Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0870
         (685 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0520 - 3900387-3900613,3900812-3900853,3902092-3902210,390...    29   2.6  
05_07_0352 - 29475855-29476330,29476421-29477165,29477689-294780...    29   3.4  
10_08_1063 - 22628642-22628716,22628806-22629012,22629325-226294...    29   4.5  
03_06_0114 + 31751471-31751785,31751919-31752056,31752183-317522...    29   4.5  
05_01_0228 + 1692117-1692924,1693321-1693431,1693536-1693675,169...    28   7.9  

>03_01_0520 -
           3900387-3900613,3900812-3900853,3902092-3902210,
           3903633-3903712,3903829-3903856,3904151-3904272,
           3904714-3904857,3904897-3906327
          Length = 730

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 13/55 (23%), Positives = 25/55 (45%)
 Frame = +1

Query: 103 NVNPEPQIEIPHNLPPQMINEFMTQEKERHRLRIQHLVEKDKLVLAVEQEIFECT 267
           N+NPE  +++P      +I  +  +    H   +    + DK +   E+E  +CT
Sbjct: 307 NINPEVVVDVPTGTGLSLIGGYFEEVSVAHERGLSWAGDFDKHMFVTEREPTQCT 361


>05_07_0352 -
           29475855-29476330,29476421-29477165,29477689-29478081,
           29478167-29478473,29478694-29479019
          Length = 748

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = +3

Query: 432 VDDKWEKIKEGMLRRQHTEAQTLHAVKPWVGSGN*RSWA 548
           VDD  E+++E  +   + EAQ  H V P +G G  RS A
Sbjct: 269 VDD--EEVQETPMEEMNDEAQECHEVSPSIGIGKRRSRA 305


>10_08_1063 -
           22628642-22628716,22628806-22629012,22629325-22629433,
           22629547-22629657,22630466-22630513,22630636-22630713,
           22632151-22632254,22632360-22632470,22632555-22632791
          Length = 359

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 16/78 (20%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
 Frame = +1

Query: 7   HHRQRGLFPVKPKPPKDFNKYLMNRCTYTLQRNVNPEPQIEIPHNLPP-QMINEFMTQEK 183
           HHR++   P+ P   K     L+N   Y    N      + +P   P   ++++ +  + 
Sbjct: 121 HHREKLNLPINPYTVKSLLWQLLNGLNYLHSENTGLHNIVHLPQKSPAFDLLSKMLEYDP 180

Query: 184 ERHRLRIQHLVEKDKLVL 237
            +     Q L  + +LV+
Sbjct: 181 RKRITAAQALEHEIRLVI 198


>03_06_0114 +
           31751471-31751785,31751919-31752056,31752183-31752291,
           31756033-31756598
          Length = 375

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = +3

Query: 318 TILRDREVYNVLAPEQEEKRN-AQRSRCNGRQINSW 422
           T L+ RE+Y V+  ++ EK   AQ +  + +QIN+W
Sbjct: 278 TRLKMREIYGVVYEQEMEKMTLAQTTGLDQKQINNW 313


>05_01_0228 +
           1692117-1692924,1693321-1693431,1693536-1693675,
           1693865-1694075,1694148-1694415,1694543-1694696,
           1694795-1695123,1695748-1695835
          Length = 702

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = -3

Query: 485 GVLTSKHSLFNFFPFVIHLLKPRVNLPSVAT*ALRISFLFLLW 357
           G LT K  ++++   V+ ++  R +L SVA+ A   S + L+W
Sbjct: 524 GQLTEKADIYSYGVLVLEIITGRKSLNSVASSAEGHSLMSLIW 566


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,438,709
Number of Sequences: 37544
Number of extensions: 432731
Number of successful extensions: 1062
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1062
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)