Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0877
(469 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78540-6|CAD30431.1| 887|Caenorhabditis elegans Hypothetical pr... 31 0.31
Z78540-5|CAB01738.2| 793|Caenorhabditis elegans Hypothetical pr... 31 0.31
Z72501-3|CAD30430.1| 887|Caenorhabditis elegans Hypothetical pr... 31 0.31
AJ133838-1|CAB44432.1| 793|Caenorhabditis elegans DYC-1 protein... 31 0.31
Z74043-7|CAA98539.2| 705|Caenorhabditis elegans Hypothetical pr... 30 0.95
AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical ... 30 0.95
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 29 1.3
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 29 1.3
AL023835-4|CAD56254.1| 564|Caenorhabditis elegans Hypothetical ... 29 1.7
AL023835-3|CAD56253.1| 566|Caenorhabditis elegans Hypothetical ... 29 1.7
AL023835-2|CAA19487.2| 592|Caenorhabditis elegans Hypothetical ... 29 1.7
AL023835-1|CAA19486.1| 164|Caenorhabditis elegans Hypothetical ... 29 1.7
U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class glut... 28 2.9
AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type ion... 28 2.9
AC024763-7|AAF60517.1| 304|Caenorhabditis elegans Pdgf/vegf gro... 28 3.8
U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical p... 27 5.1
U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical p... 27 5.1
U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical pr... 27 5.1
AF106582-7|ABD94096.1| 806|Caenorhabditis elegans Hypothetical ... 27 5.1
AF106582-6|ABD94095.1| 834|Caenorhabditis elegans Hypothetical ... 27 5.1
AF016421-6|AAT92074.1| 984|Caenorhabditis elegans Hypothetical ... 27 5.1
AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical ... 27 5.1
AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical ... 27 5.1
AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical ... 27 5.1
Z81586-4|CAB04688.2| 366|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z68299-4|CAD60422.2| 367|Caenorhabditis elegans Hypothetical pr... 27 6.7
U23178-5|AAN63417.1| 439|Caenorhabditis elegans Vh1 dual-specif... 27 6.7
U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1 dual-specif... 27 6.7
U23178-3|AAK68299.1| 657|Caenorhabditis elegans Vh1 dual-specif... 27 6.7
AY585194-1|AAS91377.1| 657|Caenorhabditis elegans VH1-like phos... 27 6.7
AL117203-3|CAB55101.1| 448|Caenorhabditis elegans Hypothetical ... 27 6.7
>Z78540-6|CAD30431.1| 887|Caenorhabditis elegans Hypothetical
protein C33G3.1b protein.
Length = 887
Score = 31.5 bits (68), Expect = 0.31
Identities = 26/120 (21%), Positives = 53/120 (44%), Gaps = 8/120 (6%)
Frame = -3
Query: 449 SSNIFSKYLYRRISFTNPCSKFRMVSISSLPEKMQVLVLGDSPSIDTEPPGSSRPPAMST 270
+SN+ K + I +NP + S +++ +M+ +GD+P + PP + P +
Sbjct: 607 TSNVM-KPSHFNILMSNPLVDINVPSGAAMSSRMEQFDMGDTPGTSSTPPKKEKKP---S 662
Query: 269 SNMTSHSVGSRVLIRPSLGTCRLRRDR--------HRPAPDPVPERRGNRSGHTSLSHLF 114
S + SR+ P LG + R + +P +P +++ +T++ LF
Sbjct: 663 SGILRGENFSRMSFNPKLGREKEREQQQLMFEDTLEDDSPRSIPPSPPSKARNTTIDSLF 722
>Z78540-5|CAB01738.2| 793|Caenorhabditis elegans Hypothetical
protein C33G3.1a protein.
