Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0857
         (720 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370040-1|ABD18601.1|  121|Anopheles gambiae putative TIL domai...    27   0.58 
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   2.4  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    25   3.1  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   3.1  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   4.1  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    23   7.2  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          23   9.5  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   9.5  

>DQ370040-1|ABD18601.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 27.1 bits (57), Expect = 0.58
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -1

Query: 177 C*PACGVRRCSEGRRASPECHR 112
           C PACG R C+  R+    C R
Sbjct: 70  CGPACGDRTCTNQRKNDSACRR 91


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
 Frame = -3

Query: 625 LVPCLPTTPHPQVFPPR**TRCF*TP---SPLLSDS*RLTYLCNSKEPVFRVDGPQYAVL 455
           L+  + TTP P+VF P+        P   S ++     L+++ + K+ VF    P+ A  
Sbjct: 210 LLSSVSTTPSPEVFSPKKMENIESPPSIYSGIIKHDDELSFVSSPKDSVFPETIPEEASS 269

Query: 454 VE 449
           VE
Sbjct: 270 VE 271


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 304 DDKHMFSQPSFATGDHCPRRRAKHF 230
           +D+H+F        DHC +R   HF
Sbjct: 226 EDQHVFHVVKSRNFDHCEQRMGFHF 250


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 304 DDKHMFSQPSFATGDHCPRRRAKHF 230
           +D+H+F        DHC +R   HF
Sbjct: 226 EDQHVFHVVKSRNFDHCEQRMGFHF 250


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -3

Query: 142 GSQGQPGVPPDPT 104
           G  GQ G PPDPT
Sbjct: 126 GRPGQSGSPPDPT 138


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +1

Query: 592  EGGVWWEGMGPAPERLVDWKGQPWDPSKKTPAA 690
            E   WW+ +  A  R++    + W   ++T AA
Sbjct: 994  ESAEWWDRIQQAARRILSVLQEDWREEQQTLAA 1026


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +3

Query: 594 GWGVVGRHGTSSGTPRRLERSTLGPQQ 674
           GWG   R  T + TP  +E    GP Q
Sbjct: 460 GWGAEYRRQTVTSTPCWIELHLNGPLQ 486


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +1

Query: 607  WEGMGPAPERLVDWKGQPWDPSKKTPAAHPNSR 705
            W  +  A +R+     Q WD  +   AAH N +
Sbjct: 993  WSRICEAAKRITASLQQAWDDERAALAAHGNEQ 1025


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 875,274
Number of Sequences: 2352
Number of extensions: 21585
Number of successful extensions: 59
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)