Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0874
         (758 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     24   1.8  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   2.4  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   2.4  
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              23   3.1  
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              23   3.1  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              23   4.1  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   4.1  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    21   9.5  
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              21   9.5  

>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = -1

Query: 341 TSQGLLVFEPWIPAEGTITKYPERFLVRFVFDSELLVSFLNLSIFVYK 198
           T + + V +PW      I     RFL++ + D +  +  LN  +FV +
Sbjct: 48  TFRCVFVLDPWFAGSTNIGINKWRFLLQCLEDLDCSLRKLNSRLFVIR 95


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 7/30 (23%), Positives = 16/30 (53%)
 Frame = +1

Query: 163 KCYYFNYKSCLCLYTKMDKLRNETSSSESK 252
           +C Y  Y+ CL +  K + ++ E   ++ +
Sbjct: 161 RCQYCRYQKCLAMGMKREAVQEERQRTKER 190


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 7/30 (23%), Positives = 16/30 (53%)
 Frame = +1

Query: 163 KCYYFNYKSCLCLYTKMDKLRNETSSSESK 252
           +C Y  Y+ CL +  K + ++ E   ++ +
Sbjct: 161 RCQYCRYQKCLAMGMKREAVQEERQRTKER 190


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 170 TISIIKAVCVCI 205
           TI II A+CVC+
Sbjct: 3   TIVIISAICVCV 14


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 170 TISIIKAVCVCI 205
           TI II A+CVC+
Sbjct: 3   TIVIISAICVCV 14


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 170 TISIIKAVCVCI 205
           TI II A+C+C+
Sbjct: 3   TILIISAICICV 14


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +3

Query: 219 VKKRNEQFRIKNESNKEPFWVFGYGSLCWNPGF 317
           +K + ++FR++ ++ K    + G   LCW P F
Sbjct: 442 IKAQVKRFRMETKAAKTLGIIVGGFILCWLPFF 474


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 81  FFIYIHISRF*ILNLHYNLNNFY 13
           FFIY+H S    L+L+  ++ FY
Sbjct: 135 FFIYVHPSATFSLDLNKVVSVFY 157


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 170 TISIIKAVCVCI 205
           T  II A+CVC+
Sbjct: 3   TFVIISAICVCV 14


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,048
Number of Sequences: 438
Number of extensions: 5668
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)