Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0873
(722 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_04_0176 - 14536305-14537315 48 8e-06
04_03_0563 - 17195605-17196681 45 7e-05
12_01_0976 - 9821481-9821973,9822417-9822940 43 3e-04
08_02_1243 - 25527523-25527960,25527993-25528604 40 0.003
11_01_0249 - 1913739-1914755 39 0.003
11_04_0414 + 17386806-17387936 38 0.006
08_02_1246 - 25559601-25560026,25560031-25560576 38 0.006
08_02_0082 + 12059692-12060209,12060484-12060973 38 0.006
07_03_1201 + 24791588-24792619 38 0.008
11_04_0409 + 17345182-17345669,17346262-17346760 38 0.011
08_02_1245 - 25557201-25558199 38 0.011
12_01_0248 - 1841454-1841820,1842223-1842728 37 0.014
09_02_0094 + 4196729-4197571 37 0.014
12_01_0245 - 1829982-1830995 37 0.019
10_02_0152 - 5902554-5903058,5904171-5904670 36 0.025
02_05_0329 - 27986261-27987372,27988632-27988638,27988999-279891... 36 0.025
11_01_0248 - 1910312-1910730,1910805-1911336 36 0.043
11_01_0247 - 1892248-1892602,1892835-1893112,1893371-1893392,189... 36 0.043
09_06_0229 + 21709510-21709532,21710021-21710041,21712386-21713577 35 0.075
04_04_0569 + 26293891-26294931 35 0.075
01_03_0018 - 11686420-11687460 34 0.099
12_01_0247 - 1836971-1837810 34 0.13
06_03_0815 - 24905641-24905874,24905974-24906044,24906678-249068... 33 0.17
12_01_0244 - 1821413-1822144 33 0.23
11_06_0143 + 20589574-20589684,20590256-20590873,20590943-205910... 31 0.93
06_01_1016 + 7944817-7945266,7945461-7945922 29 2.8
08_01_1054 - 10719787-10719842,10719865-10720402 29 3.7
07_01_0845 + 6866211-6867143 29 3.7
02_04_0281 + 21563588-21563696,21565053-21565708,21565793-215658... 29 3.7
10_01_0232 + 2456449-2456652,2456814-2456897,2459113-2459201,245... 29 4.9
05_03_0251 + 10987441-10988961,10989731-10989823,10989937-10990053 29 4.9
03_06_0231 + 32522898-32523524 29 4.9
05_02_0119 + 6793292-6793613,6795793-6795952,6796416-6796458,679... 28 8.6
02_04_0403 - 22622014-22622075,22622159-22622350,22624834-226249... 28 8.6
>11_04_0176 - 14536305-14537315
Length = 336
Score = 48.0 bits (109), Expect = 8e-06
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Frame = +1
Query: 262 YPSWKMIEEMPSPRFIKTHXXXXXXXXXXXET---AKVVYVARDPRDVVVSYYYLHKMVS 432
YP ++ E +PSPR + TH E ++VY+ RDP+D +VS ++ +K
Sbjct: 104 YPKLELYESLPSPRLLSTHLPYSMLPHRIREQETGCRLVYIYRDPKDAMVSMWHQNKKEK 163
Query: 433 KHLMRATFHDFWEAF 477
K+ R TF + ++ F
Sbjct: 164 KN--RLTFEEMFDMF 176
Score = 36.7 bits (81), Expect = 0.019
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +2
Query: 2 ADAIYNMKVRPDDIWVITFPRSGTTWTQELIWLVENNLNYNAARE-RPLYERFP 160
A A + + RP DI + +FP+ GTTW + L + N Y + E PL E P
Sbjct: 41 AAAETSFQPRPSDILLSSFPKCGTTWLKALAFATLNRSTYPPSDEHHPLLEHNP 94
>04_03_0563 - 17195605-17196681
