Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0871
         (767 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B56C9 Cluster: PREDICTED: similar to GA15266-PA...    35   2.6  
UniRef50_Q6K7L4 Cluster: Putative uncharacterized protein P0533E...    33   7.8  

>UniRef50_UPI00015B56C9 Cluster: PREDICTED: similar to GA15266-PA;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           GA15266-PA - Nasonia vitripennis
          Length = 627

 Score = 34.7 bits (76), Expect = 2.6
 Identities = 21/61 (34%), Positives = 24/61 (39%)
 Frame = +3

Query: 9   PGHMTTRHAEAPRLSPAAGGMVGLAPVPQPSSNEMLVQERGRPPGLEGEYVANRPVRHSR 188
           PG  T  H   P  SP+ G   G  P   PSS+       G PP   G Y    P  +S 
Sbjct: 116 PGSSTGGHGNPPPYSPSGGYSHGAPPAYNPSSSG---GYHGGPPSYSGGYHGGAPPAYSS 172

Query: 189 G 191
           G
Sbjct: 173 G 173


>UniRef50_Q6K7L4 Cluster: Putative uncharacterized protein
           P0533E11.22; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           P0533E11.22 - Oryza sativa subsp. japonica (Rice)
          Length = 120

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = +3

Query: 3   RVPGHMTTRHAEAPRLSPAAGGMVGL--APVPQPSSNEMLVQERGRPPGLEGE 155
           R+P   ++R A AP   P  GG  G   AP P P +  +L++E  +  G  GE
Sbjct: 6   RLPRRSSSRSAAAPPCLPRRGGTPGTPRAPPPPPLAPSLLLRELKKLAGSHGE 58


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 730,152,248
Number of Sequences: 1657284
Number of extensions: 14738498
Number of successful extensions: 35747
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 34407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35734
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64204279620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)