Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0858
         (749 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0433 - 22891261-22891509,22892181-22892301,22892405-228924...    76   3e-14
04_04_0211 - 23636377-23636532,23636624-23636805,23637853-236379...    73   2e-13
01_01_0984 + 7779251-7779329,7779354-7780054                           30   2.3  
08_02_1540 + 27694565-27694579,27696364-27696447,27696599-276967...    28   9.1  
02_03_0307 + 17546263-17546299,17546522-17548018,17548859-175489...    28   9.1  

>02_04_0433 -
           22891261-22891509,22892181-22892301,22892405-22892496,
           22892692-22892755,22892855-22892920,22893102-22893193,
           22893991-22894050,22894181-22894270,22894484-22894613,
           22895066-22895157,22895299-22895373,22895663-22895754,
           22896496-22896586,22897541-22897574,22897745-22897791,
           22899110-22899209,22899300-22899436,22900837-22901015,
           22901146-22901188,22901264-22901297,22901839-22901948,
           22902043-22902224,22903062-22903168,22903266-22903480
          Length = 833

 Score = 76.2 bits (179), Expect = 3e-14
 Identities = 36/65 (55%), Positives = 46/65 (70%)
 Frame = +2

Query: 509 LAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHF 688
           LAGR+ GKRVV +  L SGLLL+TGPF  N  P+RR+ Q YVI TST++ +   K+ K F
Sbjct: 84  LAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPIRRVNQAYVIATSTKVDISGVKVDK-F 142

Query: 689 NDDYF 703
           +D YF
Sbjct: 143 DDKYF 147


>04_04_0211 -
           23636377-23636532,23636624-23636805,23637853-23637959,
           23637997-23638280
          Length = 242

 Score = 72.9 bits (171), Expect = 2e-13
 Identities = 36/65 (55%), Positives = 44/65 (67%)
 Frame = +2

Query: 509 LAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHF 688
           LAGR  GKRVV +  L SGLLLVTGPF  N  P+RR+ Q YVI TST++ +    + K F
Sbjct: 107 LAGRFMGKRVVFLKQLKSGLLLVTGPFKINGVPIRRVNQPYVIATSTKVDISGVNVEK-F 165

Query: 689 NDDYF 703
           +D YF
Sbjct: 166 DDKYF 170


>01_01_0984 + 7779251-7779329,7779354-7780054
          Length = 259

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = +2

Query: 407 PHSGENPCLI-WWPSIQQACTQDPTQPEDRNCLHSLAGRH 523
           P SG  PC   WW ++ ++ +   TQ E   CL   + RH
Sbjct: 57  PRSGVTPCSGGWWGTLCKSSSAPDTQLEKLKCLVERSARH 96


>08_02_1540 +
           27694565-27694579,27696364-27696447,27696599-27696731,
           27696840-27696951,27697530-27697629,27697810-27697937,
           27698046-27698115,27698548-27698636,27698719-27698764,
           27698854-27698924,27699002-27699075,27699341-27699433,
           27699539-27699572,27699704-27699789,27702147-27702223,
           27702445-27702533,27702630-27702813,27703068-27703249,
           27703962-27704064,27704159-27704490,27704577-27705018,
           27705749-27705846,27706988-27707081,27707666-27707787,
           27708025-27708078,27708185-27708304,27708595-27708799,
           27708889-27709059,27709155-27709310,27709375-27709431,
           27709474-27709580,27709708-27709798,27709931-27710072,
           27710149-27710305,27710400-27710516,27710596-27710722,
           27710844-27711066,27711460-27711466,27711656-27711788
          Length = 1574

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = +2

Query: 347 WR*EEWGNQNSTPQT*EV--LLPHSGENPCLIWWP 445
           W+  E   Q+++P   ++  L  H+G+  C++WWP
Sbjct: 86  WKIPELHGQSNSPPLEQLFTLDEHTGKIRCVLWWP 120


>02_03_0307 +
           17546263-17546299,17546522-17548018,17548859-17548949,
           17549054-17549621,17550591-17550670,17550993-17551077,
           17551172-17551263,17551355-17551423,17551587-17551655,
           17552217-17552510,17552761-17552797,17552883-17552972,
           17553520-17553585,17553704-17553818,17553902-17553940,
           17554519-17554700
          Length = 1136

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +3

Query: 618 FLSAM*SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSN 740
           FL+ +   PP + H     C N S++I   R +   N QSN
Sbjct: 545 FLNLVAKFPPTKRHINAEACSNLSLLIDDMRRKLNLNEQSN 585


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,233,278
Number of Sequences: 37544
Number of extensions: 439791
Number of successful extensions: 974
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 974
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)