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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0864
         (765 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23139-3|AAK31486.2|  275|Caenorhabditis elegans Hypothetical pr...    42   5e-04
AC024200-14|AAF36005.1|  557|Caenorhabditis elegans Hypothetical...    29   3.6  
Z77663-18|CAC70092.2|  191|Caenorhabditis elegans Hypothetical p...    29   4.8  
Z77654-6|CAB01128.3|  191|Caenorhabditis elegans Hypothetical pr...    29   4.8  
U80952-4|AAB38095.1|  662|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z34533-7|CAA84301.2|  369|Caenorhabditis elegans Hypothetical pr...    28   8.4  
U39849-6|AAM81124.1|  642|Caenorhabditis elegans Hypothetical pr...    28   8.4  
U39849-5|AAA81048.2|  663|Caenorhabditis elegans Hypothetical pr...    28   8.4  
AY158691-1|AAN41643.1|  369|Caenorhabditis elegans choline kinas...    28   8.4  

>U23139-3|AAK31486.2|  275|Caenorhabditis elegans Hypothetical
           protein F13H8.4 protein.
          Length = 275

 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
 Frame = +1

Query: 232 VRRSIPLS-LIWIEALQMIFIVGSAXXXXXXXXXXXXXXXXXXXXRQKVYRAWRARVGGR 408
           VRRS+ ++   W++ +Q+ FIV +                     R+ +Y+   AR GG+
Sbjct: 13  VRRSLKINDWPWLDKVQVFFIVIAVLMGLFSLFFLCIGFTATGGTRETMYKDDEARCGGK 72

Query: 409 ISCAVFMIITYILTFVWIVLLGFL 480
            +C + M+I + L   W+ ++  +
Sbjct: 73  FACVIAMLIDFFLIIAWLFIISIV 96



 Score = 37.1 bits (82), Expect = 0.014
 Identities = 22/90 (24%), Positives = 42/90 (46%)
 Frame = +3

Query: 492 IFVHNIWKLCSKPENIVSSTCIDFTQFDFMFPSTVKQEDMKICEPHKIKLFCKDYVEKAE 671
           IF +   +LC          CID   F +   S+    ++++C    ++ FC      A 
Sbjct: 101 IFYYFFDRLCMNLPGYTDGDCIDLHVF-WPLVSSFANSNLRMCGGD-VQQFCA-LTSTAF 157

Query: 672 FMFILAMVSCILVILSLVHYLMCLSANYAH 761
             +++  V C+L+IL ++ +    ++NYAH
Sbjct: 158 SWYVIGWVGCVLIILGVLLFFGIHASNYAH 187


>AC024200-14|AAF36005.1|  557|Caenorhabditis elegans Hypothetical
           protein Y71F9AL.4 protein.
          Length = 557

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 9/67 (13%)
 Frame = +3

Query: 420 RFYDHNIYFDL-CLDSVA-RISSNNNIFVH-NIWKLCSKPENIV------SSTCIDFTQF 572
           +F D N Y ++ C D     ++ + N ++H N  K+C+KPE  V       +TC  F Q 
Sbjct: 196 KFKDLNRYPNIQCWDRGRFTLAGDENFYIHANFVKICTKPERFVCTQGPMENTCTHFWQM 255

Query: 573 DFMFPST 593
                ST
Sbjct: 256 ALSLGST 262


>Z77663-18|CAC70092.2|  191|Caenorhabditis elegans Hypothetical
           protein C50B8.5 protein.
          Length = 191

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 10/30 (33%), Positives = 21/30 (70%)
 Frame = +3

Query: 666 AEFMFILAMVSCILVILSLVHYLMCLSANY 755
           +E++++L ++  +L++L LV YL+    NY
Sbjct: 69  SEWLYLLVLMLIVLILLGLVGYLLYYIVNY 98


>Z77654-6|CAB01128.3|  191|Caenorhabditis elegans Hypothetical
           protein C50B8.5 protein.
          Length = 191

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 10/30 (33%), Positives = 21/30 (70%)
 Frame = +3

Query: 666 AEFMFILAMVSCILVILSLVHYLMCLSANY 755
           +E++++L ++  +L++L LV YL+    NY
Sbjct: 69  SEWLYLLVLMLIVLILLGLVGYLLYYIVNY 98


>U80952-4|AAB38095.1|  662|Caenorhabditis elegans Hypothetical
           protein F54H5.5 protein.
          Length = 662

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 12/18 (66%), Positives = 15/18 (83%)
 Frame = +1

Query: 475 FLVITTFLFTISGNYVQN 528
           +L IT F FTISG+YV+N
Sbjct: 326 YLNITDFSFTISGSYVRN 343


>Z34533-7|CAA84301.2|  369|Caenorhabditis elegans Hypothetical
           protein B0285.9 protein.
          Length = 369

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +3

Query: 540 VSSTCIDFTQFDFMFPSTVKQEDMKICEPHKIKLFCKDYVE 662
           +S T ID+      FP  +K     I  P  I++FC+ YVE
Sbjct: 251 LSETAIDYR---VPFPPGIKMNGDLIDNPPNIQIFCEAYVE 288


>U39849-6|AAM81124.1|  642|Caenorhabditis elegans Hypothetical
           protein C06A8.1b protein.
          Length = 642

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
 Frame = +3

Query: 456 LDSVARISSNNNIFVHNIWKLCSKPEN---IVSSTCIDFTQFDF 578
           L+ V R+S   ++FV   W + S P N   + SS+ I  +  D+
Sbjct: 69  LERVERLSEGGSVFVDMTWHMGSDPANVDKVTSSSSIAASMLDY 112


>U39849-5|AAA81048.2|  663|Caenorhabditis elegans Hypothetical
           protein C06A8.1a protein.
          Length = 663

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
 Frame = +3

Query: 456 LDSVARISSNNNIFVHNIWKLCSKPEN---IVSSTCIDFTQFDF 578
           L+ V R+S   ++FV   W + S P N   + SS+ I  +  D+
Sbjct: 90  LERVERLSEGGSVFVDMTWHMGSDPANVDKVTSSSSIAASMLDY 133


>AY158691-1|AAN41643.1|  369|Caenorhabditis elegans choline kinase
           CKB-2 protein.
          Length = 369

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +3

Query: 540 VSSTCIDFTQFDFMFPSTVKQEDMKICEPHKIKLFCKDYVE 662
           +S T ID+      FP  +K     I  P  I++FC+ YVE
Sbjct: 251 LSETAIDYR---VPFPPGIKMNGDLIDNPPNIQIFCEAYVE 288


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,711,563
Number of Sequences: 27780
Number of extensions: 431255
Number of successful extensions: 1144
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1144
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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