Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0875
(731 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U35147-1|AAA79092.1| 354|Drosophila melanogaster TATA-box bindi... 109 5e-24
U11718-1|AAA68629.1| 353|Drosophila melanogaster TATA-box bindi... 107 2e-23
M38388-1|AAA28926.1| 353|Drosophila melanogaster TATA-consensus... 107 2e-23
M38082-1|AAA28931.1| 353|Drosophila melanogaster TATA-box bindi... 107 2e-23
AY069663-1|AAL39808.1| 353|Drosophila melanogaster LD44083p pro... 107 2e-23
AE013599-3256|AAF46754.1| 353|Drosophila melanogaster CG9874-PA... 107 2e-23
X70838-1|CAA50186.1| 224|Drosophila melanogaster TBP-related fa... 54 2e-07
X70837-1|CAA50185.1| 224|Drosophila melanogaster TBP-related fa... 54 2e-07
AY128483-1|AAM75076.1| 224|Drosophila melanogaster RE61442p pro... 54 2e-07
AE014134-1392|AAF52600.1| 224|Drosophila melanogaster CG7562-PA... 54 2e-07
AY118689-1|AAM50549.1| 893|Drosophila melanogaster AT15637p pro... 36 0.043
AE013599-3102|AAM68188.1| 889|Drosophila melanogaster CG10543-P... 36 0.043
AE013599-3101|AAO41340.1| 1024|Drosophila melanogaster CG10543-P... 36 0.043
AE013599-3100|AAF46652.3| 1634|Drosophila melanogaster CG10543-P... 36 0.043
BT010315-1|AAQ23633.1| 1559|Drosophila melanogaster AT27514p pro... 30 2.8
AE013599-1903|AAX52705.1| 1560|Drosophila melanogaster CG8787-PB... 30 2.8
AE013599-1902|AAF58239.1| 1669|Drosophila melanogaster CG8787-PA... 30 2.8
AY118644-1|AAM50013.1| 892|Drosophila melanogaster SD03914p pro... 29 4.9
AE014297-3578|ABI31205.1| 1728|Drosophila melanogaster CG34100-P... 29 4.9
AE014297-3577|AAN14004.2| 1918|Drosophila melanogaster CG34100-P... 29 4.9
DQ162845-1|ABA42953.1| 1715|Drosophila melanogaster TRF2 protein. 29 6.5
AY069554-1|AAL39699.1| 632|Drosophila melanogaster LD27895p pro... 29 6.5
AJ238442-1|CAB41475.1| 537|Drosophila melanogaster TBP-like fac... 29 6.5
AF136569-1|AAD28784.1| 632|Drosophila melanogaster TATA box bin... 29 6.5
AE014298-1172|AAF46368.2| 632|Drosophila melanogaster CG18009-P... 29 6.5
AE014298-1171|AAF46369.3| 632|Drosophila melanogaster CG18009-P... 29 6.5
AE014298-2649|AAN09453.1| 357|Drosophila melanogaster CG32494-P... 29 8.6
>U35147-1|AAA79092.1| 354|Drosophila melanogaster TATA-box binding
protein protein.
Length = 354
Score = 109 bits (261), Expect = 5e-24
Identities = 54/71 (76%), Positives = 57/71 (80%)
Frame = +3
Query: 519 AGNLSSQQMLSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAE 698
AG+ S + PMTP TP SADPGI+PQLQNIVSTVNL CKLDLKKIALHARNAE
Sbjct: 147 AGDALSNIHQTMGPSTPMTPATPGSADPGIVPQLQNIVSTVNLCCKLDLKKIALHARNAE 206
Query: 699 YNPKRFAAVIM 731
YNPKRFAAVIM
Sbjct: 207 YNPKRFAAVIM 217
>U11718-1|AAA68629.1| 353|Drosophila melanogaster TATA-box binding
protein protein.
Length = 353
Score = 107 bits (257), Expect = 2e-23
Identities = 51/55 (92%), Positives = 52/55 (94%)
Frame = +3
Query: 567 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIM 731
PMTP TP SADPGI+PQLQNIVSTVNL CKLDLKKIALHARNAEYNPKRFAAVIM
Sbjct: 162 PMTPATPGSADPGIVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIM 216
>M38388-1|AAA28926.1| 353|Drosophila melanogaster
TATA-consensus-binding transcriptionfactor TFII protein.
Length = 353
Score = 107 bits (257), Expect = 2e-23
Identities = 51/55 (92%), Positives = 52/55 (94%)
Frame = +3
Query: 567 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIM 731
PMTP TP SADPGI+PQLQNIVSTVNL CKLDLKKIALHARNAEYNPKRFAAVIM
Sbjct: 162 PMTPATPGSADPGIVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIM 216
>M38082-1|AAA28931.1| 353|Drosophila melanogaster TATA-box binding
protein protein.
