Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0855
(686 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 129 2e-30
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 6e-20
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 6e-19
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 9e-17
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 5e-16
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 78 8e-15
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 3e-12
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 4e-12
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 68 6e-12
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 66 3e-11
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 3e-11
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 62 4e-10
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 7e-10
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 61 9e-10
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 61 9e-10
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 54 1e-07
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 52 6e-07
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 6e-07
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 50 1e-06
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 50 1e-06
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 50 1e-06
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 48 7e-06
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 7e-06
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 47 2e-05
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 46 3e-05
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 44 2e-04
SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6) 43 3e-04
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 42 5e-04
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 41 8e-04
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 40 0.002
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 39 0.004
SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27) 38 0.008
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 37 0.013
SB_55048| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_39160| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05) 32 0.50
SB_11957| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_58000| Best HMM Match : MATH (HMM E-Value=1.1e-19) 29 2.7
SB_53656| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_44879| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_44274| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_47383| Best HMM Match : LON (HMM E-Value=1.3) 28 6.2
SB_53758| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29) 28 8.1
SB_47096| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 129 bits (312), Expect = 2e-30
Identities = 55/76 (72%), Positives = 67/76 (88%)
Frame = +2
Query: 251 VDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNI 430
+DMGFEPQIR II+QIRPDRQTLMWSATWPKEV+ LA D+L DY+ I +GSL L+ANH I
Sbjct: 219 LDMGFEPQIRTIIDQIRPDRQTLMWSATWPKEVQGLAHDFLSDYVHITVGSLGLTANHKI 278
Query: 431 LQIVDICQEHEKENKL 478
LQIVD+C++HEKE+ +
Sbjct: 279 LQIVDVCEDHEKEHNV 294
Score = 125 bits (302), Expect = 3e-29
Identities = 60/84 (71%), Positives = 68/84 (80%)
Frame = +3
Query: 3 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 182
LVL PTRELAQQ+Q+VA G +R+TC++GGAPK Q R+LERGVEI IATPGRLID
Sbjct: 136 LVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYGGAPKGPQIRELERGVEICIATPGRLID 195
Query: 183 FLEKGTTNLQRCTYLVLDEADRML 254
LE TNL+RCTYLVLDEADRML
Sbjct: 196 MLESRKTNLRRCTYLVLDEADRML 219
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +1
Query: 523 KTIIFVETKRKAENISRNIRRYG 591
+T+IF ETKR+A+ ++R +R G
Sbjct: 308 QTLIFTETKRRADELTRKLRSDG 330
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 94.7 bits (225), Expect = 6e-20
Identities = 47/83 (56%), Positives = 55/83 (66%)
Frame = +3
Query: 3 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 182
L+ APTREL QQI A FG + VFGG K EQ++ L+ G EIV+ATPGRLID
