Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0874
         (758 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g31290.1 68417.m04440 ChaC-like family protein contains Pfam ...    82   3e-16
At1g44790.1 68414.m05131 ChaC-like family protein contains Pfam ...    81   6e-16
At5g26220.1 68418.m03121 ChaC-like family protein contains Pfam ...    79   3e-15
At4g31770.1 68417.m04508 calcineurin-like phosphoesterase family...    29   3.4  
At3g21270.1 68416.m02688 Dof-type zinc finger domain-containing ...    29   3.4  
At5g23720.2 68418.m02781 dual specificity protein phosphatase fa...    28   5.9  
At5g23720.1 68418.m02780 dual specificity protein phosphatase fa...    28   5.9  

>At4g31290.1 68417.m04440 ChaC-like family protein contains Pfam
           profile: PF04752 ChaC-like protein
          Length = 227

 Score = 82.2 bits (194), Expect = 3e-16
 Identities = 34/66 (51%), Positives = 42/66 (63%)
 Frame = +3

Query: 276 WVFGYGSLCWNPGFEYQQSLTGYVKGFSRRFWQGNTTHRGTEDKPGRVATLIEDKEGITW 455
           WVFGYGSL WNPGF Y + + G++KG+ R F      HRGT + P R  TL + +E I W
Sbjct: 4   WVFGYGSLVWNPGFHYDEKVLGFIKGYKRVFDLACIDHRGTPEHPARTCTLEKAEEAICW 63

Query: 456 GKAFLV 473
           G AF V
Sbjct: 64  GTAFCV 69



 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
 Frame = +1

Query: 508 QRECKLGGYKTCVVNF-HPTPFLPATRADKKDALLYIALPE---NKHWLGSAPLPDIAKQ 675
           +REC+    KT V  +    P  PA        +++ + P+   NK++LG APL D+A+Q
Sbjct: 85  RRECEYD-LKTSVDFYKEDDPLKPAVTG----VIVFTSTPDKVSNKYYLGPAPLEDMARQ 139

Query: 676 ILECRGPSGSNVEYLLRLADFMRE 747
           I    GP G+N +YL  L   M +
Sbjct: 140 IATANGPCGNNRDYLFLLEKAMHD 163


>At1g44790.1 68414.m05131 ChaC-like family protein contains Pfam
           profile: PF04752 ChaC-like protein
          Length = 199

 Score = 81.4 bits (192), Expect = 6e-16
 Identities = 35/69 (50%), Positives = 44/69 (63%)
 Frame = +3

Query: 276 WVFGYGSLCWNPGFEYQQSLTGYVKGFSRRFWQGNTTHRGTEDKPGRVATLIEDKEGITW 455
           WVFGYGSL W  GF + +SL G++KG+ R F QG+T HRGT D PGR  TL    E +  
Sbjct: 4   WVFGYGSLIWKTGFPFDESLPGFIKGYRRVFHQGSTDHRGTPDFPGRTVTLEAAHEEVCC 63

Query: 456 GKAFLVAAE 482
           G A+ +  E
Sbjct: 64  GVAYKITKE 72



 Score = 51.6 bits (118), Expect = 5e-07
 Identities = 24/51 (47%), Positives = 36/51 (70%), Gaps = 3/51 (5%)
 Frame = +1

Query: 604 LLYIALPE---NKHWLGSAPLPDIAKQILECRGPSGSNVEYLLRLADFMRE 747
           ++YIA P+   N ++LG APL DIAKQI++ +GPSG N +YL  L + + +
Sbjct: 112 MVYIASPDKKSNNNYLGPAPLEDIAKQIVKAKGPSGPNRDYLFNLEEALAQ 162


>At5g26220.1 68418.m03121 ChaC-like family protein contains Pfam
           profile: PF04752 ChaC-like protein
          Length = 216

 Score = 79.0 bits (186), Expect = 3e-15
 Identities = 37/97 (38%), Positives = 51/97 (52%)
 Frame = +3

