Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0866
         (755 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF100659-8|AAC68966.1|  688|Caenorhabditis elegans Hypothetical ...    30   2.0  
Z35640-1|CAA84705.1|  307|Caenorhabditis elegans Hypothetical pr...    28   8.2  

>AF100659-8|AAC68966.1|  688|Caenorhabditis elegans Hypothetical
           protein F58E2.3 protein.
          Length = 688

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
 Frame = +2

Query: 326 MEYHMKTFYTSATSHYIRSSQL-----FHSPLCAAPALFLLS 436
           +EYH K  +TS TSH I   QL     F S +C +  +FL S
Sbjct: 43  LEYHQKGGHTSITSHEIYEKQLVRDSEFMSVVCKSLKVFLKS 84


>Z35640-1|CAA84705.1|  307|Caenorhabditis elegans Hypothetical
           protein F43D9.2 protein.
          Length = 307

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = -3

Query: 225 ARDAVHYRLVHLPIIHDVHVNFSPHVSSNREPVHHEGLLILVRSHEFENV 76
           A +A H   + L ++H +  +   HV S  E    E   ++++++E ENV
Sbjct: 251 ASEADHVESIFLTLLHKLQQSKPMHVQSQDERHQKEQERLILKANETENV 300


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,867,533
Number of Sequences: 27780
Number of extensions: 323722
Number of successful extensions: 922
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)