Length = 353
Score = 107 bits (257), Expect = 2e-23
Identities = 51/55 (92%), Positives = 52/55 (94%)
Frame = +3
Query: 567 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIM 731
PMTP TP SADPGI+PQLQNIVSTVNL CKLDLKKIALHARNAEYNPKRFAAVIM
Sbjct: 162 PMTPATPGSADPGIVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIM 216
>AY069663-1|AAL39808.1| 353|Drosophila melanogaster LD44083p
protein.
Length = 353
Score = 107 bits (257), Expect = 2e-23
Identities = 51/55 (92%), Positives = 52/55 (94%)
Frame = +3
Query: 567 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIM 731
PMTP TP SADPGI+PQLQNIVSTVNL CKLDLKKIALHARNAEYNPKRFAAVIM
Sbjct: 162 PMTPATPGSADPGIVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIM 216
>AE013599-3256|AAF46754.1| 353|Drosophila melanogaster CG9874-PA
protein.
Length = 353
Score = 107 bits (257), Expect = 2e-23
Identities = 51/55 (92%), Positives = 52/55 (94%)
Frame = +3
Query: 567 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIM 731
PMTP TP SADPGI+PQLQNIVSTVNL CKLDLKKIALHARNAEYNPKRFAAVIM
Sbjct: 162 PMTPATPGSADPGIVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIM 216
>X70838-1|CAA50186.1| 224|Drosophila melanogaster TBP-related
factor protein.
Length = 224
Score = 54.0 bits (124), Expect = 2e-07
Identities = 29/75 (38%), Positives = 44/75 (58%)
Frame = +3
Query: 507 SMIAAGNLSSQQMLSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHA 686
++ A N ++ + P+ + P A I +LQNIV+T +++C+LDLK I
Sbjct: 16 NVAATSNAAANPHAALQPQQPVALVEPKDAQHEI--RLQNIVATFSVNCELDLKAINSRT 73
Query: 687 RNAEYNPKRFAAVIM 731
RN+EY+PKRF VIM
Sbjct: 74 RNSEYSPKRFRGVIM 88
>X70837-1|CAA50185.1| 224|Drosophila melanogaster TBP-related
factor protein.
Length = 224
Score = 54.0 bits (124), Expect = 2e-07
Identities = 29/75 (38%), Positives = 44/75 (58%)
Frame = +3
Query: 507 SMIAAGNLSSQQMLSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHA 686
++ A N ++ + P+ + P A I +LQNIV+T +++C+LDLK I
Sbjct: 16 NVAATSNAAANPHAALQPQQPVALVEPKDAQHEI--RLQNIVATFSVNCELDLKAINSRT 73
Query: 687 RNAEYNPKRFAAVIM 731
RN+EY+PKRF VIM
Sbjct: 74 RNSEYSPKRFRGVIM 88
>AY128483-1|AAM75076.1| 224|Drosophila melanogaster RE61442p
protein.
Length = 224
Score = 54.0 bits (124), Expect = 2e-07
Identities = 29/75 (38%), Positives = 44/75 (58%)
Frame = +3
Query: 507 SMIAAGNLSSQQMLSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHA 686
++ A N ++ + P+ + P A I +LQNIV+T +++C+LDLK I
Sbjct: 16 NVAATSNAAANPHAALQPQQPVALVEPKDAQHEI--RLQNIVATFSVNCELDLKAINSRT 73
Query: 687 RNAEYNPKRFAAVIM 731
RN+EY+PKRF VIM
Sbjct: 74 RNSEYSPKRFRGVIM 88
>AE014134-1392|AAF52600.1| 224|Drosophila melanogaster CG7562-PA
protein.
Length = 224
Score = 54.0 bits (124), Expect = 2e-07
Identities = 29/75 (38%), Positives = 44/75 (58%)
Frame = +3
Query: 507 SMIAAGNLSSQQMLSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHA 686
++ A N ++ + P+ + P A I +LQNIV+T +++C+LDLK I
Sbjct: 16 NVAATSNAAANPHAALQPQQPVALVEPKDAQHEI--RLQNIVATFSVNCELDLKAINSRT 73
Query: 687 RNAEYNPKRFAAVIM 731
RN+EY+PKRF VIM
Sbjct: 74 RNSEYSPKRFRGVIM 88
>AY118689-1|AAM50549.1| 893|Drosophila melanogaster AT15637p
protein.
