Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0877
(469 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_04_0007 - 12074472-12074538,12074908-12075116,12077202-120774... 54 8e-08
03_05_0600 + 26021863-26022469,26022562-26022992 30 0.81
11_05_0026 - 18462749-18462841,18463642-18463726,18463989-184640... 30 1.1
10_08_0842 - 20954712-20957738 30 1.1
06_01_0707 + 5136210-5136584 30 1.1
09_02_0556 + 10637362-10637575,10637728-10637825 29 2.5
08_02_1286 - 25882773-25883771 29 2.5
06_01_0635 + 4623223-4623380,4623529-4623724,4624379-4624894,462... 28 3.3
03_03_0025 + 13848450-13849420,13850921-13851131,13851327-138514... 28 3.3
03_02_0631 + 9969841-9969868,9969965-9970082,9970186-9970828,997... 28 3.3
05_04_0123 + 18210069-18213737 28 4.3
12_02_0615 + 21242819-21243201,21244510-21244630,21244728-212448... 27 5.7
09_04_0258 - 16175258-16176069,16176111-16176414 27 5.7
06_01_0218 + 1647624-1647757,1648044-1648112,1648493-1648549,164... 27 5.7
02_01_0327 - 2241228-2242509,2243227-2243247,2243299-2243614,224... 27 5.7
12_02_1081 + 25914180-25914371,25918121-25919104 27 7.5
03_02_0390 + 8056006-8057502 27 7.5
03_01_0141 + 1116833-1117082,1117658-1118574,1119417-1119579,111... 27 7.5
02_05_0904 + 32644119-32644303,32644380-32644608 27 7.5
02_05_0474 - 29326168-29326396,29326473-29326657 27 7.5
08_01_0170 - 1440908-1441072,1441539-1441581,1442155-1442619,144... 27 10.0
04_03_0397 - 15362353-15363383,15385301-15385910,15386890-153870... 27 10.0
>11_04_0007 -
12074472-12074538,12074908-12075116,12077202-12077463,
12077547-12078043,12078651-12078719,12079258-12079363,
12080272-12080295,12081184-12081242,12081383-12081520
Length = 476
Score = 53.6 bits (123), Expect = 8e-08
Identities = 29/64 (45%), Positives = 38/64 (59%)
Frame = +2
Query: 74 EKPVLSGQRIKTRKRDEKEKYDPNGFRDALVQGLERAGGDLDAAYKYLDSAGSKLDYRRY 253
EKP L GQRIKTRKR+ DP F DA+VQ GDL+ K ++S S L++ RY
Sbjct: 69 EKPTLGGQRIKTRKRNIAAPLDPASFSDAIVQIYLDNAGDLELVAKSIES--SDLNFSRY 126
Query: 254 AKSY 265
++
Sbjct: 127 GDTF 130
>03_05_0600 + 26021863-26022469,26022562-26022992
Length = 345
Score = 30.3 bits (65), Expect = 0.81
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -3
Query: 323 PSIDTEPPGSSRPPA 279
PS+D EPPG S PPA
Sbjct: 220 PSLDNEPPGGSTPPA 234
>11_05_0026 -
18462749-18462841,18463642-18463726,18463989-18464021,
18464278-18464411
Length = 114
Score = 29.9 bits (64), Expect = 1.1
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -3
Query: 305 PPGSSRPPAMSTSNMTSHSVGSRVLIRPSLGTCRLRRDRH 186
PP R P S+++ TS V R+L RPS R D H
Sbjct: 13 PPQRRRNPLPSSASTTSEEVFGRLLQRPSFRRSRAEFDIH 52
>10_08_0842 - 20954712-20957738
Length = 1008
Score = 29.9 bits (64), Expect = 1.1
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = -3
Query: 335 LGDSPSIDTEPPGSSRPPAMSTSNMTSHSVGSRVLIRPS-LGTCRLRRDRHRPAPDPVPE 159
L S S D E +S PPA S S S G + RP+ LG +P+ PV +
Sbjct: 226 LNGSSSSDDESKATSAPPARSISGAAGRSNGPSLPSRPAGLGA---STSLSQPSARPVQQ 282
Query: 158 RRGN 147
R N
Sbjct: 283 TRAN 286
>06_01_0707 + 5136210-5136584
Length = 124
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -3
Query: 287 PPAMSTSNMTSHSV-GSRVLIRPSLGTCRLRRDRHRPAP 174
P S ++T V G RVL+ PS GT LRR RP P
