Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0875
(731 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P20227 Cluster: TATA-box-binding protein; n=7; Eukaryot... 107 3e-22
UniRef50_Q91YM5 Cluster: TATA-box-binding protein; n=15; Coeloma... 95 2e-18
UniRef50_P29037 Cluster: TATA-box-binding protein; n=168; Eukary... 95 2e-18
UniRef50_P20226 Cluster: TATA-box-binding protein; n=13; Bilater... 95 2e-18
UniRef50_A2Z7N4 Cluster: TATA-box-binding protein; n=1; Oryza sa... 84 4e-15
UniRef50_Q5S251 Cluster: TATA-box-binding protein; n=1; Volvox c... 79 1e-13
UniRef50_Q6BIC6 Cluster: Similarities with CA2369|CaTBP1 Candida... 75 2e-12
UniRef50_Q6JAE2 Cluster: TATA-box-binding protein; n=2; Zea mays... 72 1e-11
UniRef50_Q59LW5 Cluster: Putative uncharacterized protein; n=1; ... 64 3e-09
UniRef50_Q5CW12 Cluster: TATA-box factor binding protein; n=3; C... 61 3e-08
UniRef50_Q00YA0 Cluster: TATA-box-binding protein; n=1; Ostreoco... 58 2e-07
UniRef50_Q5C0N4 Cluster: TATA-box-binding protein; n=1; Schistos... 57 4e-07
UniRef50_A7UFC2 Cluster: TBP-related factor; n=3; Entamoeba hist... 57 5e-07
UniRef50_P52653 Cluster: TATA-box-binding protein; n=3; Entamoeb... 56 1e-06
UniRef50_Q4N840 Cluster: Transcription initiation factor TFIID, ... 54 4e-06
UniRef50_Q27896 Cluster: TBP-related factor; n=4; Diptera|Rep: T... 54 4e-06
UniRef50_A0CRU8 Cluster: Chromosome undetermined scaffold_25, wh... 52 1e-05
UniRef50_Q2H1M3 Cluster: Putative uncharacterized protein; n=1; ... 52 2e-05
UniRef50_A7AVR8 Cluster: TATA-box binding protein; n=1; Babesia ... 51 3e-05
UniRef50_A2DQT7 Cluster: Putative uncharacterized protein; n=1; ... 49 1e-04
UniRef50_Q3LVY6 Cluster: TATA binding protein of transcription f... 47 4e-04
UniRef50_Q9YAT1 Cluster: TATA-box-binding protein; n=2; Desulfur... 42 0.012
UniRef50_Q8ZVR0 Cluster: TATA-box-binding protein; n=15; Thermop... 42 0.016
UniRef50_A2G4N7 Cluster: Putative uncharacterized protein; n=1; ... 39 0.15
UniRef50_P32086 Cluster: TATA-box-binding protein; n=6; Plasmodi... 38 0.25
UniRef50_Q237D3 Cluster: TATA-box binding protein; n=1; Tetrahym... 38 0.33
UniRef50_Q945B3 Cluster: TATA box-binding protein-like protein; ... 37 0.44
UniRef50_Q9V024 Cluster: TATA-box-binding protein; n=6; Thermoco... 37 0.44
UniRef50_Q9W2N8 Cluster: CG10543-PA, isoform A; n=5; Drosophila ... 36 0.77
UniRef50_A7RQK0 Cluster: Predicted protein; n=1; Nematostella ve... 36 0.77
UniRef50_Q8ID63 Cluster: Putative uncharacterized protein MAL13P... 36 1.4
UniRef50_UPI00015BAE85 Cluster: TATA binding protein of transcri... 35 1.8
UniRef50_O51971 Cluster: TbpA; n=2; Halobacterium salinarum|Rep:... 35 1.8
UniRef50_Q9HN56 Cluster: TATA-box-binding protein E; n=11; Eurya... 35 2.4
UniRef50_Q7SDE7 Cluster: Putative uncharacterized protein NCU093... 34 4.1
UniRef50_O52018 Cluster: TATA-box-binding protein D; n=26; Eurya... 34 4.1
UniRef50_Q4UMX8 Cluster: Valyl-tRNA synthetase; n=1; Rickettsia ... 34 4.1
UniRef50_A6SKR0 Cluster: Putative uncharacterized protein; n=2; ... 33 5.5
UniRef50_Q1YSS1 Cluster: Putative uncharacterized protein; n=1; ... 33 7.2