Length = 358
Score = 44.8 bits (101), Expect = 7e-05
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Frame = +1
Query: 277 MIEEMPSPRFIKTHXXXXXXXXXXXETA----KVVYVARDPRDVVVS-YYYLHKMVSKHL 441
++E +PSPR + H + K+VYV RDP+DV+VS ++Y K+ +
Sbjct: 147 VVEALPSPRIMAVHMPFSTLPASVVVDSSSGCKIVYVWRDPKDVLVSLWHYYRKLRPEEA 206
Query: 442 MRATFHDFWEAF 477
+ FHD +E+F
Sbjct: 207 HVSEFHDLYESF 218
Score = 35.9 bits (79), Expect = 0.033
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 29 RPDDIWVITFPRSGTTWTQELIWLVENNLNYNAARERPLYERFP 160
RP D+ + ++P+SGTTW + L++ + + Y R+ PL P
Sbjct: 87 RPSDVLLASYPKSGTTWMKALVFAIMSRKVY-PLRDHPLLRLNP 129
>12_01_0976 - 9821481-9821973,9822417-9822940
Length = 338
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Frame = +1
Query: 280 IEEMPSPRFIKTHXXXXXXXXXXXET--AKVVYVARDPRDVVVSYYYLHKMVSKHLMRAT 453
I+E+PSPR + TH + KVVY+ R+P+D++VS ++ +++ L +
Sbjct: 140 IDELPSPRLMSTHMQHAALPKSIADEPGCKVVYICREPKDILVSAWHFFRIIEPDL---S 196
Query: 454 FHDFWEA 474
F + +EA
Sbjct: 197 FQEVFEA 203
>08_02_1243 - 25527523-25527960,25527993-25528604
Length = 349
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Frame = +1
Query: 280 IEEMPSPRFIKTHXXXXXXXXXXXETA-KVVYVARDPRDVVVS-YYYLHK 423
++ +PSPR + TH E ++VY+ R+P+DVVVS ++Y++K
Sbjct: 155 LDALPSPRLLSTHMPPQLLPRRVAELGCRIVYLCREPKDVVVSLWHYMNK 204
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/33 (33%), Positives = 23/33 (69%)
Frame = +3
Query: 558 FVFYEDMIKDLPKEIRRVCKFLQRYYTDDQVKA 656
F+ Y+DM+ D ++++ +FL+ +TD++V A
Sbjct: 242 FLKYDDMMADPAGHVKKLAEFLRAPFTDEEVGA 274
>11_01_0249 - 1913739-1914755
Length = 338
Score = 39.1 bits (87), Expect = 0.003
Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 9/146 (6%)
Frame = +2
Query: 17 NMKVRPDDIWVITFPRSGTTWTQELIWLVENNLNYNAARERPLYERFPMLET----TSQI 184
++ R DI+++TFP+SGTTW + L+ + + A P ++ P LET +I
Sbjct: 69 HLTARTTDIFMVTFPKSGTTWLKALLHSALHRRADDLAAHSP-HQLVPFLETQVFIKDRI 127
Query: 185 PEIAYEFIKANFMNLGSFQGLTEGPGTLAGR**RRCL-PRDS*RHTCHYPFCRRPCW--- 352
P+++ M Q L + + + C P+D H+ RP W
Sbjct: 128 PDLSSLPAPRLLMTHIPSQSLPDSVADSSCKVVYLCRDPKDCFISLWHFLNRFRP-WDIN 186
Query: 353 -RRQRSCTWPGIQGMLWFHIIIYTKW 427
+ C + G W H++ Y +W
Sbjct: 187 EAHRNFCDGVSLFGPYWEHVLGYWRW 212
>11_04_0414 + 17386806-17387936
Length = 376
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 29 RPDDIWVITFPRSGTTWTQELIWLVENNLNYNAARE-RPLYERFP 160
RP D+++ +FP+SGTTW + L + N Y + + PL R P
Sbjct: 62 RPSDVFLASFPKSGTTWLKALAFATINRTTYPPSGDAHPLRHRGP 106
>08_02_1246 - 25559601-25560026,25560031-25560576
Length = 323
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/53 (32%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Frame = +1
Query: 280 IEEMPSPRFIKTHXXXXXXXXXXXETA-KVVYVARDPRDVVVS-YYYLHKMVS 432
++ +PSPR + TH E ++VY+ R+P+DVVVS +++++K ++
