Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0858
         (749 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p pro...   108   7e-24
AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-P...   108   7e-24
AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-P...   108   7e-24
BT023652-1|AAY85052.1|  106|Drosophila melanogaster IP05252p pro...    29   5.1  
AE013599-1424|AAF58550.1|  106|Drosophila melanogaster CG13171-P...    29   5.1  

>AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p
           protein.
          Length = 262

 Score =  108 bits (260), Expect = 7e-24
 Identities = 48/65 (73%), Positives = 56/65 (86%)
 Frame = +2

Query: 509 LAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHF 688
           LAGRH GKRVVL+ +L SGLLLVTGPFA NSCPLRR+ QRYVIGTS+++ LG FK+P+H 
Sbjct: 123 LAGRHQGKRVVLLKVLASGLLLVTGPFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHL 182

Query: 689 NDDYF 703
           ND YF
Sbjct: 183 NDAYF 187



 Score = 62.5 bits (145), Expect = 6e-10
 Identities = 37/104 (35%), Positives = 53/104 (50%)
 Frame = +3

Query: 240 FLQIQMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQE 419
           + + QM+ ++A Y+                  VK+IGG KNGG RTV LK+ K+ YPT+ 
Sbjct: 33  YSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERTVFLKKSKASYPTKT 92

Query: 420 KIRASSGGRPFSKHVRRIRPNLKIGTVCILSLVDMQARGLYLLE 551
            ++       FS+H R  R NL  GTV IL     Q + + LL+
Sbjct: 93  FVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLK 136


>AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-PB,
           isoform B protein.
          Length = 262

 Score =  108 bits (260), Expect = 7e-24
 Identities = 48/65 (73%), Positives = 56/65 (86%)
 Frame = +2

Query: 509 LAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHF 688
           LAGRH GKRVVL+ +L SGLLLVTGPFA NSCPLRR+ QRYVIGTS+++ LG FK+P+H 
Sbjct: 123 LAGRHQGKRVVLLKVLASGLLLVTGPFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHL 182

Query: 689 NDDYF 703
           ND YF
Sbjct: 183 NDAYF 187



 Score = 62.5 bits (145), Expect = 6e-10
 Identities = 37/104 (35%), Positives = 53/104 (50%)
 Frame = +3

Query: 240 FLQIQMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQE 419
           + + QM+ ++A Y+                  VK+IGG KNGG RTV LK+ K+ YPT+ 
Sbjct: 33  YSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERTVFLKKSKASYPTKT 92

Query: 420 KIRASSGGRPFSKHVRRIRPNLKIGTVCILSLVDMQARGLYLLE 551
            ++       FS+H R  R NL  GTV IL     Q + + LL+
Sbjct: 93  FVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLK 136


>AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-PA,
           isoform A protein.
          Length = 243

 Score =  108 bits (260), Expect = 7e-24
 Identities = 48/65 (73%), Positives = 56/65 (86%)
 Frame = +2

Query: 509 LAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHF 688
           LAGRH GKRVVL+ +L SGLLLVTGPFA NSCPLRR+ QRYVIGTS+++ LG FK+P+H 
Sbjct: 104 LAGRHQGKRVVLLKVLASGLLLVTGPFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHL 163

Query: 689 NDDYF 703
           ND YF
Sbjct: 164 NDAYF 168



 Score = 41.1 bits (92), Expect = 0.002
 Identities = 22/58 (37%), Positives = 32/58 (55%)
 Frame = +3

Query: 378 VPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILSLVDMQARGLYLLE 551
           VP+K+ K+ YPT+  ++       FS+H R  R NL  GTV IL     Q + + LL+
Sbjct: 60  VPIKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLK 117


>BT023652-1|AAY85052.1|  106|Drosophila melanogaster IP05252p
           protein.
          Length = 106

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 15/46 (32%), Positives = 30/46 (65%)
 Frame = +3

Query: 414 QEKIRASSGGRPFSKHVRRIRPNLKIGTVCILSLVDMQARGLYLLE 551
           +++IR ++G R  + H  + R  +++G +C+ S  ++Q +GL LLE
Sbjct: 42  EDRIRETNGERFQNLHCSKCR--MELGLLCLQSERNVQLKGLSLLE 85


>AE013599-1424|AAF58550.1|  106|Drosophila melanogaster CG13171-PA
           protein.
          Length = 106

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 15/46 (32%), Positives = 30/46 (65%)
 Frame = +3

Query: 414 QEKIRASSGGRPFSKHVRRIRPNLKIGTVCILSLVDMQARGLYLLE 551
           +++IR ++G R  + H  + R  +++G +C+ S  ++Q +GL LLE
Sbjct: 42  EDRIRETNGERFQNLHCSKCR--MELGLLCLQSERNVQLKGLSLLE 85


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,281,600
Number of Sequences: 53049
Number of extensions: 710143
Number of successful extensions: 1747
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1747
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)