UniRef50_Q82ZH6 Cluster: Pheromone binding protein; n=1; Enteroc... 33 9.5
UniRef50_Q92GR9 Cluster: Valyl-tRNA synthetase; n=18; Rickettsia... 33 9.5
>UniRef50_P20227 Cluster: TATA-box-binding protein; n=7;
Eukaryota|Rep: TATA-box-binding protein - Drosophila
melanogaster (Fruit fly)
Length = 353
Score = 107 bits (257), Expect = 3e-22
Identities = 51/55 (92%), Positives = 52/55 (94%)
Frame = +3
Query: 567 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIM 731
PMTP TP SADPGI+PQLQNIVSTVNL CKLDLKKIALHARNAEYNPKRFAAVIM
Sbjct: 162 PMTPATPGSADPGIVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIM 216
>UniRef50_Q91YM5 Cluster: TATA-box-binding protein; n=15;
Coelomata|Rep: TATA-box-binding protein - Mus musculus
(Mouse)
Length = 260
Score = 94.7 bits (225), Expect = 2e-18
Identities = 45/55 (81%), Positives = 47/55 (85%)
Frame = +3
Query: 567 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIM 731
P+TP TP S GI+PQLQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAVIM
Sbjct: 125 PITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIM 179
>UniRef50_P29037 Cluster: TATA-box-binding protein; n=168;
Eukaryota|Rep: TATA-box-binding protein - Mus musculus
(Mouse)
Length = 316
Score = 94.7 bits (225), Expect = 2e-18
Identities = 45/55 (81%), Positives = 47/55 (85%)
Frame = +3
Query: 567 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIM 731
P+TP TP S GI+PQLQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAVIM
Sbjct: 125 PITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIM 179
>UniRef50_P20226 Cluster: TATA-box-binding protein; n=13;
Bilateria|Rep: TATA-box-binding protein - Homo sapiens
(Human)
Length = 339
Score = 94.7 bits (225), Expect = 2e-18
Identities = 45/55 (81%), Positives = 47/55 (85%)
Frame = +3
Query: 567 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIM 731
P+TP TP S GI+PQLQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAVIM
Sbjct: 148 PITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIM 202
>UniRef50_A2Z7N4 Cluster: TATA-box-binding protein; n=1; Oryza
sativa (indica cultivar-group)|Rep: TATA-box-binding
protein - Oryza sativa subsp. indica (Rice)
Length = 264
Score = 83.8 bits (198), Expect = 4e-15
Identities = 40/52 (76%), Positives = 44/52 (84%)
Frame = +3
Query: 576 PLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIM 731
P+ + GI+P LQNIVSTVNLDC+LDLKKIAL ARNAEYNPKRFAAVIM
Sbjct: 35 PVDLVEHPSGIVPTLQNIVSTVNLDCRLDLKKIALQARNAEYNPKRFAAVIM 86
>UniRef50_Q5S251 Cluster: TATA-box-binding protein; n=1; Volvox
carteri f. nagariensis|Rep: TATA-box-binding protein -
Volvox carteri f. nagariensis
Length = 340
Score = 78.6 bits (185), Expect = 1e-13
Identities = 36/43 (83%), Positives = 40/43 (93%)
Frame = +3
Query: 603 GILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIM 731
GI PQLQN+V+TVNL KLDLK+IA+HARNAEYNPKRFAAVIM
Sbjct: 32 GITPQLQNVVATVNLGTKLDLKEIAMHARNAEYNPKRFAAVIM 74
>UniRef50_Q6BIC6 Cluster: Similarities with CA2369|CaTBP1 Candida
albicans CaTBP1; n=1; Debaryomyces hansenii|Rep:
Similarities with CA2369|CaTBP1 Candida albicans CaTBP1
- Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 120
Score = 74.9 bits (176), Expect = 2e-12