Sbjct: 133 LDALPSPRLLSTHLPHQLLPPRVAELGCRIVYLCREPKDVVVSTWHFMNKAMA 185
Score = 35.1 bits (77), Expect = 0.057
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +2
Query: 29 RPDDIWVITFPRSGTTWTQELIWLVENNLNY--NAARERPLYERFP 160
RPDD+ + T+P+ GTTW + L + + N + A + PL P
Sbjct: 68 RPDDVLLATYPKCGTTWLKALSFDIANRSRHPVAGAGDHPLLTTHP 113
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/31 (32%), Positives = 22/31 (70%)
Frame = +3
Query: 558 FVFYEDMIKDLPKEIRRVCKFLQRYYTDDQV 650
F+ Y+DM+ D ++++ +FL+ +TD++V
Sbjct: 216 FLKYDDMMADPAGHVKKLAEFLRVPFTDEEV 246
>08_02_0082 + 12059692-12060209,12060484-12060973
Length = 335
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/67 (34%), Positives = 34/67 (50%)
Frame = +1
Query: 277 MIEEMPSPRFIKTHXXXXXXXXXXXETAKVVYVARDPRDVVVSYYYLHKMVSKHLMRATF 456
+++ +PSPR + TH T K+VY+ RD +D VS + H M +H TF
Sbjct: 142 LLDMLPSPRLLSTH---MPLSLLPPSTCKIVYIYRDQKDTAVSLW--HFMKRRH-PDLTF 195
Query: 457 HDFWEAF 477
+ EAF
Sbjct: 196 SEVHEAF 202
>07_03_1201 + 24791588-24792619
Length = 343
Score = 37.9 bits (84), Expect = 0.008
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +1
Query: 280 IEEMPSPRFIKTHXXXXXXXXXXXET-----AKVVYVARDPRDVVVSYYYLHKMVSKHLM 444
++ +PSPR I TH KVVY+ RDP+D+VVS Y+ + + L
Sbjct: 137 LDMLPSPRLINTHTPYQLLPESVVAGDGGGGCKVVYICRDPKDMVVSLYHFMRRLQPDLS 196
Query: 445 RA 450
A
Sbjct: 197 LA 198
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 29 RPDDIWVITFPRSGTTWTQELIWLVENNLNYNAARERPLYERFP 160
R DD+ + ++P+ GTTW + L + Y A E PL P
Sbjct: 76 RADDVVLASYPKCGTTWLKALAFAAMTRAAY-PADEHPLLRLNP 118
>11_04_0409 + 17345182-17345669,17346262-17346760
Length = 328
Score = 37.5 bits (83), Expect = 0.011
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 29 RPDDIWVITFPRSGTTWTQELIWLVENNLNYNAARE-RPLYERFP 160
RP D+ + +FP+SGTTW + L + N Y + E PL R P
Sbjct: 65 RPSDVLLASFPKSGTTWLKALAFATLNRAAYPPSGEGHPLRRRGP 109
Score = 36.7 bits (81), Expect = 0.019
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +1
Query: 277 MIEEMPSPRFIKTHXXXXXXXXXXXETA---KVVYVARDPRDVVVSYYYLHK 423
M +PSPR + TH + ++VY+ RDP+DV+VS++ K
Sbjct: 126 MFASLPSPRLLSTHLPYSLLPEGVKADSSGCRIVYICRDPKDVLVSWWLFTK 177
>08_02_1245 - 25557201-25558199
Length = 332
Score = 37.5 bits (83), Expect = 0.011
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +1
Query: 262 YPSWKMIEEMPSPRFIKTHXXXXXXXXXXXETAKVVYVARDPRDVVVS-YYYLHKMVSKH 438
+P ++ +PSPR + TH ++VY+ R+P+DVV+S +++++K++
Sbjct: 125 HPLAAALDAIPSPRLLGTHMPHHLLPPRIG--CRIVYLCREPKDVVISTWHFMNKVIEG- 181
Query: 439 LMRATFHDFWEAFRRDLLPWTPI 507
F +E F P+ PI
Sbjct: 182 -FSIDFDKAFELFVDGCSPFGPI 203
Score = 32.7 bits (71), Expect = 0.30
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +2
Query: 29 RPDDIWVITFPRSGTTWTQELIWLVENNLNYN--AARERPLYERFP 160
