Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0873
         (722 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    29   0.050
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    24   1.4  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    24   1.4  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    24   1.4  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    24   1.4  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    24   1.4  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    23   2.5  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    23   2.5  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   4.4  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   5.8  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           22   5.8  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 28.7 bits (61), Expect = 0.050
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +3

Query: 399 GFILLSTQNGQQAFDEGYVSRLLGGLQT 482
           GF+L+ T NG+  F    V  LLG LQT
Sbjct: 114 GFLLILTPNGKIVFVSHTVEHLLGHLQT 141


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = +1

Query: 445 RATFHDFWEAFRRDLLPWTPIEHTQTRPGSIDTIRTC 555
           R  FH  W      L+PW  +E    +   + TI  C
Sbjct: 212 RGLFHRGWSMSGTMLVPWALMEQPLAQTKKLATIVGC 248



 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 621 RTYRLDGFPWADP 583
           R YR +G P+A P
Sbjct: 38  RVYRFEGIPYAQP 50


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = +1

Query: 445 RATFHDFWEAFRRDLLPWTPIEHTQTRPGSIDTIRTC 555
           R  FH  W      L+PW  +E    +   + TI  C
Sbjct: 212 RGLFHRGWSMSGTMLVPWALMEQPLAQTKKLATIVGC 248



 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 621 RTYRLDGFPWADP 583
           R YR +G P+A P
Sbjct: 38  RVYRFEGIPYAQP 50


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = +1

Query: 445 RATFHDFWEAFRRDLLPWTPIEHTQTRPGSIDTIRTC 555
           R  FH  W      L+PW  +E    +   + TI  C
Sbjct: 212 RGLFHRGWSMSGTMLVPWALMEQPLAQTKKLATIVGC 248



 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 621 RTYRLDGFPWADP 583
           R YR +G P+A P
Sbjct: 38  RVYRFEGIPYAQP 50


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = +1

Query: 445 RATFHDFWEAFRRDLLPWTPIEHTQTRPGSIDTIRTC 555
           R  FH  W      L+PW  +E    +   + TI  C
Sbjct: 212 RGLFHRGWSMSGTMLVPWALMEQPLAQTKKLATIVGC 248



 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 621 RTYRLDGFPWADP 583
           R YR +G P+A P
Sbjct: 38  RVYRFEGIPYAQP 50


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = +1

Query: 445 RATFHDFWEAFRRDLLPWTPIEHTQTRPGSIDTIRTC 555
           R  FH  W      L+PW  +E    +   + TI  C
Sbjct: 212 RGLFHRGWSMSGTMLVPWALMEQPLAQTKKLATIVGC 248



 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 621 RTYRLDGFPWADP 583
           R YR +G P+A P
Sbjct: 38  RVYRFEGIPYAQP 50


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 531 VHRYHPNMHFVFYEDMIKDLPKEIRRVCKF 620
           +H+Y P  H V   D++K LP    R   F
Sbjct: 104 MHKYQPRFHLVRANDILK-LPYSTFRTYVF 132


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 531 VHRYHPNMHFVFYEDMIKDLPKEIRRVCKF 620
           +H+Y P  H V   D++K LP    R   F
Sbjct: 95  MHKYQPRFHLVRANDILK-LPYSTFRTYVF 123


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 178 PDTGNSVRVHKSEFHEFGQLPRAYGRARYPSW 273
           P++  S RV +    E G++ RAY R  + SW
Sbjct: 292 PESNPSERVMR----ELGRIFRAYCRENHASW 319


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +1

Query: 220 HEFGQLPRAYGRARYPSWKMIEEM 291
           H+  +L +A+ R +YP     EE+
Sbjct: 230 HQLDELEKAFERTQYPDIYTREEL 253


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 107 NNLNYNAARERPLYE 151
           NN  Y++ +E P+YE
Sbjct: 42  NNEMYHSVKEEPIYE 56


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,662
Number of Sequences: 336
Number of extensions: 4181
Number of successful extensions: 33
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)