Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0858
(749 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein TAXRE... 85 3e-16
BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6 pr... 85 3e-16
BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6 pr... 85 3e-16
BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6 pr... 85 3e-16
BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6 pr... 85 3e-16
BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6 pr... 85 3e-16
BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6 pr... 85 3e-16
BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6 pr... 85 3e-16
BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6 pr... 85 3e-16
AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6 pr... 85 3e-16
AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein TAX... 75 3e-13
X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6 prot... 75 4e-13
S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140 pro... 65 2e-10
>D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 288
Score = 84.6 bits (200), Expect = 3e-16
Identities = 39/65 (60%), Positives = 45/65 (69%)
Frame = +2
Query: 509 LAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHF 688
L GRH GKRVV + L SGLLLVTGP N PLRR Q++VI TST+I + N K+PKH
Sbjct: 153 LTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHL 212
Query: 689 NDDYF 703
D YF
Sbjct: 213 TDAYF 217
Score = 65.3 bits (152), Expect = 2e-10
Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Frame = +3
Query: 324 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIRPNLKIGT 497
L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT
Sbjct: 89 LATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGT 148
Query: 498 VCIL 509
+ I+
Sbjct: 149 ILII 152
>BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 84.6 bits (200), Expect = 3e-16
Identities = 39/65 (60%), Positives = 45/65 (69%)
Frame = +2
Query: 509 LAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHF 688
L GRH GKRVV + L SGLLLVTGP N PLRR Q++VI TST+I + N K+PKH
Sbjct: 153 LTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHL 212
Query: 689 NDDYF 703
D YF
Sbjct: 213 TDAYF 217
Score = 65.3 bits (152), Expect = 2e-10
Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Frame = +3
Query: 324 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIRPNLKIGT 497
L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT
Sbjct: 89 LATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGT 148
Query: 498 VCIL 509
+ I+
Sbjct: 149 ILII 152
>BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 84.6 bits (200), Expect = 3e-16
Identities = 39/65 (60%), Positives = 45/65 (69%)
Frame = +2
Query: 509 LAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHF 688
L GRH GKRVV + L SGLLLVTGP N PLRR Q++VI TST+I + N K+PKH
Sbjct: 153 LTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHL 212
Query: 689 NDDYF 703
D YF
Sbjct: 213 TDAYF 217
Score = 65.3 bits (152), Expect = 2e-10
Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Frame = +3
Query: 324 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIRPNLKIGT 497
L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT
Sbjct: 89 LATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGT 148
Query: 498 VCIL 509
+ I+
Sbjct: 149 ILII 152
>BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 84.6 bits (200), Expect = 3e-16
Identities = 39/65 (60%), Positives = 45/65 (69%)
Frame = +2
Query: 509 LAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHF 688
L GRH GKRVV + L SGLLLVTGP N PLRR Q++VI TST+I + N K+PKH
Sbjct: 153 LTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHL 212
Query: 689 NDDYF 703
D YF
Sbjct: 213 TDAYF 217
Score = 65.3 bits (152), Expect = 2e-10
Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Frame = +3
Query: 324 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIRPNLKIGT 497
L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT
Sbjct: 89 LATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGT 148
Query: 498 VCIL 509
+ I+
Sbjct: 149 ILII 152
>BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 84.6 bits (200), Expect = 3e-16
Identities = 39/65 (60%), Positives = 45/65 (69%)
Frame = +2
Query: 509 LAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHF 688
L GRH GKRVV + L SGLLLVTGP N PLRR Q++VI TST+I + N K+PKH
Sbjct: 153 LTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHL 212
Query: 689 NDDYF 703
D YF
Sbjct: 213 TDAYF 217
Score = 65.3 bits (152), Expect = 2e-10
Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Frame = +3
Query: 324 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIRPNLKIGT 497
L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT
Sbjct: 89 LATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGT 148
Query: 498 VCIL 509
+ I+
Sbjct: 149 ILII 152
>BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 84.6 bits (200), Expect = 3e-16
Identities = 39/65 (60%), Positives = 45/65 (69%)
Frame = +2
Query: 509 LAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHF 688
L GRH GKRVV + L SGLLLVTGP N PLRR Q++VI TST+I + N K+PKH
Sbjct: 153 LTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHL 212
Query: 689 NDDYF 703
D YF
Sbjct: 213 TDAYF 217
Score = 65.3 bits (152), Expect = 2e-10
Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Frame = +3
Query: 324 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIRPNLKIGT 497
L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT
Sbjct: 89 LATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGT 148
Query: 498 VCIL 509
+ I+
Sbjct: 149 ILII 152
>BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 84.6 bits (200), Expect = 3e-16
