Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0875
         (731 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0114 - 14911119-14911301,14911458-14911550,14911634-149116...    84   1e-16
12_02_0891 + 24065001-24065101,24065260-24065345,24065902-240659...    73   3e-13
03_05_0548 + 25439649-25439734,25440712-25440799,25441160-254412...    70   2e-12
04_04_1292 - 32413046-32413807,32413901-32413936,32414037-324141...    29   3.8  
01_04_0136 + 16506747-16506982,16507128-16507728,16510443-165108...    28   8.8  

>10_08_0114 -
           14911119-14911301,14911458-14911550,14911634-14911678,
           14911831-14911953,14912090-14912177,14912976-14913118
          Length = 224

 Score = 83.8 bits (198), Expect = 1e-16
 Identities = 40/52 (76%), Positives = 44/52 (84%)
 Frame = +3

Query: 576 PLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIM 731
           P+  +    GI+P LQNIVSTVNLDC+LDLKKIAL ARNAEYNPKRFAAVIM
Sbjct: 33  PVDLVEHPSGIVPTLQNIVSTVNLDCRLDLKKIALQARNAEYNPKRFAAVIM 84


>12_02_0891 +
           24065001-24065101,24065260-24065345,24065902-24065965,
           24066137-24066224,24066810-24066881,24067821-24067871,
           24067940-24067984,24068086-24068178,24068265-24068366,
           24068442-24068515,24068540-24068579
          Length = 271

 Score = 72.5 bits (170), Expect = 3e-13
 Identities = 35/44 (79%), Positives = 37/44 (84%)
 Frame = +3

Query: 600 PGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIM 731
           P  +   +NIVSTVNLDCKLDLK IAL ARNAEYNPKRFAAVIM
Sbjct: 77  PASMCSHKNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIM 120


>03_05_0548 +
           25439649-25439734,25440712-25440799,25441160-25441204,
           25441407-25441478,25442402-25442452,25442527-25442571,
           25442670-25442762,25442848-25442949,25443024-25443097,
           25443130-25443160
          Length = 228

 Score = 69.7 bits (163), Expect = 2e-12
 Identities = 32/36 (88%), Positives = 33/36 (91%)
 Frame = +3

Query: 603 GILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPK 710
           GI+P LQNIVSTVNLDCKLDLK IAL ARNAEYNPK
Sbjct: 23  GIIPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK 58


>04_04_1292 -
           32413046-32413807,32413901-32413936,32414037-32414179,
           32414263-32414419,32414518-32414679,32414860-32415107,
           32415589-32415733
          Length = 550

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = +3

Query: 498 YDVSMIAAGNLSSQQMLSQASPAPMTPLTPLSADPGILPQLQ 623
           Y++S +A       QM++ A P+P TP  P+    GI+PQ Q
Sbjct: 463 YNMSTMAPPPPPPPQMMNIARPSPSTPQPPM----GIMPQTQ 500


>01_04_0136 +
           16506747-16506982,16507128-16507728,16510443-16510842,
           16513595-16513709,16513776-16514352
          Length = 642

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
 Frame = +3

Query: 411 DSTEVYAHICTNSQLCNSATD--DAASNSTKYDVSMIAA-GNLS-SQQMLSQASPAPMTP 578
           + TE+   I  N+      ++    AS S++ D S++    +LS S   + ++SP P TP
Sbjct: 147 EGTEILDRILENTSFVEKYSEPLQKASVSSREDPSLVEPESDLSISVDSIKESSPKPSTP 206

Query: 579 LTPLSADPGILPQLQN 626
            +     PG  P  ++
Sbjct: 207 ESKEIRTPGCAPDFRD 222


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,899,925
Number of Sequences: 37544
Number of extensions: 316416
Number of successful extensions: 928
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)