Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0870
         (685 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g32330.1 68414.m03983 heat shock transcription factor family ...    31   0.71 
At2g13290.2 68415.m01465 glycosyl transferase family 17 protein ...    28   5.0  
At2g13290.1 68415.m01464 glycosyl transferase family 17 protein ...    28   5.0  
At2g27210.1 68415.m03270 kelch repeat-containing serine/threonin...    27   8.8  
At1g09870.1 68414.m01111 histidine acid phosphatase family prote...    27   8.8  
At1g08420.1 68414.m00931 kelch repeat-containing protein / serin...    27   8.8  

>At1g32330.1 68414.m03983 heat shock transcription factor family
           protein contains Pfam profile: PF00447 HSF-type
           DNA-binding domain
          Length = 485

 Score = 31.1 bits (67), Expect = 0.71
 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
 Frame = +3

Query: 405 RQINSW-LQEVD-DKWEKIKEGMLRRQHTEAQTLHAVKPWVGSG 530
           RQ+N++  ++VD D+WE   EG LR Q    Q++   KP  G G
Sbjct: 91  RQLNTYGFRKVDPDRWEFANEGFLRGQKHLLQSITRRKPAHGQG 134


>At2g13290.2 68415.m01465 glycosyl transferase family 17 protein low
           similarity to beta-1,4-mannosyl-glycoprotein
           beta-1,4-N-acetylglucosaminyltransferase (EC 2.4.1.144)
           from Mus musculus [SP|Q10470], Rattus norvegicus
           [SP|Q02527], Homo sapiens [SP|Q09327] ; contains Pfam
           profile PF04724 :Glycosyltransferase family 17
          Length = 361

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +2

Query: 509 QTMGWEWKLKELGLCDFKTIPKIDTTHVPQIHGIKF 616
           Q +   W L+E G+ D   +   D   +P  H +KF
Sbjct: 168 QRVAMNWLLREAGVSDGDAVIMSDADEIPSPHTVKF 203


>At2g13290.1 68415.m01464 glycosyl transferase family 17 protein low
           similarity to beta-1,4-mannosyl-glycoprotein
           beta-1,4-N-acetylglucosaminyltransferase (EC 2.4.1.144)
           from Mus musculus [SP|Q10470], Rattus norvegicus
           [SP|Q02527], Homo sapiens [SP|Q09327] ; contains Pfam
           profile PF04724 :Glycosyltransferase family 17
          Length = 361

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +2

Query: 509 QTMGWEWKLKELGLCDFKTIPKIDTTHVPQIHGIKF 616
           Q +   W L+E G+ D   +   D   +P  H +KF
Sbjct: 168 QRVAMNWLLREAGVSDGDAVIMSDADEIPSPHTVKF 203


>At2g27210.1 68415.m03270 kelch repeat-containing serine/threonine
           phosphoesterase family protein similar to SP|P48482
           Serine/threonine protein phosphatase PP1 isozyme 2 (EC
           3.1.3.16) {Arabidopsis thaliana}; contains Pfam profile
           PF00149: Calcineurin-like phosphoesterase
          Length = 1006

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -3

Query: 380 ISFLFLLWS*HVVNFSVTKNRTNREGQGLISYG 282
           I  + LLWS    N SV   R N  G GL+++G
Sbjct: 855 IVLMDLLWSDPTENDSVEGLRPNARGPGLVTFG 887


>At1g09870.1 68414.m01111 histidine acid phosphatase family protein
           contains Pfam profile PF00328: Histidine acid
           phosphatase; similar to multiple inositol polyphosphate
           phosphatase (GI:4105496)[Mus musculus]; EST gb|R64758
           comes from this gene
          Length = 487

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +3

Query: 327 RDREVYNVLAPEQEEKRNAQRSRCNGRQINSWLQEVDDKWE-KIKEGMLRRQ 479
           R RE+ ++    +E  R+A+  +    +I  WL +    WE K+K G L RQ
Sbjct: 75  RLRELESLAGRFKELVRDAEARKLPSDKIPGWLGQWKSPWEGKVKGGELIRQ 126


>At1g08420.1 68414.m00931 kelch repeat-containing protein /
           serine/threonine phosphoesterase family protein contains
           Pfam profiles: PF00149 calcineurin-like phosphoesterase,
           PF01344 kelch motif
          Length = 1018

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -3

Query: 380 ISFLFLLWS*HVVNFSVTKNRTNREGQGLISYG 282
           I  + LLWS    N SV   R N  G GL+++G
Sbjct: 866 IVLMDLLWSDPTENDSVEGLRPNARGPGLVTFG 898


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,719,300
Number of Sequences: 28952
Number of extensions: 350870
Number of successful extensions: 871
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1447936096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)