Length = 893
Score = 36.3 bits (80), Expect = 0.043
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +3
Query: 465 ATDDAASNSTKYDVSMIAAGNLSSQQMLSQASPAPMTPLTPLSADPGILPQ 617
A+ AA++ K + AA SSQQ + S A TP P+S PG L Q
Sbjct: 266 ASKKAATSKAKAQAAAAAAAAASSQQQQQKGSAATPTPPPPVSTTPGCLQQ 316
>AE013599-3102|AAM68188.1| 889|Drosophila melanogaster CG10543-PB,
isoform B protein.
Length = 889
Score = 36.3 bits (80), Expect = 0.043
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +3
Query: 465 ATDDAASNSTKYDVSMIAAGNLSSQQMLSQASPAPMTPLTPLSADPGILPQ 617
A+ AA++ K + AA SSQQ + S A TP P+S PG L Q
Sbjct: 266 ASKKAATSKAKAQAAAAAAAAASSQQQQQKGSAATPTPPPPVSTTPGCLQQ 316
>AE013599-3101|AAO41340.1| 1024|Drosophila melanogaster CG10543-PC,
isoform C protein.
Length = 1024
Score = 36.3 bits (80), Expect = 0.043
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +3
Query: 465 ATDDAASNSTKYDVSMIAAGNLSSQQMLSQASPAPMTPLTPLSADPGILPQ 617
A+ AA++ K + AA SSQQ + S A TP P+S PG L Q
Sbjct: 401 ASKKAATSKAKAQAAAAAAAAASSQQQQQKGSAATPTPPPPVSTTPGCLQQ 451
>AE013599-3100|AAF46652.3| 1634|Drosophila melanogaster CG10543-PA,
isoform A protein.
Length = 1634
Score = 36.3 bits (80), Expect = 0.043
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +3
Query: 465 ATDDAASNSTKYDVSMIAAGNLSSQQMLSQASPAPMTPLTPLSADPGILPQ 617
A+ AA++ K + AA SSQQ + S A TP P+S PG L Q
Sbjct: 1011 ASKKAATSKAKAQAAAAAAAAASSQQQQQKGSAATPTPPPPVSTTPGCLQQ 1061
>BT010315-1|AAQ23633.1| 1559|Drosophila melanogaster AT27514p
protein.
Length = 1559
Score = 30.3 bits (65), Expect = 2.8
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +3
Query: 447 SQLCNSATDDAASNSTKYDVSMIAAGNLSSQQMLSQASPAPMTPLTPLSADPGILPQLQN 626
S C S++ +AS S+ S +G+ ++ S ++ AP PLT +A L +Q
Sbjct: 680 STSCTSSSSSSASMSSSCSSSN--SGSTTTAPTTSSSAGAPTAPLTLAAAAETTLANVQA 737
Query: 627 IVSTV 641
++STV
Sbjct: 738 MLSTV 742
>AE013599-1903|AAX52705.1| 1560|Drosophila melanogaster CG8787-PB,
isoform B protein.
Length = 1560
Score = 30.3 bits (65), Expect = 2.8
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +3
Query: 447 SQLCNSATDDAASNSTKYDVSMIAAGNLSSQQMLSQASPAPMTPLTPLSADPGILPQLQN 626
S C S++ +AS S+ S +G+ ++ S ++ AP PLT +A L +Q
Sbjct: 681 STSCTSSSSSSASMSSSCSSSN--SGSTTTAPTTSSSAGAPTAPLTLAAAAETTLANVQA 738
Query: 627 IVSTV 641
++STV
Sbjct: 739 MLSTV 743
>AE013599-1902|AAF58239.1| 1669|Drosophila melanogaster CG8787-PA,
isoform A protein.
Length = 1669
Score = 30.3 bits (65), Expect = 2.8
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +3
Query: 447 SQLCNSATDDAASNSTKYDVSMIAAGNLSSQQMLSQASPAPMTPLTPLSADPGILPQLQN 626
S C S++ +AS S+ S +G+ ++ S ++ AP PLT +A L +Q
Sbjct: 681 STSCTSSSSSSASMSSSCSSSN--SGSTTTAPTTSSSAGAPTAPLTLAAAAETTLANVQA 738
Query: 627 IVSTV 641
++STV
Sbjct: 739 MLSTV 743
>AY118644-1|AAM50013.1| 892|Drosophila melanogaster SD03914p
protein.
Length = 892
Score = 29.5 bits (63), Expect = 4.9
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +3
Query: 429 AHICTNSQLCNSATDDAASNSTKYDVSMIAAGNLSSQQMLSQASPAPMTPLTPLSA 596
AH+ T+ L +DAAS S + S + SS ++ + A+P TPLTP+S+
Sbjct: 810 AHMKTHLPLGVFRNEDAASKSPSNNNS-----HASSDKLENPATPIEETPLTPMSS 860
>AE014297-3578|ABI31205.1| 1728|Drosophila melanogaster CG34100-PB,
isoform B protein.