Length = 793
Score = 31.5 bits (68), Expect = 0.31
Identities = 26/120 (21%), Positives = 53/120 (44%), Gaps = 8/120 (6%)
Frame = -3
Query: 449 SSNIFSKYLYRRISFTNPCSKFRMVSISSLPEKMQVLVLGDSPSIDTEPPGSSRPPAMST 270
+SN+ K + I +NP + S +++ +M+ +GD+P + PP + P +
Sbjct: 513 TSNVM-KPSHFNILMSNPLVDINVPSGAAMSSRMEQFDMGDTPGTSSTPPKKEKKP---S 568
Query: 269 SNMTSHSVGSRVLIRPSLGTCRLRRDR--------HRPAPDPVPERRGNRSGHTSLSHLF 114
S + SR+ P LG + R + +P +P +++ +T++ LF
Sbjct: 569 SGILRGENFSRMSFNPKLGREKEREQQQLMFEDTLEDDSPRSIPPSPPSKARNTTIDSLF 628
>Z72501-3|CAD30430.1| 887|Caenorhabditis elegans Hypothetical
protein C33G3.1b protein.
Length = 887
Score = 31.5 bits (68), Expect = 0.31
Identities = 26/120 (21%), Positives = 53/120 (44%), Gaps = 8/120 (6%)
Frame = -3
Query: 449 SSNIFSKYLYRRISFTNPCSKFRMVSISSLPEKMQVLVLGDSPSIDTEPPGSSRPPAMST 270
+SN+ K + I +NP + S +++ +M+ +GD+P + PP + P +
Sbjct: 607 TSNVM-KPSHFNILMSNPLVDINVPSGAAMSSRMEQFDMGDTPGTSSTPPKKEKKP---S 662
Query: 269 SNMTSHSVGSRVLIRPSLGTCRLRRDR--------HRPAPDPVPERRGNRSGHTSLSHLF 114
S + SR+ P LG + R + +P +P +++ +T++ LF
Sbjct: 663 SGILRGENFSRMSFNPKLGREKEREQQQLMFEDTLEDDSPRSIPPSPPSKARNTTIDSLF 722
>AJ133838-1|CAB44432.1| 793|Caenorhabditis elegans DYC-1 protein
protein.
Length = 793
Score = 31.5 bits (68), Expect = 0.31
Identities = 26/120 (21%), Positives = 53/120 (44%), Gaps = 8/120 (6%)
Frame = -3
Query: 449 SSNIFSKYLYRRISFTNPCSKFRMVSISSLPEKMQVLVLGDSPSIDTEPPGSSRPPAMST 270
+SN+ K + I +NP + S +++ +M+ +GD+P + PP + P +
Sbjct: 513 TSNVM-KPSHFNILMSNPLVDINVPSGAAMSSRMEQFDMGDTPGTSSTPPKKEKKP---S 568
Query: 269 SNMTSHSVGSRVLIRPSLGTCRLRRDR--------HRPAPDPVPERRGNRSGHTSLSHLF 114
S + SR+ P LG + R + +P +P +++ +T++ LF
Sbjct: 569 SGILRGENFSRMSFNPKLGREKEREQQQLMFEDTLEDDSPRSIPPSPPSKARNTTIDSLF 628
>Z74043-7|CAA98539.2| 705|Caenorhabditis elegans Hypothetical
protein T19B10.5 protein.
Length = 705
Score = 29.9 bits (64), Expect = 0.95
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +3
Query: 93 VNGSRPEKEMRKRSMTRTVSATLWYRVWSGPVAISTQPTST*TRPDQNSTTDAMRSH 263
V+ S +KEMR + R+ + T V P+ + PTS T P + ++TD+ + H
Sbjct: 324 VSDSDDDKEMRYHPLFRSNTLT---HVHFNPLGTISTPTSIATTPQRCTSTDSKQKH 377
>AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical
protein Y53F4B.9 protein.
Length = 1168
Score = 29.9 bits (64), Expect = 0.95
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = -3
Query: 359 PEKMQVLVLGDSPSIDTEPPGSSRPPAMSTSNMTSHSVGSRVLIRPSLGTCRLRRDRHRP 180
P++M L + P + PP +R A S VG RV ++P L + R RP
Sbjct: 68 PKRMAQLKIAPLPLVQPPPPPRTR--ACQRPIRYSFDVGERVAVKPCLKSATKTPIRVRP 125
Query: 179 APDP-VPERR 153
A +P R+
Sbjct: 126 ADGAMIPPRK 135
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical
protein ZK688.5b protein.