Sbjct: 55 PGGKSGDHVTGGRVSGGRVLLSPS-GTSSLRRSHRRPPP 92
>09_02_0556 + 10637362-10637575,10637728-10637825
Length = 103
Score = 28.7 bits (61), Expect = 2.5
Identities = 27/88 (30%), Positives = 34/88 (38%), Gaps = 1/88 (1%)
Frame = -3
Query: 350 MQVLVLGDSPSIDTEPPGSSRPPAMSTSNMTSHSVGSRVLIRPS-LGTCRLRRDRHRPAP 174
M L L SPS+ + P S P S+ S G P+ L L R +
Sbjct: 1 MSSLSLSFSPSLQSSRPPSPLPSTADRSSTPSAVSGRHRRRAPATLAVPPLPRSPSLSSV 60
Query: 173 DPVPERRGNRSGHTSLSHLFFWS*SVDP 90
PV RRG R G + S + VDP
Sbjct: 61 -PVEARRGGRRGDCTASFISIHGADVDP 87
>08_02_1286 - 25882773-25883771
Length = 332
Score = 28.7 bits (61), Expect = 2.5
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = -3
Query: 359 PEKMQVLVLGDSPSIDTEPPGSSRPPAMSTSNMTSHSVGSRVLIRPSLGT 210
P + V+VL +PS + SS PPA++ S S+ SR L PS+ T
Sbjct: 75 PLVLAVVVLWSNPSTP-DSLLSSFPPAVTLHRTASASLNSRFLPHPSIRT 123
>06_01_0635 +
4623223-4623380,4623529-4623724,4624379-4624894,
4626212-4626276,4626387-4626453
Length = 333
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = -3
Query: 368 SSLPEKMQVLVLGDSPSIDTEPPGSSRPPAMSTSNMTSHSVGSRVLIRPSLGTCRLRRD 192
S + + V++L D+P++ T+ S++ S+S S S G + +CR+ D
Sbjct: 215 SGIDDSEDVVILEDTPNLPTQLGKSTKDGFSSSSENPSTSSGFPTAAQNGSSSCRITTD 273
>03_03_0025 +
13848450-13849420,13850921-13851131,13851327-13851459,
13851576-13851832
Length = 523
Score = 28.3 bits (60), Expect = 3.3
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = -3
Query: 257 SHSVGSRVLIRPSLGTCRLRRDRHRPAPDPVPE-RRGNRSGHTSLS 123
S S GSR+ RP G + + P P P PE R H S+S
Sbjct: 118 SSSGGSRLARRPKKGILKAQSSSSAPPPPPSPEVELLRRRRHVSIS 163
>03_02_0631 +
9969841-9969868,9969965-9970082,9970186-9970828,
9971146-9971935,9972002-9972051,9972618-9972704
Length = 571
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = -3
Query: 320 SIDTEPPGSSRPPAMSTSNMTSHSVGSRVLIRPSLGTCRLRRDRHRPAPDPVPERRGNR 144
S PP +++PP +S N+ + SR+ +P ++ P DP P ++ R
Sbjct: 110 SAKVSPPPAAKPPKLSPPNLAKATKPSRLAAKPP------KKAAPGPELDPKPRKKAQR 162
>05_04_0123 + 18210069-18213737
Length = 1222
Score = 27.9 bits (59), Expect = 4.3
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Frame = -3
Query: 431 KYLYRRISFTNPCSKFRMVS---ISSLPEKMQVLVLGDSPSIDTEPPGSSRPPAMS-TSN 264
++ Y ++F S R+ S + LPE + L S SID P S PP++ SN
Sbjct: 1077 EFCYNLVAFPTSLSYLRICSCNVLEDLPEGLGCLGALRSLSIDYNPRLKSLPPSIQRLSN 1136
Query: 263 MTSHSVGS 240
+T +G+
Sbjct: 1137 LTRLYLGT 1144
>12_02_0615 +
21242819-21243201,21244510-21244630,21244728-21244847,
21245015-21245245,21245365-21245862
Length = 450
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 340 NTCIFSGNEDMDTMRNFEQGFVKLMRRYKYLEKMFEEEMKK 462
NTC S E +D + + E+GF++ + +K EE KK
Sbjct: 373 NTCFDSEQEGVDPLSDVEEGFLRQLEHDLEADKR-EESAKK 412
>09_04_0258 - 16175258-16176069,16176111-16176414
Length = 371
Score = 27.5 bits (58), Expect = 5.7
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -3
Query: 227 RPSLGTCRLRRDRHRPAPDPVPERRGNR 144
+P G RLRR RH A P +R G R
Sbjct: 146 QPRGGAVRLRRLRHAAAVPPARQRHGRR 173
>06_01_0218 +
1647624-1647757,1648044-1648112,1648493-1648549,
1648768-1648934,1649661-1649716,1650319-1650490,
1650747-1650810,1651037-1651119,1651243-1651334,
1652028-1652134,1652398-1652461,1652630-1652770
Length = 401