Sbjct: 594 LICAPTRELCQQIYTEARRFGKAYNIHVVAVFGGGNKYEQSKALQEGAEIVVATPGRLID 653
Query: 183 FLEKGTTNLQRCTYLVLDEADRM 251
++ TNL R TYLV DEADRM
Sbjct: 654 HVKAKATNLHRVTYLVFDEADRM 676
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +1
Query: 529 IIFVETKRKAENISRNIRRYGWPAVCMPGDKTQQERDEVLYQFKEGRASILV 684
+IFV K +E ++ N+R+ + + GD Q ER +VL QFK+ ILV
Sbjct: 733 LIFVTKKLNSEELATNLRKNDFEVALLHGDMDQFERSKVLGQFKKREIPILV 784
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 91.5 bits (217), Expect = 6e-19
Identities = 48/108 (44%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Frame = +3
Query: 3 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 182
+V+ PTRELA QI + F + +R CV+GG EQ +L+RG EI++ TPGR+ID
Sbjct: 148 IVMTPTRELAIQIHRECKKFCKPNNLRCVCVYGGTGISEQIAELKRGAEIIVCTPGRMID 207
Query: 183 FLEKG---TTNLQRCTYLVLDEADRMLIWDLNHKSEKSLSKYAQTDRL 317
L TN QRCTYLVLDEADRM +D+ + + + +Y + R+
Sbjct: 208 MLTANNGRVTNCQRCTYLVLDEADRM--FDMGFEPQITKIRYPKVMRI 253
Score = 54.8 bits (126), Expect = 6e-08
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 12/86 (13%)
Frame = +2
Query: 254 DMGFEPQIRKI--------IEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQ 409
DMGFEPQI KI I+ IRPDRQT+M+SAT+P++++ LA L I+I +G
Sbjct: 235 DMGFEPQITKIRYPKVMRIIDCIRPDRQTVMFSATFPRQMEALARKILDKPIEIQVGGRS 294
Query: 410 L---SANHNI-LQIVDICQEHEKENK 475
+ N+ L + D E E E K
Sbjct: 295 VVCSDVEQNVALGLQDSDDEAEAEEK 320
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 84.2 bits (199), Expect = 9e-17
Identities = 39/84 (46%), Positives = 53/84 (63%)
Frame = +3
Query: 3 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 182
+ +APTRELA QI A F H + +R +GG Q R L+ G +++ TPGRL D
Sbjct: 792 MCIAPTRELANQIYLEARKFAHGTMLRPVVCYGGVSVSHQLRQLQSGCNLLVGTPGRLTD 851
Query: 183 FLEKGTTNLQRCTYLVLDEADRML 254
F+EKG +L+ +L+LDEADRML
Sbjct: 852 FIEKGKVSLKGLQFLILDEADRML 875
Score = 72.9 bits (171), Expect = 2e-13
Identities = 37/94 (39%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Frame = +2
Query: 251 VDMGFEPQIRKIIEQI----RPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSA 418
+DMGFEP IR+I+E + + +RQTLM+SAT+P+E+++LA D+L DY+ + +G +
Sbjct: 875 LDMGFEPAIRRIVESMGMPDKSERQTLMFSATFPEEIQRLAGDFLNDYLFLTVGRVG-GT 933
Query: 419 NHNILQIVDICQEHEKENKLNVLLQEIGQSKNLV 520
+I Q V ++EK ++L +L + G + LV
Sbjct: 934 TSDIEQTVIEVTDNEKRDRLTQILGDAGTDRTLV 967
Score = 51.2 bits (117), Expect = 8e-07
Identities = 21/54 (38%), Positives = 37/54 (68%)
Frame = +1
Query: 523 KTIIFVETKRKAENISRNIRRYGWPAVCMPGDKTQQERDEVLYQFKEGRASILV 684
+T++FVE+KR A+ ++ + G+P + GD+ QQER+E L F++GR +L+
Sbjct: 964 RTLVFVESKRSADFLAIFLSGEGFPTTSIHGDRLQQEREEALDDFRKGRCPVLI 1017
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 81.8 bits (193), Expect = 5e-16
Identities = 41/84 (48%), Positives = 50/84 (59%)
Frame = +3
Query: 3 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 182
LVLAPTRELAQQIQ+V G +V+ GG RE LE GV +V+ TPGR+ D
Sbjct: 163 LVLAPTRELAQQIQKVVLALGDYMHVKCHACIGGTNVREDRMKLEEGVHVVVGTPGRVFD 222
Query: 183 FLEKGTTNLQRCTYLVLDEADRML 254
+ +G N + VLDEAD ML
Sbjct: 223 MINRGVLNTRDIKLFVLDEADEML 246
Score = 37.9 bits (84), Expect = 0.008
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = +1
Query: 523 KTIIFVETKRKAENISRNIRRYGWPAVCMPGDKTQQERDEVLYQFKEGRASILV 684
+ +IF T+RK + ++ + M GD +Q+ERD ++ +F+ G + +L+
Sbjct: 332 QAVIFANTRRKVDWLAAKMTEKDHTVSSMHGDMSQKERDIIMKEFRSGSSRVLI 385
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +2
Query: 260 GFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQI 391
GF+ QI + ++ Q ++ SAT P +V ++ ++ D ++I
Sbjct: 249 GFKDQIYDVFTRLPTSVQVVLLSATMPTDVLEVTNKFMRDVVRI 292
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 77.8 bits (183), Expect = 8e-15
Identities = 38/104 (36%), Positives = 61/104 (58%)
Frame = +3
Query: 3 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 182
LV+APTRELA+Q+ + S + C++GG P Q + G+++++ TPGR++D
Sbjct: 151 LVMAPTRELAKQVGNEFENL--KSNLEVYCIYGGMPYEPQENAINSGLDVLVGTPGRILD 208
Query: 183 FLEKGTTNLQRCTYLVLDEADRMLIWDLNHKSEKSLSKYAQTDR 314
F+ +GT +L + ++VLDE DRML E+ L+ DR
Sbjct: 209 FMRQGTLDLSKLKHVVLDEVDRMLDMGFAESVEEVLAASYAEDR 252