Identities = 35/46 (76%), Positives = 39/46 (84%)
Frame = +3
Query: 594 ADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIM 731
A GI+P LQNIV+TVNLDC+LDLK IALHAR+AEYNPKR VIM
Sbjct: 62 ATSGIVPTLQNIVATVNLDCRLDLKTIALHARDAEYNPKRLEDVIM 107
>UniRef50_Q6JAE2 Cluster: TATA-box-binding protein; n=2; Zea
mays|Rep: TATA-box-binding protein - Zea mays (Maize)
Length = 392
Score = 72.1 bits (169), Expect = 1e-11
Identities = 34/37 (91%), Positives = 35/37 (94%)
Frame = +3
Query: 621 QNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIM 731
+NIVSTVNLDCKLDLK IAL ARNAEYNPKRFAAVIM
Sbjct: 173 RNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIM 209
>UniRef50_Q59LW5 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 148
Score = 64.1 bits (149), Expect = 3e-09
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -2
Query: 730 IITAAKRLGLYSALRACNAIFFKSNLQSRFTVETMFCNCGKIP 602
IITAAKR GLYSA AC AI +S+ QSRFTV T+FCN G IP
Sbjct: 40 IITAAKRFGLYSAFLACKAIVLRSSRQSRFTVATIFCNVGTIP 82
>UniRef50_Q5CW12 Cluster: TATA-box factor binding protein; n=3;
Cryptosporidium|Rep: TATA-box factor binding protein -
Cryptosporidium parvum Iowa II
Length = 249
Score = 60.9 bits (141), Expect = 3e-08
Identities = 25/42 (59%), Positives = 36/42 (85%)
Frame = +3
Query: 606 ILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIM 731
I P++QNI+++V+L C+LDL+ IA+ ARNAEYNPK+ AV+M
Sbjct: 68 ITPEIQNIIASVHLQCELDLRMIAISARNAEYNPKKVNAVVM 109
>UniRef50_Q00YA0 Cluster: TATA-box-binding protein; n=1;
Ostreococcus tauri|Rep: TATA-box-binding protein -
Ostreococcus tauri
Length = 258
Score = 58.0 bits (134), Expect = 2e-07
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +3
Query: 621 QNIVSTVNLDCKLDLKKIALHARNAEYNPK 710
+NIV+TVNLDCKLDLK IA HARN EYNPK
Sbjct: 50 RNIVATVNLDCKLDLKTIAFHARNVEYNPK 79
>UniRef50_Q5C0N4 Cluster: TATA-box-binding protein; n=1; Schistosoma
japonicum|Rep: TATA-box-binding protein - Schistosoma
japonicum (Blood fluke)
Length = 227
Score = 57.2 bits (132), Expect = 4e-07
Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Frame = +3
Query: 510 MIAAGNLSS--QQMLSQASPAPMTPLTPLSADPGIL-PQLQNIVSTVNLDCKLDLKKIAL 680
MI G+++S +QM Q P + L GI P + N+VSTV+L C ++L+K+ L
Sbjct: 16 MITEGSINSCTKQMAPQRPVGPDSDSLDLLC--GIRKPVIHNMVSTVDLGCPIELRKLVL 73
Query: 681 HARNAEYNPKRFAAVIM 731
H R+AEYNP+RF V++
Sbjct: 74 HVRSAEYNPRRFPGVVI 90
>UniRef50_A7UFC2 Cluster: TBP-related factor; n=3; Entamoeba
histolytica|Rep: TBP-related factor - Entamoeba
histolytica
Length = 216
Score = 56.8 bits (131), Expect = 5e-07
Identities = 26/62 (41%), Positives = 39/62 (62%)
Frame = +3
Query: 546 LSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAV 725
+S + P+ P+ + P +QNIV+TV LDC ++L+ + RNAEYNPKRF A+
Sbjct: 17 ISSNNNKPIIKQLPVPTNEIEKPVIQNIVATVELDCTINLQDVVRRVRNAEYNPKRFGAL 76
Query: 726 IM 731
I+
Sbjct: 77 II 78
>UniRef50_P52653 Cluster: TATA-box-binding protein; n=3; Entamoeba
histolytica|Rep: TATA-box-binding protein - Entamoeba
histolytica
Length = 234
Score = 55.6 bits (128), Expect = 1e-06
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = +3
Query: 612 PQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIM 731
P++ N+VST L KL+L+KI ARNAEYNPKRFA IM
