Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0869
         (699 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              23   3.7  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    22   6.4  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    22   6.4  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    22   6.4  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    22   6.4  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    22   6.4  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    22   6.4  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    22   6.4  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    22   6.4  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    22   6.4  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    21   8.5  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    21   8.5  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    21   8.5  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    21   8.5  

>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 276 NIPCVIVLSFKVCIVIILRYF 338
           N  C + LSFK+C++  +R +
Sbjct: 129 NDECDVALSFKLCMLKAMRNY 149


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -2

Query: 326 NNDYTYFKAQNNYTRN 279
           NN+Y Y    NNY  N
Sbjct: 91  NNNYKYNYNNNNYNNN 106


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -2

Query: 326 NNDYTYFKAQNNYTRN 279
           NN+Y Y    NNY  N
Sbjct: 91  NNNYKYNYNNNNYNNN 106


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -2

Query: 326 NNDYTYFKAQNNYTRN 279
           NN+Y Y    NNY  N
Sbjct: 93  NNNYKYNYNNNNYNNN 108


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -2

Query: 326 NNDYTYFKAQNNYTRN 279
           NN+Y Y    NNY  N
Sbjct: 93  NNNYKYNYNNNNYNNN 108


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -2

Query: 326 NNDYTYFKAQNNYTRN 279
           NN+Y Y    NNY  N
Sbjct: 93  NNNYKYNYNNNNYNNN 108


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -2

Query: 326 NNDYTYFKAQNNYTRN 279
           NN+Y Y    NNY  N
Sbjct: 93  NNNYKYNYNNNNYNNN 108


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -2

Query: 326 NNDYTYFKAQNNYTRNVIFFKTI 258
           +N+Y Y    NNY    +++  I
Sbjct: 306 SNNYNYKNYNNNYNSKKLYYNII 328


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -2

Query: 326 NNDYTYFKAQNNYTRNVIFFKTI 258
           +N+Y Y    NNY    +++  I
Sbjct: 317 SNNYNYKNYNNNYNSKKLYYNII 339


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -2

Query: 326 NNDYTYFKAQNNYTRN 279
           NN+Y Y    NNY  N
Sbjct: 326 NNNYKYNYNNNNYNNN 341


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -2

Query: 326 NNDYTYFKAQNNYTRNVIF 270
           NN+Y Y    NNY + + +
Sbjct: 92  NNNYKYNYNNNNYNKKLYY 110


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -2

Query: 326 NNDYTYFKAQNNYTRNVIF 270
           NN+Y Y    NNY + + +
Sbjct: 92  NNNYKYNYNNNNYNKKLYY 110


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -2

Query: 326 NNDYTYFKAQNNYTRNVIF 270
           NN+Y Y    NNY + + +
Sbjct: 92  NNNYKYNYNNNNYNKKLYY 110


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -2

Query: 326 NNDYTYFKAQNNYTRNVIF 270
           NN+Y Y    NNY + + +
Sbjct: 92  NNNYKYNYNNNNYNKKLYY 110


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,084
Number of Sequences: 438
Number of extensions: 5084
Number of successful extensions: 19
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)