R DD+ + T+P+ GTTW + L + + N + +A PL + P
Sbjct: 65 RDDDVLLATYPKCGTTWLKALSFAIANRHRHPVVSAGHHPLLTQSP 110
Score = 31.1 bits (67), Expect = 0.93
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +3
Query: 558 FVFYEDMIKDLPKEIRRVCKFLQRYYTDDQVKA 656
F+ Y+DM+ D ++++ +FL+ +TDD+V A
Sbjct: 223 FLKYDDMMADPAGHVKKLAEFLRVPFTDDEVDA 255
>12_01_0248 - 1841454-1841820,1842223-1842728
Length = 290
Score = 37.1 bits (82), Expect = 0.014
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +2
Query: 17 NMKVRPDDIWVITFPRSGTTWTQELIWLVENNLNYNAARERPLYERFPMLET 172
++ R DI+++TFP+SGTTW + L+ + + A P ++ P LET
Sbjct: 69 HLTARTTDIFMVTFPKSGTTWLKTLLHSALHRGANDLAAHSP-HQLVPFLET 119
>09_02_0094 + 4196729-4197571
Length = 280
Score = 37.1 bits (82), Expect = 0.014
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +2
Query: 17 NMKVRPDDIWVITFPRSGTTWTQELIWLVENNLNYNA--ARERPLYERFP 160
N K R DD+ ++T P+S TTW + L + + N ++ + A PL + P
Sbjct: 11 NFKPRHDDVILVTHPKSSTTWLKALAFAIVNRSSFESIDASHHPLLTQNP 60
Score = 31.1 bits (67), Expect = 0.93
Identities = 12/53 (22%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 280 IEEMPSPRFIKTHXXXXXXXXXXXETA-KVVYVARDPRDVVVSYYYLHKMVSK 435
+E +PSPR + TH ++Y+ R+P+D +S ++ +++
Sbjct: 77 LETLPSPRLLTTHLPLSLLPSTVTTMGCHIIYLCREPKDAFISRWHFDNKIAQ 129
>12_01_0245 - 1829982-1830995
Length = 337
Score = 36.7 bits (81), Expect = 0.019
Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 9/146 (6%)
Frame = +2
Query: 17 NMKVRPDDIWVITFPRSGTTWTQELIWLVENNLNYNAARERPLYERFPMLET----TSQI 184
++ R DI++ TFP+SGTTW + L++ + P ++ P LE+ +I
Sbjct: 68 HLTARATDIFLTTFPKSGTTWLKVLLYSTLHRGTDELVAHSP-HQLVPFLESQVFVNDRI 126
Query: 185 PEIAYEFIKANFMNLGSFQGLTEGPGTLAGR**RRCL-PRDS*RHTCHYPFCRRPCW--- 352
P+++ FM Q L T + C P+D H+ + R W
Sbjct: 127 PDLSSLSSPRLFMTHIPSQSLPNSVATSGCKVVYLCRDPKDCFVSLWHF-WNRFMPWDID 185
Query: 353 -RRQRSCTWPGIQGMLWFHIIIYTKW 427
++ C G W HI+ Y +W
Sbjct: 186 EAHRQFCDGVSQFGPFWEHILGYWRW 211
>10_02_0152 - 5902554-5903058,5904171-5904670
Length = 334
Score = 36.3 bits (80), Expect = 0.025
Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Frame = +1
Query: 280 IEEMPSPRFIKTHXXXXXXXXXXXETA--KVVYVARDPRDVVVSYYYLHKMVSKHLMRAT 453
++ PSPR + TH +++ K++YV R P+D+++S+++ + ++
Sbjct: 132 LDATPSPRLLSTHLPYSVLPASITDSSRCKIIYVCRQPKDMLISFWHFINRDKSRDVSSS 191
Query: 454 FHDFWEAFRRDLLPWTPI 507
+ WE+ R +PI
Sbjct: 192 Y--VWESVRECTYFGSPI 207
>02_05_0329 -
27986261-27987372,27988632-27988638,27988999-27989128,
27989157-27989216,27989318-27989970,27990056-27990526
Length = 810
Score = 36.3 bits (80), Expect = 0.025
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +1
Query: 280 IEEMPSPRFIKTHXXXXXXXXXXXETA-KVVYVARDPRDVVVSY-YYLHKMVSKHLMRAT 453
++ MPSPR + H + +VVY+ RDP+D VS +YL ++ +
Sbjct: 601 LDAMPSPRILAVHEPLSSLPASVKASGCRVVYLCRDPKDAFVSLRHYLDEIKPEGSTMTP 660
