Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0856
         (593 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024807-3|AAK84614.1|  252|Caenorhabditis elegans Hypothetical ...    29   2.5  
AC006723-3|AAF59427.1|  881|Caenorhabditis elegans Hypothetical ...    27   7.6  

>AC024807-3|AAK84614.1|  252|Caenorhabditis elegans Hypothetical
           protein Y53G8AL.3 protein.
          Length = 252

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +3

Query: 72  YLLNCFD*KDKEITKVPSRTTPVSYRIHSIDHS 170
           + L+C D      T+VP+ TTPVS    S  H+
Sbjct: 25  FQLSCLDTTSSSTTEVPATTTPVSLEFVSSAHT 57


>AC006723-3|AAF59427.1|  881|Caenorhabditis elegans Hypothetical
           protein Y19D10B.4 protein.
          Length = 881

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 11/45 (24%), Positives = 25/45 (55%)
 Frame = +3

Query: 177 IANGRLVPTRRPDHLYCPIYRELVFCL*TQTNR*SHNVYRAKIEI 311
           + NGRL+P  + ++   PI+++++      T+   +N +   +EI
Sbjct: 620 MTNGRLIPLGKTENSIFPIFKDMMTVTTLTTDNEQYNCHDTALEI 664


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,780,525
Number of Sequences: 27780
Number of extensions: 242027
Number of successful extensions: 569
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 569
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)