Sbjct: 54 PEIVNVVSTFQLGVKLELRKIVQKARNAEYNPKRFAGAIM 93
>UniRef50_Q4N840 Cluster: Transcription initiation factor TFIID,
putative; n=2; Theileria|Rep: Transcription initiation
factor TFIID, putative - Theileria parva
Length = 222
Score = 54.0 bits (124), Expect = 4e-06
Identities = 25/58 (43%), Positives = 41/58 (70%)
Frame = +3
Query: 558 SPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIM 731
+P + L L + +P +QNIV++V+L +LDL++IA+ RNAEYNPK+F A+++
Sbjct: 26 NPQVLNKLQQLPFNNMNVPMVQNIVASVHLGEELDLREIAISTRNAEYNPKKFNALVL 83
>UniRef50_Q27896 Cluster: TBP-related factor; n=4; Diptera|Rep:
TBP-related factor - Drosophila melanogaster (Fruit fly)
Length = 224
Score = 54.0 bits (124), Expect = 4e-06
Identities = 29/75 (38%), Positives = 44/75 (58%)
Frame = +3
Query: 507 SMIAAGNLSSQQMLSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHA 686
++ A N ++ + P+ + P A I +LQNIV+T +++C+LDLK I
Sbjct: 16 NVAATSNAAANPHAALQPQQPVALVEPKDAQHEI--RLQNIVATFSVNCELDLKAINSRT 73
Query: 687 RNAEYNPKRFAAVIM 731
RN+EY+PKRF VIM
Sbjct: 74 RNSEYSPKRFRGVIM 88
>UniRef50_A0CRU8 Cluster: Chromosome undetermined scaffold_25, whole
genome shotgun sequence; n=2; Eukaryota|Rep: Chromosome
undetermined scaffold_25, whole genome shotgun sequence
- Paramecium tetraurelia
Length = 201
Score = 52.4 bits (120), Expect = 1e-05
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = +3
Query: 612 PQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIM 731
P++QN+VSTV+L +L+L I+ AR AEYNPKRF+AVIM
Sbjct: 25 PKIQNVVSTVDLGTELNLVVISNGARMAEYNPKRFSAVIM 64
>UniRef50_Q2H1M3 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 242
Score = 51.6 bits (118), Expect = 2e-05
Identities = 22/40 (55%), Positives = 32/40 (80%)
Frame = +3
Query: 612 PQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIM 731
P +QN+V+TV+L C+LDL+ I+ ARN EYN ++F A+IM
Sbjct: 35 PIIQNVVATVDLGCRLDLRLISEQARNVEYNRRKFHALIM 74
>UniRef50_A7AVR8 Cluster: TATA-box binding protein; n=1; Babesia
bovis|Rep: TATA-box binding protein - Babesia bovis
Length = 277
Score = 50.8 bits (116), Expect = 3e-05
Identities = 21/40 (52%), Positives = 34/40 (85%)
Frame = +3
Query: 612 PQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIM 731
P +QNIV++V+L ++DL++IA+ RNAEYNP++F A+I+
Sbjct: 99 PVVQNIVASVHLGNEIDLREIAISTRNAEYNPRKFNALIL 138
>UniRef50_A2DQT7 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 235
Score = 48.8 bits (111), Expect = 1e-04
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Frame = +3
Query: 537 QQMLSQASPAPMTPLTPLSADPGI------LPQLQNIVSTVNLDCKLDLKKIALHARNAE 698
+Q++ +A +TP S I +P++ NIV+ V+ CKLDL KI RN+E
Sbjct: 21 EQLVKEAQEESEEEITPESIQRNISLNQPPIPKVVNIVACVDYGCKLDLLKITSSTRNSE 80
Query: 699 YNPKRFAAVIM 731
YNP RF A +
Sbjct: 81 YNPIRFPAATL 91
>UniRef50_Q3LVY6 Cluster: TATA binding protein of transcription
factor IID; n=1; Bigelowiella natans|Rep: TATA binding
protein of transcription factor IID - Bigelowiella
natans (Pedinomonas minutissima) (Chlorarachnion
sp.(strain CCMP 621))
Length = 204
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = +3
Query: 615 QLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIM 731
++ N+V +V LD LDLKKIAL ++N E+N KRF +IM