Length = 1595
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = -3
Query: 377 VSISSLPEKMQVLVLGDSPSIDTE---PPGSSRPPAMSTSNMTSH 252
V +++ P + V GD+PS+ E PPGS + P S T+H
Sbjct: 610 VRVTARPGRRFVATTGDAPSVPVETLPPPGSDQQPGTS-RRFTTH 653
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical
protein ZK688.5a protein.
Length = 1620
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = -3
Query: 377 VSISSLPEKMQVLVLGDSPSIDTE---PPGSSRPPAMSTSNMTSH 252
V +++ P + V GD+PS+ E PPGS + P S T+H
Sbjct: 610 VRVTARPGRRFVATTGDAPSVPVETLPPPGSDQQPGTS-RRFTTH 653
>AL023835-4|CAD56254.1| 564|Caenorhabditis elegans Hypothetical
protein Y37A1B.2d protein.
Length = 564
Score = 29.1 bits (62), Expect = 1.7
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = -3
Query: 305 PPGSSRPPAMSTSNMTSHSVGSRVLIRPSLGTCRLRRDRHRPAPDPVPE 159
PP SS PPA S+ S V PS G + H+P P VPE
Sbjct: 73 PPTSSGPPAASSRPFDDWGGASEVAAPPSYGA----QHHHQPTPS-VPE 116
>AL023835-3|CAD56253.1| 566|Caenorhabditis elegans Hypothetical
protein Y37A1B.2c protein.
Length = 566
Score = 29.1 bits (62), Expect = 1.7
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = -3
Query: 305 PPGSSRPPAMSTSNMTSHSVGSRVLIRPSLGTCRLRRDRHRPAPDPVPE 159
PP SS PPA S+ S V PS G + H+P P VPE
Sbjct: 73 PPTSSGPPAASSRPFDDWGGASEVAAPPSYGA----QHHHQPTPS-VPE 116
>AL023835-2|CAA19487.2| 592|Caenorhabditis elegans Hypothetical
protein Y37A1B.2b protein.
Length = 592
Score = 29.1 bits (62), Expect = 1.7
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = -3
Query: 305 PPGSSRPPAMSTSNMTSHSVGSRVLIRPSLGTCRLRRDRHRPAPDPVPE 159
PP SS PPA S+ S V PS G + H+P P VPE
Sbjct: 99 PPTSSGPPAASSRPFDDWGGASEVAAPPSYGA----QHHHQPTPS-VPE 142
>AL023835-1|CAA19486.1| 164|Caenorhabditis elegans Hypothetical
protein Y37A1B.2a protein.
Length = 164
Score = 29.1 bits (62), Expect = 1.7
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = -3
Query: 305 PPGSSRPPAMSTSNMTSHSVGSRVLIRPSLGTCRLRRDRHRPAPDPVPE 159
PP SS PPA S+ S V PS G + H+P P VPE
Sbjct: 73 PPTSSGPPAASSRPFDDWGGASEVAAPPSYGA----QHHHQPTPS-VPE 116
>U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class
glutamate receptor protein1 protein.
Length = 1025
Score = 28.3 bits (60), Expect = 2.9
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = -3
Query: 365 SLPEKMQVLVLGDSPSIDTEPPGSSRPPAMSTSNMTSHSVGSRVLIRPSLGTCRL 201
SLP+ ++V+ + D P + T P GS A + + S+ ++++ +C L
Sbjct: 392 SLPKHLRVVTVADPPFVYTTPIGSPSQCAELGNTVVEWSIFDKIVVSGPWYSCPL 446
>AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type
ionotropic glutamatereceptor NMR-1 protein.
Length = 1025
Score = 28.3 bits (60), Expect = 2.9
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = -3
Query: 365 SLPEKMQVLVLGDSPSIDTEPPGSSRPPAMSTSNMTSHSVGSRVLIRPSLGTCRL 201
SLP+ ++V+ + D P + T P GS A + + S+ ++++ +C L
Sbjct: 392 SLPKHLRVVTVADPPFVYTTPIGSPSQCAELGNTVVEWSIFDKIVVSGPWYSCPL 446
>AC024763-7|AAF60517.1| 304|Caenorhabditis elegans Pdgf/vegf growth
factor relatedprotein 1 protein.
