130 SRLMTTTGGAQGVGEVPPGGINALLEVGQSLAQQMQAANPDL 255
           S +MT   G    G      +++L++ GQ  AQQ+Q  NP+L
Sbjct: 242 SGMMTNAIGGPAAGVGGLTDLSSLIQAGQQFAQQIQQQNPEL 283


>AK096321-1|BAC04761.1|  304|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39002 fis, clone NT2RI2024008, moderately
           similar to SMALL GLUTAMINE-RICH TETRATRICOPEPTIDE
           REPEAT-CONTAINING PROTEIN. ).
          Length = 304

 Score = 31.5 bits (68), Expect = 3.3
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +1

Query: 130 SRLMTTTGGAQGVGEVPPGGINALLEVGQSLAQQMQAANPDL 255
           S +MT   G    G      +++L++ GQ  AQQ+Q  NP+L
Sbjct: 242 SGMMTNAIGGPAAGVGGLTDLSSLIQAGQQFAQQIQQQNPEL 283


>AF368281-1|AAP29459.1|  304|Homo sapiens small glutamine rich
           protein with tetratricopeptide repeats 2 protein.
          Length = 304

 Score = 31.5 bits (68), Expect = 3.3
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +1

Query: 130 SRLMTTTGGAQGVGEVPPGGINALLEVGQSLAQQMQAANPDL 255
           S +MT   G    G      +++L++ GQ  AQQ+Q  NP+L
Sbjct: 242 SGMMTNAIGGPAAGVGGLTDLSSLIQAGQQFAQQIQQQNPEL 283


>AF075050-1|AAC28459.1|  120|Homo sapiens H_YN88E09.1 protein.
          Length = 120

 Score = 31.5 bits (68), Expect = 3.3
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +1

Query: 130 SRLMTTTGGAQGVGEVPPGGINALLEVGQSLAQQMQAANPDL 255
           S +MT   G    G      +++L++ GQ  AQQ+Q  NP+L
Sbjct: 58  SGMMTNAIGGPAAGVGGLTDLSSLIQAGQQFAQQIQQQNPEL 99


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,538,835
Number of Sequences: 237096
Number of extensions: 2035750
Number of successful extensions: 4313
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4313
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)