Sbjct: 19 KIHNVVLSVRLDSILDLKKIALRSKNTEFNSKRFHGLIM 57
>UniRef50_Q9YAT1 Cluster: TATA-box-binding protein; n=2;
Desulfurococcales|Rep: TATA-box-binding protein -
Aeropyrum pernix
Length = 203
Score = 42.3 bits (95), Expect = 0.012
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = +3
Query: 585 PLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVI 728
P+S P I Q+QNIV++ NL +DL+K AL N+ Y P++F +I
Sbjct: 107 PISGKPQI--QIQNIVASANLKVYIDLEKAALEFENSLYEPEQFPGLI 152
Score = 34.3 bits (75), Expect = 3.1
Identities = 14/38 (36%), Positives = 26/38 (68%)
Frame = +3
Query: 615 QLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVI 728
+++NIV+TV L+ +LDL I ++ +YNP +F ++
Sbjct: 24 KIENIVATVILENQLDLNLIETKIQDVDYNPDQFPGLV 61
>UniRef50_Q8ZVR0 Cluster: TATA-box-binding protein; n=15;
Thermoprotei|Rep: TATA-box-binding protein - Pyrobaculum
aerophilum
Length = 199
Score = 41.9 bits (94), Expect = 0.016
Identities = 18/39 (46%), Positives = 29/39 (74%)
Frame = +3
Query: 615 QLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIM 731
+++NIV+TVNL +LDL+++A AEYNP +F +I+
Sbjct: 9 RIENIVATVNLGVELDLEQLAERLTMAEYNPDQFPGLIL 47
Score = 37.5 bits (83), Expect = 0.33
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +3
Query: 597 DPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVI 728
DP + Q+QNIV++ NL ++DL++ L NA Y P++F +I
Sbjct: 96 DPEV--QIQNIVASGNLHAEVDLEQAVLMLENAMYEPEQFPGLI 137
>UniRef50_A2G4N7 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 233
Score = 38.7 bits (86), Expect = 0.15
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +3
Query: 612 PQLQNIVSTVNLDC-KLDLKKIALHARNAEYNPKRFAAVIM 731
P++ N+++ C KL+L IA RNAEY PKR AV++
Sbjct: 49 PKVVNVIALAQYSCNKLNLVSIASTIRNAEYKPKRIKAVVI 89
>UniRef50_P32086 Cluster: TATA-box-binding protein; n=6;
Plasmodium|Rep: TATA-box-binding protein - Plasmodium
falciparum
Length = 228
Score = 37.9 bits (84), Expect = 0.25
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = +3
Query: 618 LQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIM 731
+ NI+S+ NL ++L+ +A+ RNAEYNP + +I+
Sbjct: 52 IHNIISSANLCIDINLRLVAVSIRNAEYNPSKINTLII 89
>UniRef50_Q237D3 Cluster: TATA-box binding protein; n=1; Tetrahymena
thermophila SB210|Rep: TATA-box binding protein -
Tetrahymena thermophila SB210
Length = 231
Score = 37.5 bits (83), Expect = 0.33
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 10/50 (20%)
Frame = +3
Query: 612 PQLQNIVSTVNLDCK----------LDLKKIALHARNAEYNPKRFAAVIM 731
P++QN+V+T+ + + DL++IA RN +YNPKRF AV M
Sbjct: 14 PKIQNVVATIKMIRQDGNSSKQKQTFDLQEIAQKCRNTQYNPKRFPAVFM 63
>UniRef50_Q945B3 Cluster: TATA box-binding protein-like protein;
n=1; Crypthecodinium cohnii|Rep: TATA box-binding
protein-like protein - Crypthecodinium cohnii
(Dinoflagellate)
Length = 220
Score = 37.1 bits (82), Expect = 0.44
Identities = 13/35 (37%), Positives = 27/35 (77%)
Frame = +3
Query: 627 IVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIM 731
I++ NL C++DL+++A R+AEYNP++ +++ +
Sbjct: 48 IMAKFNLRCEIDLRQLAFALRHAEYNPRKHSSLTL 82
>UniRef50_Q9V024 Cluster: TATA-box-binding protein; n=6;
Thermococcaceae|Rep: TATA-box-binding protein -
Pyrococcus abyssi