Query: 454 FHDFWEAFRRDLLPWTPI 507
F + +E + P+ P+
Sbjct: 661 FDEAFELLCDGVSPYGPM 678
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 29 RPDDIWVITFPRSGTTWTQELIW-LVENNLNYNAARERPLYERFP 160
RP D+ + T P+SG+TW + L + +V + AA + PL P
Sbjct: 532 RPSDVILATMPKSGSTWLKALAFCVVHRGRHAPAAGQHPLLHSSP 576
>11_01_0248 - 1910312-1910730,1910805-1911336
Length = 316
Score = 35.5 bits (78), Expect = 0.043
Identities = 12/27 (44%), Positives = 21/27 (77%)
Frame = +2
Query: 17 NMKVRPDDIWVITFPRSGTTWTQELIW 97
++ R DI+++TFP+SGTTW + L++
Sbjct: 68 HLTARATDIFLVTFPKSGTTWIKALLY 94
>11_01_0247 -
1892248-1892602,1892835-1893112,1893371-1893392,
1894613-1895268
Length = 436
Score = 35.5 bits (78), Expect = 0.043
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +2
Query: 17 NMKVRPDDIWVITFPRSGTTWTQELIWLVEN 109
++ R D+++ TFP+SGTTW + LI++ N
Sbjct: 294 HLMARTTDVFIATFPKSGTTWLKALIFVSWN 324
Score = 31.5 bits (68), Expect = 0.70
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +2
Query: 17 NMKVRPDDIWVITFPRSGTTWTQELIW 97
++ R DI++ TFP+S TTW + L++
Sbjct: 69 HLTARATDIFLTTFPKSSTTWLKALLY 95
Score = 31.5 bits (68), Expect = 0.70
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +1
Query: 280 IEEMPSPRFIKTHXXXXXXXXXXXETA-KVVYVARDPRDVVVSYYY 414
+ +PSPR TH + VVY+ RDP+D VS ++
Sbjct: 130 LSSLPSPRLFMTHIPSQSLPDSVAASGCNVVYLCRDPKDCFVSLWH 175
>09_06_0229 + 21709510-21709532,21710021-21710041,21712386-21713577
Length = 411
Score = 34.7 bits (76), Expect = 0.075
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +1
Query: 292 PSPRFIKTHXXXXXXXXXXX--ETAKVVYVARDPRDVVVSYYYL-HKMVSKHLMRATFHD 462
P PR + TH + +++Y+ RDP+D +VS+++ KM + + A
Sbjct: 186 PPPRVLATHLPYSLLPKRITAGDGCRIIYICRDPKDTLVSFWHFSKKMAATMAVDAGAFT 245
Query: 463 FWEAF 477
F EAF
Sbjct: 246 FDEAF 250
Score = 31.5 bits (68), Expect = 0.70
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 32 PDDIWVITFPRSGTTWTQELIWLVENNLNYNAA-RERPLYERFP 160
PD + + +FP+SGT+W + L + N + + + PL R P
Sbjct: 112 PDGVLLASFPKSGTSWLKALAFAAANRAAHPPSDADHPLRRRNP 155
>04_04_0569 + 26293891-26294931
Length = 346
Score = 34.7 bits (76), Expect = 0.075
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +2
Query: 29 RPDDIWVITFPRSGTTWTQELIWLVENNLNY--NAARERP 142
RP DI V T P+SGTTW + L++ + + +AA + P
Sbjct: 73 RPSDIIVATLPKSGTTWIKALLYATVHRREHPADAAADHP 112
Score = 31.1 bits (67), Expect = 0.93
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +1
Query: 289 MPSPRFIKTHXXXXXXXXXXXETA-KVVYVARDPRDVVVSYY 411
+P PR TH + KVVYV RDP+D ++S +
Sbjct: 141 LPDPRLFATHVPFTSLPSAAAASGCKVVYVCRDPKDNLISMW 182
>01_03_0018 - 11686420-11687460
Length = 346
Score = 34.3 bits (75), Expect = 0.099
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 241 RAYGRARYPSWKMIEEMPSPRFIKTHXXXXXXXXXXXETA-KVVYVARDPRDVVVSYYY 414
