Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0874
         (758 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    24   1.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.0  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          23   2.6  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   3.5  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   4.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   4.6  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   4.6  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    22   4.6  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   6.1  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.1  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   8.1  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = -1

Query: 341 TSQGLLVFEPWIPAEGTITKYPERFLVRFVFDSELLVSFLNLSIFVYK 198
           T + + V +PW      +     RFL++ + D +  +  LN  +FV +
Sbjct: 44  TFRCVFVLDPWFAGSSNVGINKWRFLLQCLEDLDRSLRKLNSRLFVIR 91


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 127 FIILLSHFLFEFKCYYFNYKSCLCLY 204
           FII   HFL     +Y+ +   LC+Y
Sbjct: 89  FIIFTVHFLLCTYYFYYAFIILLCVY 114



 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 636 MFILWKGYVQQGILFICP 583
           +F+L  GY    +LF CP
Sbjct: 71  LFLLCSGYFTVHLLFYCP 88



 Score = 21.8 bits (44), Expect = 6.1
 Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
 Frame = +1

Query: 127 FIILLSHFLFEFKCYYFNYK--SCLCLY 204
           FII   H LF    YYF       LC+Y
Sbjct: 272 FIIFTMHLLFLLCIYYFYCALIILLCIY 299



 Score = 21.4 bits (43), Expect = 8.1
 Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
 Frame = +1

Query: 127 FIILLSHFLFEFKCYYFNYK--SCLCLY 204
           FII   H LF    YYF       LC+Y
Sbjct: 120 FIIFTVHLLFLLCIYYFVVPLFFLLCIY 147


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = +3

Query: 303 WNPGFEYQQSLTGY---VKGFSRRFWQGNTTHRGTEDKPGRV 419
           +N  ++Y Q+ + Y    +GFS +++QG     G  D+   V
Sbjct: 231 FNFNYQYNQAYSNYNNYQEGFSCQYYQGKNCVGGKVDETAGV 272


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -3

Query: 471 PKTLYPKLFLPCPLLEWRRDP 409
           P + YP   + CP ++W   P
Sbjct: 162 PSSSYPANEISCPQVQWSATP 182


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 222 KKRNEQFRIKNESNKEPFWVFGY 290
           +K +  FR+ +E+N   FWV GY
Sbjct: 368 RKGSYIFRLPDENNNGGFWV-GY 389


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 612 HSPSRE*TLAWIGAFARYSETNTGMPW 692
           H    E TL W G + R S+   G+P+
Sbjct: 191 HIEGNEVTLHWHGVWQRGSQYYDGVPF 217


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 612 HSPSRE*TLAWIGAFARYSETNTGMPW 692
           H    E TL W G + R S+   G+P+
Sbjct: 191 HIEGNEVTLHWHGVWQRGSQYYDGVPF 217


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/30 (23%), Positives = 16/30 (53%)
 Frame = +1

Query: 163 KCYYFNYKSCLCLYTKMDKLRNETSSSESK 252
           +C Y  Y+ CL +  K + ++ E   ++ +
Sbjct: 137 RCQYCRYQKCLNMGMKREAVQEERQRTKDR 166


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +1

Query: 91  SMYAR*NHLTRLFIILLSHFLFEFKCYYFNY 183
           S+Y++  H   + I ++  F  E   Y FNY
Sbjct: 50  SIYSKSFHRNEIHIKIVLMFFKEASLYCFNY 80


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -1

Query: 644 PSQCLFSGRAMYSKASFLSALV 579
           P +C+F+G+A +  + F   L+
Sbjct: 746 PQKCIFNGQAYFPGSRFHPFLI 767


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +3

Query: 48  FKSARYEYK*KKIFFNVCPLKSFNSSFYHF 137
           F +  YE   K+  FN C  KSF  +F  F
Sbjct: 92  FFNQGYELS-KQEIFNCCSKKSFRMNFAIF 120


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,434
Number of Sequences: 336
Number of extensions: 4946
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)