Length = 191
Score = 37.1 bits (82), Expect = 0.44
Identities = 15/38 (39%), Positives = 28/38 (73%)
Frame = +3
Query: 615 QLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVI 728
+++NIV++V+L +LDL+K+ N++YNP+ F +I
Sbjct: 10 RIENIVASVDLFAQLDLEKVLDICPNSKYNPEEFPGII 47
>UniRef50_Q9W2N8 Cluster: CG10543-PA, isoform A; n=5; Drosophila
melanogaster|Rep: CG10543-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 1634
Score = 36.3 bits (80), Expect = 0.77
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +3
Query: 465 ATDDAASNSTKYDVSMIAAGNLSSQQMLSQASPAPMTPLTPLSADPGILPQ 617
A+ AA++ K + AA SSQQ + S A TP P+S PG L Q
Sbjct: 1011 ASKKAATSKAKAQAAAAAAAAASSQQQQQKGSAATPTPPPPVSTTPGCLQQ 1061
>UniRef50_A7RQK0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 707
Score = 36.3 bits (80), Expect = 0.77
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 498 YDVSMIAAGNLSSQQMLSQASPAPMTPLTP 587
YD + + GN SS + S A +PMTPLTP
Sbjct: 456 YDTTTVTNGNASSNETTSSAPASPMTPLTP 485
>UniRef50_Q8ID63 Cluster: Putative uncharacterized protein
MAL13P1.323; n=2; Plasmodium|Rep: Putative
uncharacterized protein MAL13P1.323 - Plasmodium
falciparum (isolate 3D7)
Length = 3265
Score = 35.5 bits (78), Expect = 1.4
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +2
Query: 200 KESKERKMDHMLPSPYNILE*VHHCINLKKTSKSCLMQCNSNSFNSNSPRHN 355
K K+ +M+H+ +PYN ++ + CINLK K+ +M+ S SN+ N
Sbjct: 601 KNKKKGQMNHIKSNPYNDIK-SNECINLKNGDKNNIMRNYKTSIISNNNNDN 651
>UniRef50_UPI00015BAE85 Cluster: TATA binding protein of
transcription factor TFIID; n=1; Ignicoccus hospitalis
KIN4/I|Rep: TATA binding protein of transcription factor
TFIID - Ignicoccus hospitalis KIN4/I
Length = 207
Score = 35.1 bits (77), Expect = 1.8
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +3
Query: 594 ADPGILPQLQNIVSTVNLDCKLDLKKIALH-ARNAEYNPKRFAAVI 728
A P I +++NIV+TV++D +DL+KI N EY+P +F +I
Sbjct: 7 AKPSI--KIENIVATVSIDQNIDLEKIEKEFDSNVEYDPDQFPGLI 50
Score = 34.7 bits (76), Expect = 2.4
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +3
Query: 615 QLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVI 728
Q+QNIV++ NL ++ L+K A N+ Y P++F +I
Sbjct: 105 QIQNIVASANLGVEVHLEKAAYLLENSMYEPEQFPGLI 142
>UniRef50_O51971 Cluster: TbpA; n=2; Halobacterium salinarum|Rep:
TbpA - Halobacterium salinarium (Halobacterium halobium)
Length = 100
Score = 35.1 bits (77), Expect = 1.8
Identities = 12/44 (27%), Positives = 29/44 (65%)
Frame = +3
Query: 597 DPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVI 728
DP ++N+V++ ++ +LDL ++A+ A+Y+P++F ++
Sbjct: 3 DPKDTITIENVVASTAIEQELDLSRVAMDLEGADYDPEQFPGLV 46
>UniRef50_Q9HN56 Cluster: TATA-box-binding protein E; n=11;
Euryarchaeota|Rep: TATA-box-binding protein E -
Halobacterium salinarium (Halobacterium halobium)
Length = 186
Score = 34.7 bits (76), Expect = 2.4
Identities = 12/44 (27%), Positives = 28/44 (63%)
Frame = +3
Query: 597 DPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVI 728
DP ++N+V++ + +LDL+ +A+ A+Y+P++F ++
Sbjct: 3 DPKETINIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLV 46
>UniRef50_Q7SDE7 Cluster: Putative uncharacterized protein
NCU09325.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU09325.1 - Neurospora crassa