+ Y R R P + +P+PR + TH + KVVY+ RDP+D +VS ++
Sbjct: 129 QVYVRDRAPD---LSSLPAPRLLATHIPRPSLPASVAISGCKVVYMCRDPKDCLVSLWH 184
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 29 RPDDIWVITFPRSGTTWTQELIW 97
R DI + TFP+ GTTW + L++
Sbjct: 70 RDTDIIIATFPKCGTTWLKALLF 92
>12_01_0247 - 1836971-1837810
Length = 279
Score = 33.9 bits (74), Expect = 0.13
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +2
Query: 17 NMKVRPDDIWVITFPRSGTTWTQEL 91
++ R DI+++TFP+SGTTW + L
Sbjct: 6 HLTARATDIFLVTFPKSGTTWIKAL 30
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +1
Query: 280 IEEMPSPRFIKTHXXXXXXXXXXXETA-KVVYVARDPRDVVVSYYY 414
+ +P P + TH + KVVY+ RDP+D VS ++
Sbjct: 67 LSSLPEPWLLMTHIPSQSLPDSVAASGCKVVYLCRDPKDCFVSLWH 112
>06_03_0815 -
24905641-24905874,24905974-24906044,24906678-24906847,
24906862-24906955,24907904-24907948,24908599-24909631
Length = 548
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +2
Query: 29 RPDDIWVITFPRSGTTWTQELIWLVENNLNY--NAARERP 142
RP DI V T P+SGTTW + L++ + + +AA + P
Sbjct: 77 RPSDIVVPTLPKSGTTWIKALLYATVHRREHPADAAGDHP 116
Score = 31.5 bits (68), Expect = 0.70
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Frame = +1
Query: 280 IEEMPSPRFIKTHXXXXXXXXXXXETA-----KVVYVARDPRDVVVS 405
++ +P PR TH A KVVYV RDP+D +VS
Sbjct: 142 LDALPDPRLFATHAPFDLLPRAVVAAAPPSGCKVVYVCRDPKDTLVS 188
>12_01_0244 - 1821413-1822144
Length = 243
Score = 33.1 bits (72), Expect = 0.23
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 280 IEEMPSPRFIKTHXXXXXXXXXXXET-AKVVYVARDPRDVVVSYYY 414
+ +P PR + TH + +KVVY+ RDP+D VS ++
Sbjct: 35 LSSLPEPRLLTTHIPAQSLPDSIAASGSKVVYLCRDPKDCFVSLWH 80
>11_06_0143 +
20589574-20589684,20590256-20590873,20590943-20591010,
20591159-20591234,20591311-20591372,20591452-20591603,
20591889-20592052,20592129-20592317,20592417-20592538,
20592620-20592827,20593238-20593291,20593457-20593626,
20594265-20594355,20595405-20595529,20596372-20596444,
20596822-20596914,20597482-20597728,20598305-20598364,
20598461-20598590,20599008-20599014
Length = 939
Score = 31.1 bits (67), Expect = 0.93
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +3
Query: 270 LEDDRGDAFPEIHKDTPATIPSAADPAGDGKGRVRGQGSKG 392
L+DD D D A PS A +G G+GR RG+G +G
Sbjct: 142 LDDDNEDKM-----DEDAKTPSKASGSGRGRGRGRGRGGRG 177
>06_01_1016 + 7944817-7945266,7945461-7945922
Length = 303
Score = 29.5 bits (63), Expect = 2.8
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 29 RPDDIWVITFPRSGTTW 79
RPDD+ V + P+ GTTW
Sbjct: 86 RPDDVIVASLPKCGTTW 102
>08_01_1054 - 10719787-10719842,10719865-10720402
Length = 197
Score = 29.1 bits (62), Expect = 3.7
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 29 RPDDIWVITFPRSGTTWTQEL 91
RP D+ + T P++GTTW + L
