BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0864 (765 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At3g57410.1 68416.m06391 villin 3 (VLN3) nearly identical to vil... 29 3.4 At1g09930.1 68414.m01117 oligopeptide transporter OPT family pro... 29 3.4 At5g48110.1 68418.m05943 terpene synthase/cyclase family protein 29 4.5 At1g10950.1 68414.m01257 endomembrane protein 70, putative 29 4.5 At4g17700.1 68417.m02644 hypothetical protein contains Pfam prof... 28 7.8 At3g01670.1 68416.m00098 expressed protein 28 7.8 At1g54115.1 68414.m06169 cation exchanger, putative 28 7.8 >At3g57410.1 68416.m06391 villin 3 (VLN3) nearly identical to villin 3 (VLN3) [Arabidopsis thaliana] GI:3415117 Length = 965 Score = 29.1 bits (62), Expect = 3.4 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = +1 Query: 496 LFTISGNYVQNQKILYHQLV*ISLNSTSCFL 588 L +SG V N K L + V SLNS CFL Sbjct: 522 LIQVSGTGVHNNKALQVEAVATSLNSYDCFL 552 >At1g09930.1 68414.m01117 oligopeptide transporter OPT family protein similar to SP|P40900 Sexual differentiation process protein isp4 {Schizosaccharomyces pombe}; contains Pfam profile PF03169: OPT oligopeptide transporter protein Length = 734 Score = 29.1 bits (62), Expect = 3.4 Identities = 10/39 (25%), Positives = 21/39 (53%) Frame = +1 Query: 373 VYRAWRARVGGRISCAVFMIITYILTFVWIVLLGFLVIT 489 ++RA + R+S F +I ++ +F W + +L +T Sbjct: 194 LFRALHEKDNARMSRGKFFVIAFVCSFAWYIFPAYLFLT 232 >At5g48110.1 68418.m05943 terpene synthase/cyclase family protein Length = 575 Score = 28.7 bits (61), Expect = 4.5 Identities = 11/38 (28%), Positives = 19/38 (50%) Frame = +3 Query: 321 IYVTLSRLFDYRCNSPESLSGVESSGRWENIVCRFYDH 434 ++ + L+D C PE+++ E+ RWE DH Sbjct: 327 LWTIIDDLYDAYCTLPEAIAFTENMERWETDAIDMPDH 364 >At1g10950.1 68414.m01257 endomembrane protein 70, putative Length = 589 Score = 28.7 bits (61), Expect = 4.5 Identities = 12/24 (50%), Positives = 17/24 (70%), Gaps = 1/24 (4%) Frame = +2 Query: 158 TIMCCLGVGVFCGTM-YRGSALSI 226 T+M CLG+G+ CG + Y GS L + Sbjct: 556 TMMFCLGLGILCGAVGYLGSNLFV 579 >At4g17700.1 68417.m02644 hypothetical protein contains Pfam profile PF04776: Protein of unknown function (DUF626) Length = 254 Score = 27.9 bits (59), Expect = 7.8 Identities = 13/40 (32%), Positives = 24/40 (60%) Frame = -2 Query: 479 RNPSNTIQTKVKIYVMIIKTAHDILPPTRALHAR*TFWRV 360 R+P N +K+ I ++ I+T ++ PP+ L AR F+ + Sbjct: 168 RSPKNPNLSKLVIVMVAIETKDNMEPPSERLKARNAFFYI 207 >At3g01670.1 68416.m00098 expressed protein Length = 822 Score = 27.9 bits (59), Expect = 7.8 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Frame = +3 Query: 237 TKYSTFIDLD*SPADDIHCGKCMHGSTRIYVTLSRL-FDYRCNSPESLSGVESSGRWE 407 T + TF DL + +I C KC+HG + S L D R + S+ + S RW+ Sbjct: 195 TSFETFADLIDQISCEIDC-KCLHGGESHGMMTSGLHLDSRNTTTFSVLSLVSKYRWD 251 >At1g54115.1 68414.m06169 cation exchanger, putative Length = 644 Score = 27.9 bits (59), Expect = 7.8 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +1 Query: 412 SCAVFMIITYILTFVWIVLLGFLVITT 492 SC F I+ YIL VW+V L +L+ T Sbjct: 128 SCRDFKILGYILLGVWLVALFYLLGNT 154 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,267,775 Number of Sequences: 28952 Number of extensions: 382927 Number of successful extensions: 932 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 910 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 932 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1712086600 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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