Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0856
         (593 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0640 + 25744048-25745021,25745128-25745273,25747870-257479...    28   4.9  
03_02_0285 - 7096088-7096506,7096817-7096982,7097114-7097296,709...    28   6.5  

>11_06_0640 +
           25744048-25745021,25745128-25745273,25747870-25747945,
           25747996-25748230
          Length = 476

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +1

Query: 139 YLIASTLLITRHILRTDALYRRDGRI-TFIVQFTV 240
           YL  +T L+TRH+LR   L   DGR   F+V F++
Sbjct: 243 YLFFATTLVTRHLLRGALL--GDGRFYVFLVVFSI 275


>03_02_0285 -
           7096088-7096506,7096817-7096982,7097114-7097296,
           7097529-7097768
          Length = 335

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 237 GKLDNKGDPAVASVQGVRSQYVASDQ*SGCD 145
           G + + GDPAVA+ + +   Y A+ Q   CD
Sbjct: 276 GLVSSSGDPAVAATKALVQAYSANGQRFSCD 306


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,596,236
Number of Sequences: 37544
Number of extensions: 262041
Number of successful extensions: 580
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 580
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1411925004
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)