Sbjct: 88 RPGDVVLATLPKAGTTWLKAL 108
>07_01_0845 + 6866211-6867143
Length = 310
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/54 (35%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Frame = +3
Query: 231 AASKGLRKGPVP*LEDDRGDAFPEIHKDTPATIPSAADPAGDGKG-RVRGQGSK 389
A S GP P D F +DT T P GDG G V G+G K
Sbjct: 192 AESAAAHAGPEPESADQTAVDFSVSGEDTVTTGPELEQLVGDGNGATVEGEGQK 245
>02_04_0281 +
21563588-21563696,21565053-21565708,21565793-21565879,
21566487-21567461,21567640-21567786
Length = 657
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 621 LQRYYTDDQVKALSEHLSFESLR-KNKNVNNTTGE 722
LQ Y D ++ A +H FESLR K+ N +++T E
Sbjct: 390 LQSAYVDKKLNARDKHRFFESLRIKSSNGSSSTAE 424
>10_01_0232 +
2456449-2456652,2456814-2456897,2459113-2459201,
2459245-2459452,2459764-2459883,2460004-2460087,
2460171-2460242,2460342-2460455,2460852-2460952,
2461024-2461117,2461265-2461432,2461539-2461616,
2461908-2461973,2462052-2462108,2462353-2462572,
2462867-2463003,2465379-2465450,2465530-2465577,
2465681-2465806,2465982-2466047,2466508-2466620,
2467348-2467432,2467885-2467980,2468067-2468114,
2468190-2468258,2468393-2468581
Length = 935
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +2
Query: 14 YNMKVRPDDIWVITFPRSGTTWTQELIWLVENNLNYNAA 130
YN+K R +D ++ T T ++W + ++ NY A
Sbjct: 271 YNLKERVNDFVAAALKQANVTRTNHIMWTMGDDFNYQYA 309
>05_03_0251 + 10987441-10988961,10989731-10989823,10989937-10990053
Length = 576
Score = 28.7 bits (61), Expect = 4.9
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = -3
Query: 357 RLQQGRRQKG*WQVCLYESRGRHLLYHLPARVPGPSVSPWKLPKF 223
R Q+G++ G C R H+ YHLP RV S P LP+F
Sbjct: 11 RRQRGKKGGGGGGDC--GGRHFHVHYHLPRRVCASSFVPNLLPRF 53
>03_06_0231 + 32522898-32523524
Length = 208
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 421 CVDNNMKPQHPLDPWPRTRPLPSP 350
CVD ++ QHP P RT PLPSP
Sbjct: 169 CVDPWLR-QHPTCPVCRTSPLPSP 191
>05_02_0119 +
6793292-6793613,6795793-6795952,6796416-6796458,
6797015-6797335
Length = 281
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 270 LEDDRGDAFPEIHKDTPATIPSAADPAGDGKGR 368
++D R A +H PA +P DP GDG G+
Sbjct: 95 IDDSRRGAGGGLHY-APAGVPEQQDPTGDGGGQ 126
>02_04_0403 -
22622014-22622075,22622159-22622350,22624834-22624910,
22625026-22625039
Length = 114
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Frame = +3
Query: 309 KDTP---ATIPSAADPAGDGKGRVRGQG 383
+DTP A P+A P G G+GR RG+G
Sbjct: 82 EDTPRVKAKKPTAGKPLGRGRGRGRGRG 109
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,663,683
Number of Sequences: 37544
Number of extensions: 474666
Number of successful extensions: 1732
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1715
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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