Identities = 39/65 (60%), Positives = 45/65 (69%)
Frame = +2
Query: 509 LAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHF 688
L GRH GKRVV + L SGLLLVTGP N PLRR Q++VI TST+I + N K+PKH
Sbjct: 153 LTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHL 212
Query: 689 NDDYF 703
D YF
Sbjct: 213 TDAYF 217
Score = 65.3 bits (152), Expect = 2e-10
Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Frame = +3
Query: 324 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIRPNLKIGT 497
L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT
Sbjct: 89 LATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGT 148
Query: 498 VCIL 509
+ I+
Sbjct: 149 ILII 152
>BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 84.6 bits (200), Expect = 3e-16
Identities = 39/65 (60%), Positives = 45/65 (69%)
Frame = +2
Query: 509 LAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHF 688
L GRH GKRVV + L SGLLLVTGP N PLRR Q++VI TST+I + N K+PKH
Sbjct: 153 LTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHL 212
Query: 689 NDDYF 703
D YF
Sbjct: 213 TDAYF 217
Score = 65.3 bits (152), Expect = 2e-10
Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Frame = +3
Query: 324 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIRPNLKIGT 497
L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT
Sbjct: 89 LATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGT 148
Query: 498 VCIL 509
+ I+
Sbjct: 149 ILII 152
>BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 84.6 bits (200), Expect = 3e-16
Identities = 39/65 (60%), Positives = 45/65 (69%)
Frame = +2
Query: 509 LAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHF 688
L GRH GKRVV + L SGLLLVTGP N PLRR Q++VI TST+I + N K+PKH
Sbjct: 153 LTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHL 212
Query: 689 NDDYF 703
D YF
Sbjct: 213 TDAYF 217
Score = 65.3 bits (152), Expect = 2e-10
Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Frame = +3
Query: 324 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIRPNLKIGT 497
L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT
Sbjct: 89 LATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGT 148
Query: 498 VCIL 509
+ I+
Sbjct: 149 ILII 152
>AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 84.6 bits (200), Expect = 3e-16
Identities = 39/65 (60%), Positives = 45/65 (69%)
Frame = +2
Query: 509 LAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHF 688
L GRH GKRVV + L SGLLLVTGP N PLRR Q++VI TST+I + N K+PKH
Sbjct: 153 LTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHL 212
Query: 689 NDDYF 703
D YF
Sbjct: 213 TDAYF 217
Score = 65.3 bits (152), Expect = 2e-10
Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Frame = +3
Query: 324 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIRPNLKIGT 497
L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT
Sbjct: 89 LATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGT 148
Query: 498 VCIL 509
+ I+
Sbjct: 149 ILII 152
>AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 289
Score = 74.9 bits (176), Expect = 3e-13
Identities = 37/66 (56%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Frame = +2
Query: 509 LAGRHAGKR-VVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKH 685
L GR GK VV + L SGLLLVTGP N PLRR Q++VI TST+I + N K+PKH
Sbjct: 153 LTGRRRGKNWVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKH 212
Query: 686 FNDDYF 703
D YF
Sbjct: 213 LTDAYF 218
Score = 65.3 bits (152), Expect = 2e-10
Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Frame = +3
Query: 324 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIRPNLKIGT 497
L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT
Sbjct: 89 LATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGT 148
Query: 498 VCIL 509
+ I+
Sbjct: 149 ILII 152
>X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 74.5 bits (175), Expect = 4e-13
Identities = 36/65 (55%), Positives = 44/65 (67%)
Frame = +2
Query: 509 LAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHF 688
L GRH GKRVV + L SGLLLVT ++ PLRR Q++VI TST+I + N K+PKH
Sbjct: 153 LTGRHRGKRVVFLKQLASGLLLVTDLWSSIEVPLRRTHQKFVIATSTKIDISNVKIPKHL 212
Query: 689 NDDYF 703
D YF
Sbjct: 213 TDAYF 217
Score = 65.3 bits (152), Expect = 2e-10
Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Frame = +3
Query: 324 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIRPNLKIGT 497
L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT
Sbjct: 89 LATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGT 148
Query: 498 VCIL 509
+ I+
Sbjct: 149 ILII 152
>S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140
product protein.
Length = 207
Score = 65.3 bits (152), Expect = 2e-10
Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Frame = +3
Query: 324 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIRPNLKIGT 497
L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT
Sbjct: 28 LATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGT 87
Query: 498 VCIL 509
+ I+
Sbjct: 88 ILII 91
Score = 46.8 bits (106), Expect = 8e-05
Identities = 26/65 (40%), Positives = 31/65 (47%)
Frame = +2
Query: 509 LAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHF 688
L GRH GKRVV + L SGLLLVTGP + + + K+PKH
Sbjct: 92 LTGRHRGKRVVFLKQLASGLLLVTGPLVSIEFLYEEHTRNLSLPLQPKSISAIVKIPKHL 151
Query: 689 NDDYF 703
D YF
Sbjct: 152 TDAYF 156
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,328,491
Number of Sequences: 237096
Number of extensions: 2320829
Number of successful extensions: 4604
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4590
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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