Query: 276 WVFGYGSLCWNPGFEYQQSLTGYVKGFSRRFWQGNTTHRGTEDKPGRVATLIEDKEGITW 455
           WVFGYGSL WNPGF++ + L GY+K + R F      HRGT + P R  TL +    I W
Sbjct: 4   WVFGYGSLIWNPGFDFDEKLIGYIKDYKRVFDLACIDHRGTPEHPARTCTLEQSTGAICW 63

Query: 456 GKAFLVAAENSVHCLISPKRMQIRWLQDLRCELPSNT 566
           G A+ V            +++ + +L+   CE  S T
Sbjct: 64  GAAYCVRGGP------EKEKLAMEYLERRECEYDSKT 94



 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 19/38 (50%), Positives = 26/38 (68%)
 Frame = +1

Query: 628 NKHWLGSAPLPDIAKQILECRGPSGSNVEYLLRLADFM 741
           NK++LG APL ++A+QI    GP G+N EYL +L   M
Sbjct: 124 NKYYLGPAPLEEMARQIATASGPCGNNREYLFKLEKAM 161


>At4g31770.1 68417.m04508 calcineurin-like phosphoesterase family
           protein contains Pfam profile: PF00149 calcineurin-like
           phosphoesterase
          Length = 418

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
 Frame = -3

Query: 498 GSVRCFLRPPKTLYPKLFLPCPLLEWRRDPAYLLFHDEWCSLAR--ISLRNLLHNQSRIA 325
           GSV  FL   K L  K FL    +E    P  +L+ +EW ++ R   S+  L    + ++
Sbjct: 241 GSVTKFLALDKCLPGKKFLQIIEIESEPGPFEVLYDEEWLAITRKFNSIFPLTRRYTNVS 300

Query: 324 GIRTLDSSR 298
              T+  SR
Sbjct: 301 TAGTIQESR 309


>At3g21270.1 68416.m02688 Dof-type zinc finger domain-containing
           protein (ADOF2) identical to Dof zinc finger protein
           ADOF2 GI:3608263 from [Arabidopsis thaliana]; identical
           to cDNA adof2 mRNA for Dof zinc finger protein
           GI:3608262; contains Pfam profile PF02701: Dof domain,
           zinc finger
          Length = 204

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 23/67 (34%), Positives = 26/67 (38%), Gaps = 11/67 (16%)
 Frame = +1

Query: 166 CYYFNY---------KSCLCLYTKMDKLRNETSSSESKTNLTR--NLSGYLVMVPSAGIQ 312
           CYY NY         KSC   +TK   LRN      S+ N T+    S      PS   Q
Sbjct: 42  CYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGGSRKNATKRSTSSSSSASSPSNSSQ 101

Query: 313 GSNTSNP 333
              T NP
Sbjct: 102 NKKTKNP 108


>At5g23720.2 68418.m02781 dual specificity protein phosphatase
           family protein contains Pfam profile: PF00782 dual
           specificity phosphatase, catalytic domain; contains TG
           acceptor splice site at intron 9
          Length = 845

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -3

Query: 444 LPCPLLEWRRDPAYLLFHDEWCSLAR 367
           LPC  L WR +PA LL  D   S A+
Sbjct: 227 LPCRQLRWRGNPANLLLTDRIVSSAK 252


>At5g23720.1 68418.m02780 dual specificity protein phosphatase
           family protein contains Pfam profile: PF00782 dual
           specificity phosphatase, catalytic domain; contains TG
           acceptor splice site at intron 9
          Length = 929

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -3

Query: 444 LPCPLLEWRRDPAYLLFHDEWCSLAR 367
           LPC  L WR +PA LL  D   S A+
Sbjct: 311 LPCRQLRWRGNPANLLLTDRIVSSAK 336


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,447,563
Number of Sequences: 28952
Number of extensions: 404513
Number of successful extensions: 1056
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1056
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1692519896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)