Length = 1728
Score = 29.5 bits (63), Expect = 4.9
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +3
Query: 429 AHICTNSQLCNSATDDAASNSTKYDVSMIAAGNLSSQQMLSQASPAPMTPLTPLSA 596
AH+ T+ L +DAAS S + S + SS ++ + A+P TPLTP+S+
Sbjct: 1646 AHMKTHLPLGVFRNEDAASKSPSNNNS-----HASSDKLENPATPIEETPLTPMSS 1696
>AE014297-3577|AAN14004.2| 1918|Drosophila melanogaster CG34100-PA,
isoform A protein.
Length = 1918
Score = 29.5 bits (63), Expect = 4.9
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +3
Query: 429 AHICTNSQLCNSATDDAASNSTKYDVSMIAAGNLSSQQMLSQASPAPMTPLTPLSA 596
AH+ T+ L +DAAS S + S + SS ++ + A+P TPLTP+S+
Sbjct: 1836 AHMKTHLPLGVFRNEDAASKSPSNNNS-----HASSDKLENPATPIEETPLTPMSS 1886
>DQ162845-1|ABA42953.1| 1715|Drosophila melanogaster TRF2 protein.
Length = 1715
Score = 29.1 bits (62), Expect = 6.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 618 LQNIVSTVNLDCKLDLKKIALHARNAEY 701
+ N+V + ++ C L L++IAL N EY
Sbjct: 1287 INNVVCSFSVGCHLKLREIALQGSNVEY 1314
>AY069554-1|AAL39699.1| 632|Drosophila melanogaster LD27895p
protein.
Length = 632
Score = 29.1 bits (62), Expect = 6.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 618 LQNIVSTVNLDCKLDLKKIALHARNAEY 701
+ N+V + ++ C L L++IAL N EY
Sbjct: 204 INNVVCSFSVGCHLKLREIALQGSNVEY 231
>AJ238442-1|CAB41475.1| 537|Drosophila melanogaster TBP-like factor
protein.
Length = 537
Score = 29.1 bits (62), Expect = 6.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 618 LQNIVSTVNLDCKLDLKKIALHARNAEY 701
+ N+V + ++ C L L++IAL N EY
Sbjct: 109 INNVVCSFSVGCHLKLREIALQGSNVEY 136
>AF136569-1|AAD28784.1| 632|Drosophila melanogaster TATA box
binding protein-relatedfactor 2 protein.
Length = 632
Score = 29.1 bits (62), Expect = 6.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 618 LQNIVSTVNLDCKLDLKKIALHARNAEY 701
+ N+V + ++ C L L++IAL N EY
Sbjct: 204 INNVVCSFSVGCHLKLREIALQGSNVEY 231
>AE014298-1172|AAF46368.2| 632|Drosophila melanogaster CG18009-PD,
isoform D protein.
Length = 632
Score = 29.1 bits (62), Expect = 6.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 618 LQNIVSTVNLDCKLDLKKIALHARNAEY 701
+ N+V + ++ C L L++IAL N EY
Sbjct: 204 INNVVCSFSVGCHLKLREIALQGSNVEY 231
>AE014298-1171|AAF46369.3| 632|Drosophila melanogaster CG18009-PA,
isoform A protein.
Length = 632
Score = 29.1 bits (62), Expect = 6.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 618 LQNIVSTVNLDCKLDLKKIALHARNAEY 701
+ N+V + ++ C L L++IAL N EY
Sbjct: 204 INNVVCSFSVGCHLKLREIALQGSNVEY 231
>AE014298-2649|AAN09453.1| 357|Drosophila melanogaster CG32494-PA
protein.
Length = 357
Score = 28.7 bits (61), Expect = 8.6
Identities = 24/63 (38%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +2
Query: 275 INLKKTSKSCLMQCNSNS-FNSNSPRHNRHLPLWVRRQL*DLAQSWGLHRGLCTHMHQQP 451
I L K S S N+N+ N+N+ RH RH RRQ L Q L L H QQ
Sbjct: 189 IQLPKGSSSSSSSSNNNTCHNANNQRHWRHTRQQSRRQQQQLRQLLLLSFEL-QHQQQQQ 247
Query: 452 AMQ 460
Q
Sbjct: 248 QQQ 250
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,957,995
Number of Sequences: 53049
Number of extensions: 568170
Number of successful extensions: 2024
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2024
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3293648160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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