Length = 304
Score = 27.9 bits (59), Expect = 3.8
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +2
Query: 341 TPASSPAMRIWTPC--EISNRDS*N*CVGTSTW 433
TP +P + C E +N++ N CVG +TW
Sbjct: 203 TPQCAPGFVVGRSCTCECANKEERNNCVGNATW 235
>U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical
protein C23H3.9a protein.
Length = 503
Score = 27.5 bits (58), Expect = 5.1
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +3
Query: 138 TRTVSATLWYRVWSGPVAISTQPTST*TRPDQNSTT 245
T T +AT P +TQPT+T T P +TT
Sbjct: 212 TTTTTATTTTTTTPLPTTTTTQPTTTTTEPTTTTTT 247
>U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical
protein C23H3.9b protein.
Length = 489
Score = 27.5 bits (58), Expect = 5.1
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +3
Query: 138 TRTVSATLWYRVWSGPVAISTQPTST*TRPDQNSTT 245
T T +AT P +TQPT+T T P +TT
Sbjct: 208 TTTTTATTTTTTTPLPTTTTTQPTTTTTEPTTTTTT 243
>U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical
protein C23H3.9d protein.
Length = 432
Score = 27.5 bits (58), Expect = 5.1
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +3
Query: 138 TRTVSATLWYRVWSGPVAISTQPTST*TRPDQNSTT 245
T T +AT P +TQPT+T T P +TT
Sbjct: 151 TTTTTATTTTTTTPLPTTTTTQPTTTTTEPTTTTTT 186
>AF106582-7|ABD94096.1| 806|Caenorhabditis elegans Hypothetical
protein W05F2.4b protein.
Length = 806
Score = 27.5 bits (58), Expect = 5.1
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -3
Query: 299 GSSRPPAMSTSNMTSHSVGSRVLIRP 222
GSSRPP + S M+ + + + +I+P
Sbjct: 727 GSSRPPGSAASLMSLNKIANETIIKP 752
>AF106582-6|ABD94095.1| 834|Caenorhabditis elegans Hypothetical
protein W05F2.4a protein.
Length = 834
Score = 27.5 bits (58), Expect = 5.1
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -3
Query: 299 GSSRPPAMSTSNMTSHSVGSRVLIRP 222
GSSRPP + S M+ + + + +I+P
Sbjct: 755 GSSRPPGSAASLMSLNKIANETIIKP 780
>AF016421-6|AAT92074.1| 984|Caenorhabditis elegans Hypothetical
protein F44E7.4d protein.
Length = 984
Score = 27.5 bits (58), Expect = 5.1
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +3
Query: 75 KNQYYRVNGSRPEKEMRKRSMTRTVSATLWYRVW 176
KN+Y N + +E K R +S W RVW
Sbjct: 552 KNEYIATNFDQKPRESVKNEHPRLISDDGWSRVW 585
>AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical
protein F44E7.4c protein.
Length = 1008
Score = 27.5 bits (58), Expect = 5.1
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +3
Query: 75 KNQYYRVNGSRPEKEMRKRSMTRTVSATLWYRVW 176
KN+Y N + +E K R +S W RVW
Sbjct: 493 KNEYIATNFDQKPRESVKNEHPRLISDDGWSRVW 526
>AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical
protein F44E7.4a protein.
Length = 1067
Score = 27.5 bits (58), Expect = 5.1
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +3
Query: 75 KNQYYRVNGSRPEKEMRKRSMTRTVSATLWYRVW 176
KN+Y N + +E K R +S W RVW
Sbjct: 552 KNEYIATNFDQKPRESVKNEHPRLISDDGWSRVW 585
>AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical
protein F44E7.4b protein.
Length = 1051
Score = 27.5 bits (58), Expect = 5.1
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +3
Query: 75 KNQYYRVNGSRPEKEMRKRSMTRTVSATLWYRVW 176
KN+Y N + +E K R +S W RVW
Sbjct: 552 KNEYIATNFDQKPRESVKNEHPRLISDDGWSRVW 585
>Z81586-4|CAB04688.2| 366|Caenorhabditis elegans Hypothetical
protein T05F1.5 protein.