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -3
Query: 191 RHRPAPDPVPERRGNRS 141
R RPAPDPV RG+R+
Sbjct: 12 RRRPAPDPVAVLRGHRA 28
>02_01_0327 -
2241228-2242509,2243227-2243247,2243299-2243614,
2244232-2244496,2245887-2245985
Length = 660
Score = 27.5 bits (58), Expect = 5.7
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = -3
Query: 374 SISSLPEKMQVLVLGDSPSIDTEPPGSSRPPAMSTSNMTSHSVGSRVLIRPSLG 213
S+S K + L +G P ++ E PG S P HSV S +I LG
Sbjct: 22 SLSGPAAKSRRLDIGLPPIMEEETPGPSMPFGHEMLGEEIHSVVSMPIIEDMLG 75
>12_02_1081 + 25914180-25914371,25918121-25919104
Length = 391
Score = 27.1 bits (57), Expect = 7.5
Identities = 14/23 (60%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
Frame = -3
Query: 224 PSLGTCRLRR-DRHRP-APDPVP 162
P LG CRLRR + HRP P+ VP
Sbjct: 11 PPLGPCRLRRQELHRPRRPNHVP 33
>03_02_0390 + 8056006-8057502
Length = 498
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 282 WRPAAAGRFGV-DGRRIAQDQHLHLLRQ*GYGHHAK 386
W AA R DG + + HLHL+R+ G+GH A+
Sbjct: 83 WALLAAARAATPDG--VLRLAHLHLIRELGHGHLAR 116
>03_01_0141 +
1116833-1117082,1117658-1118574,1119417-1119579,
1119668-1120497,1120562-1120570
Length = 722
Score = 27.1 bits (57), Expect = 7.5
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = -3
Query: 272 TSNMTSHSVGSRVLIRPSLGTCRLRRDRHRPAPDPVPERRGNRSGHTSLSHL 117
TS S +GS VL +PSL + D P P+ + G S + LSHL
Sbjct: 138 TSAAASSEIGSSVLHKPSLFPSII--DCFDKEPVPIHQSDGRYSYDSHLSHL 187
>02_05_0904 + 32644119-32644303,32644380-32644608
Length = 137
Score = 27.1 bits (57), Expect = 7.5
Identities = 21/71 (29%), Positives = 28/71 (39%)
Frame = -3
Query: 299 GSSRPPAMSTSNMTSHSVGSRVLIRPSLGTCRLRRDRHRPAPDPVPERRGNRSGHTSLSH 120
GSS P + S S+ +R+ P L R A +PE G SLS
Sbjct: 62 GSSIGPQIRPEAPPSRSLRARLSADPLLLALDPLSTDPRAAASSMPEPAATIQGSNSLSA 121
Query: 119 LFFWS*SVDPI 87
+ WS S D +
Sbjct: 122 ILSWSSSPDAL 132
>02_05_0474 - 29326168-29326396,29326473-29326657
Length = 137
Score = 27.1 bits (57), Expect = 7.5
Identities = 21/71 (29%), Positives = 28/71 (39%)
Frame = -3
Query: 299 GSSRPPAMSTSNMTSHSVGSRVLIRPSLGTCRLRRDRHRPAPDPVPERRGNRSGHTSLSH 120
GSS P + S S+ +R+ P L R A +PE G SLS
Sbjct: 62 GSSIGPQIRPEAPPSRSLRARLSADPLLLALDPLSTDPRAAASSMPEPAATIQGSNSLSA 121
Query: 119 LFFWS*SVDPI 87
+ WS S D +
Sbjct: 122 ILSWSSSPDAL 132
>08_01_0170 -
1440908-1441072,1441539-1441581,1442155-1442619,
1442714-1444149
Length = 702
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 305 PPGSSRPPAMSTSNMTSHSVGSRVLIRPSLG 213
PP S PP S + +TSHS V+ +LG
Sbjct: 282 PPSSPSPPPPSLTPITSHSRRGGVVAGATLG 312
>04_03_0397 -
15362353-15363383,15385301-15385910,15386890-15387096,
15388287-15388313,15388397-15388471
Length = 649
Score = 26.6 bits (56), Expect = 10.0
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 206 RLRRDRHRPAPDPVPE 159
R R RH P PDPV E
Sbjct: 311 RTRHGRHEPTPDPVSE 326
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,376,158
Number of Sequences: 37544
Number of extensions: 321024
Number of successful extensions: 1239
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1237
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 943260316
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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