Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0873
         (722 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         27   0.78 
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         27   0.78 
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   9.6  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    23   9.6  

>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 26.6 bits (56), Expect = 0.78
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = +3

Query: 291 AFPEIHKDT---PATIPSAADPAGDGKGRVRGQGSKGCCG 401
           ++P++H++    P  +P   D   +  G   G GS GCCG
Sbjct: 325 SYPKLHEEIINRPPQVPGERDRIANEGGT--GCGSHGCCG 362


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 26.6 bits (56), Expect = 0.78
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = +3

Query: 291 AFPEIHKDT---PATIPSAADPAGDGKGRVRGQGSKGCCG 401
           ++P++H++    P  +P   D   +  G   G GS GCCG
Sbjct: 325 SYPKLHEEIINRPPQVPGERDRIANEGGT--GCGSHGCCG 362


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
 Frame = +3

Query: 330 PSAADPAG---DGKGRVRGQGSKGCCGFILLSTQNGQQAFD 443
           P  A PAG    G+GR    G KG  G+       G   FD
Sbjct: 394 PGIAGPAGAPGGGEGRPGAPGPKGPRGYEGPQGPKGMDGFD 434


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 465 EVVKRSPHQMLADH 424
           + VK+ PH+ LADH
Sbjct: 334 DAVKQDPHKGLADH 347


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 786,638
Number of Sequences: 2352
Number of extensions: 17108
Number of successful extensions: 29
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)