Length = 366
Score = 27.1 bits (57), Expect = 6.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 326 SPSIDTEPPGSSRPPAMSTSNMTSHSVGSR 237
SPS + P SS PP+ ++++HS SR
Sbjct: 94 SPSPTSSPQLSSPPPSTMVDSLSTHSESSR 123
>Z68299-4|CAD60422.2| 367|Caenorhabditis elegans Hypothetical
protein T04B2.7 protein.
Length = 367
Score = 27.1 bits (57), Expect = 6.7
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = -3
Query: 338 VLGDSPSIDTEPPGSSRPPAMSTSNMTSHSVGSRVLI--RPSLGTCRLRRDRHRPAPDPV 165
V GDS D PPG+ P S ++ S + S+ LI R + D++ P P
Sbjct: 31 VTGDSHEDDKPPPGNQSPNDKSRESVFSGNSRSKSLIKRRGIREEQKTTEDKNVEQPSPN 90
Query: 164 PERR 153
P +
Sbjct: 91 PNSK 94
>U23178-5|AAN63417.1| 439|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform c
protein.
Length = 439
Score = 27.1 bits (57), Expect = 6.7
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = -3
Query: 413 ISFTNPCSKFRMVSISSLPEKMQVLVLGDSPSIDTEPPGSSRPPAMSTSNMTSHSVGSRV 234
++FTNPC ++ ++S +V++ +P+ + SS P+ S+ S S S V
Sbjct: 317 LNFTNPCFNSPIIPVAS--SSREVILTLPTPAASSSSSTSSE-PSFDFSSFESSSSSSIV 373
Query: 233 LIRP 222
+ P
Sbjct: 374 VENP 377
>U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform b
protein.
Length = 606
Score = 27.1 bits (57), Expect = 6.7
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = -3
Query: 413 ISFTNPCSKFRMVSISSLPEKMQVLVLGDSPSIDTEPPGSSRPPAMSTSNMTSHSVGSRV 234
++FTNPC ++ ++S +V++ +P+ + SS P+ S+ S S S V
Sbjct: 421 LNFTNPCFNSPIIPVAS--SSREVILTLPTPAASSSSSTSSE-PSFDFSSFESSSSSSIV 477
Query: 233 LIRP 222
+ P
Sbjct: 478 VENP 481
>U23178-3|AAK68299.1| 657|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform a
protein.
Length = 657
Score = 27.1 bits (57), Expect = 6.7
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = -3
Query: 413 ISFTNPCSKFRMVSISSLPEKMQVLVLGDSPSIDTEPPGSSRPPAMSTSNMTSHSVGSRV 234
++FTNPC ++ ++S +V++ +P+ + SS P+ S+ S S S V
Sbjct: 472 LNFTNPCFNSPIIPVAS--SSREVILTLPTPAASSSSSTSSE-PSFDFSSFESSSSSSIV 528
Query: 233 LIRP 222
+ P
Sbjct: 529 VENP 532
>AY585194-1|AAS91377.1| 657|Caenorhabditis elegans VH1-like
phosphatase 1 protein.
Length = 657
Score = 27.1 bits (57), Expect = 6.7
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = -3
Query: 413 ISFTNPCSKFRMVSISSLPEKMQVLVLGDSPSIDTEPPGSSRPPAMSTSNMTSHSVGSRV 234
++FTNPC ++ ++S +V++ +P+ + SS P+ S+ S S S V
Sbjct: 472 LNFTNPCFNSPIIPVAS--SSREVILTLPTPAASSSSSTSSE-PSFDFSSFESSSSSSIV 528
Query: 233 LIRP 222
+ P
Sbjct: 529 VENP 532
>AL117203-3|CAB55101.1| 448|Caenorhabditis elegans Hypothetical
protein Y48C3A.4 protein.
Length = 448
Score = 27.1 bits (57), Expect = 6.7
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -3
Query: 404 TNPCSKFRMVSISSLPEKMQVLVLGDSPSIDTEPPGSSRPPAMSTS 267
T P K R +S S+P + V VL +PS+ GS PA S S
Sbjct: 162 TTPLEKMRKLSSVSMPAEF-VSVL-QTPSVSASGSGSGSLPASSPS 205
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,021,097
Number of Sequences: 27780
Number of extensions: 241846
Number of successful extensions: 1024
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 839684522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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