Length = 934
Score = 33.9 bits (74), Expect = 4.1
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +3
Query: 450 QLCNSATDDAASNSTKYDVSMIAAGNLSSQQMLSQASPAPMTPLTPLSAD 599
Q+ N T+D +++ D S+ +LS ++ SQ PAP P TP + D
Sbjct: 329 QVANLLTNDMDTDADHED-SISMTSSLSDEEQFSQYPPAPPAPFTPFTLD 377
>UniRef50_O52018 Cluster: TATA-box-binding protein D; n=26;
Euryarchaeota|Rep: TATA-box-binding protein D -
Halobacterium salinarium (Halobacterium halobium)
Length = 186
Score = 33.9 bits (74), Expect = 4.1
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +3
Query: 615 QLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVI 728
Q++N+V++ +L +L L+++A AEYNP F VI
Sbjct: 9 QIENVVASTDLSQELALEQLATDLPGAEYNPGDFPGVI 46
>UniRef50_Q4UMX8 Cluster: Valyl-tRNA synthetase; n=1; Rickettsia
felis|Rep: Valyl-tRNA synthetase - Rickettsia felis
(Rickettsia azadi)
Length = 859
Score = 33.9 bits (74), Expect = 4.1
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +2
Query: 320 SNSFNSNSPRHNRHLPLWVRRQL*DLAQSWGLHRGLCTHMHQ 445
S+ F N RH++ P+ +R Q ++ ++W + L H+HQ
Sbjct: 521 SDDFTVNKERHDKLFPMELRPQAHEIIRTWAFYTILKAHLHQ 562
>UniRef50_A6SKR0 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 494
Score = 33.5 bits (73), Expect = 5.5
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 525 NLSSQQMLSQASPAPMTPLTPLSADPGILPQLQNIVST 638
N S+ +L PAP+ PLT L D GI Q+ ++ T
Sbjct: 3 NFLSRMLLFPPHPAPLVPLTDLQYDTGITSQIDSLKKT 40
>UniRef50_Q1YSS1 Cluster: Putative uncharacterized protein; n=1;
gamma proteobacterium HTCC2207|Rep: Putative
uncharacterized protein - gamma proteobacterium HTCC2207
Length = 313
Score = 33.1 bits (72), Expect = 7.2
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -2
Query: 298 FAGLLQVDAMVYLFQYVIRTWQHMIHFSFFTFFIWKLRVSVLVSVD 161
F GL+ + L QY I WQ M+ F+ F W + V+ V ++
Sbjct: 106 FVGLIAGSVIYLLRQYRIARWQDMLLFAVGVFIAWSVSVAPAVQLE 151
>UniRef50_Q82ZH6 Cluster: Pheromone binding protein; n=1;
Enterococcus faecalis|Rep: Pheromone binding protein -
Enterococcus faecalis (Streptococcus faecalis)
Length = 547
Score = 32.7 bits (71), Expect = 9.5
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 477 AASNSTKYDVSMIAAGNLSSQQMLSQASPAPMTPL-TPLSADPGILPQLQNI 629
AA TK + +GNL+++Q +S +SPAP++ L T + D Q++
Sbjct: 18 AACGGTKEAAEKVDSGNLAAEQKISISSPAPISTLDTTQTTDKNTFTMAQHL 69
>UniRef50_Q92GR9 Cluster: Valyl-tRNA synthetase; n=18;
Rickettsiales|Rep: Valyl-tRNA synthetase - Rickettsia
conorii
Length = 812
Score = 32.7 bits (71), Expect = 9.5
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +2
Query: 320 SNSFNSNSPRHNRHLPLWVRRQL*DLAQSWGLHRGLCTHMHQ 445
S+ F N RH++ P+ +R Q ++ ++W + L H+HQ
Sbjct: 474 SDDFAVNKDRHDKLFPMDLRPQAHEIIRTWAFYTILKAHLHQ 515
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 632,892,973
Number of Sequences: 1657284
Number of extensions: 11645409
Number of successful extensions: 35396
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 33676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35351
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59265488880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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