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 69.7 bits (163), Expect = 2e-12
Identities = 37/84 (44%), Positives = 49/84 (58%)
Frame = +3
Query: 3 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 182
L +APTRELA+QI A F + ++ +GG QA LERG ++ TPGRL D
Sbjct: 556 LCVAPTRELAKQIYIEARKFSDHTPIKVCVCYGGVSVPYQASQLERGCHFLVGTPGRLQD 615
Query: 183 FLEKGTTNLQRCTYLVLDEADRML 254
F+ + L +L+LDEADRML
Sbjct: 616 FVSREKIYLGSIQHLILDEADRML 639
Score = 56.0 bits (129), Expect = 3e-08
Identities = 34/91 (37%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
Frame = +2
Query: 251 VDMGFEPQIRKIIEQ----IRPDRQTLMWSATWPKEVKKLAEDYL-GDYIQINIGSLQLS 415
+D+GF P I K+IE+ + RQTLM+SAT+P E++ LA +L DY+ + +G +
Sbjct: 639 LDLGFGPDIHKLIEESNMTAKESRQTLMFSATFPDEIQHLAGSFLKPDYLFLAVGRVG-G 697
Query: 416 ANHNILQIVDICQEHEKENKLNVLLQEIGQS 508
N +I Q V EK +KL+ +L G++
Sbjct: 698 TNLDITQHVITVNGSEKRDKLHEILSATGEN 728
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 69.3 bits (162), Expect = 3e-12
Identities = 31/66 (46%), Positives = 43/66 (65%)
Frame = +3
Query: 57 DFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 236
DF + S R V+GGA Q R+L+R +++ATPGRL+D +++G L +LVLD
Sbjct: 947 DFSYRSLCRPCVVYGGADIGSQLRELDRNCHLLVATPGRLVDMMDRGRVGLDSIRFLVLD 1006
Query: 237 EADRML 254
EADRML
Sbjct: 1007 EADRML 1012
Score = 67.7 bits (158), Expect = 8e-12
Identities = 41/88 (46%), Positives = 57/88 (64%), Gaps = 4/88 (4%)
Frame = +2
Query: 251 VDMGFEPQIRKIIEQ-IRPD---RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSA 418
+DMGFEPQIR+I++Q P RQTLM+SAT+PKE++ LA D+L +YI + +G + S
Sbjct: 1012 LDMGFEPQIRRIVDQDSMPKTGIRQTLMFSATFPKEIQMLARDFLENYIFLAVGKVG-ST 1070
Query: 419 NHNILQIVDICQEHEKENKLNVLLQEIG 502
+ NI Q V E +K + L LL G
Sbjct: 1071 SENITQKVVWVDEFDKRSFLLDLLNASG 1098
Score = 44.4 bits (100), Expect = 9e-05
Identities = 21/57 (36%), Positives = 35/57 (61%)
Frame = +1
Query: 514 PGAKTIIFVETKRKAENISRNIRRYGWPAVCMPGDKTQQERDEVLYQFKEGRASILV 684
P T++FVETK+ A+ + + + G+ + GD++Q+ER+E L F+ G ILV
Sbjct: 1099 PQQLTLVFVETKKGADALEMFLAKDGYYCTSIHGDRSQREREEALRTFRCGDTPILV 1155
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 68.9 bits (161), Expect = 4e-12
Identities = 31/70 (44%), Positives = 49/70 (70%)
Frame = +2
Query: 257 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 436
MGFEP+I+KI+ IRPDRQT+M SATWP V+++A+ Y+ D +++ +G L L N+++
Sbjct: 1 MGFEPEIKKILLDIRPDRQTVMTSATWPPGVQRMADQYMTDPVRVFVGCLDL----NVIE 56
Query: 437 IVDICQEHEK 466
++ EK
Sbjct: 57 FIEGMAPGEK 66
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 68.1 bits (159), Expect = 6e-12
Identities = 44/106 (41%), Positives = 61/106 (57%), Gaps = 2/106 (1%)
Frame = +3
Query: 3 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 182
L+L PTRELA QI + G V+ + GG QA L + I+IATPGRLID
Sbjct: 36 LILTPTRELAFQISEQCEALGSGIGVKCAVIVGGIDMMSQALMLAKKPHIIIATPGRLID 95
Query: 183 FLE--KGTTNLQRCTYLVLDEADRMLIWDLNHKSEKSLSKYAQTDR 314
LE KG +L+ YLV+DEADR+L +++ + E + + +T R
Sbjct: 96 HLENTKG-FSLRTLKYLVMDEADRIL--NMDFEKEDYIHRVGRTAR 138
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 66.1 bits (154), Expect = 3e-11
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 182
+VL PTRELA QI G ++ + GG +QA L +VIATPGRL D
Sbjct: 79 VVLTPTRELAFQIADQFKVLGRPIGLKEAVIVGGLDMMKQALSLANKPHVVIATPGRLAD 138
Query: 183 FLEK-GTTNLQRCTYLVLDEADRML 254
++ T NL++ +LVLDEADR+L
Sbjct: 139 HIKSTDTLNLKKIQFLVLDEADRLL 163
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 66.1 bits (154), Expect = 3e-11
Identities = 37/84 (44%), Positives = 45/84 (53%)
Frame = +3
Query: 3 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 182
LVL+PTRELA QIQ+V G V+ GG E R L+ G IV TPGR+ D
Sbjct: 69 LVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGTPGRVFD 128
Query: 183 FLEKGTTNLQRCTYLVLDEADRML 254
+ + + LVLDEAD ML
Sbjct: 129 MIRRRNLRTRSIKMLVLDEADEML 152
Score = 41.9 bits (94), Expect = 5e-04
Identities = 16/54 (29%), Positives = 32/54 (59%)
Frame = +1
Query: 523 KTIIFVETKRKAENISRNIRRYGWPAVCMPGDKTQQERDEVLYQFKEGRASILV 684
+ +IF TKRK + ++ +R + M GD Q+ER+ ++ F+ G++ +L+
Sbjct: 238 QAVIFCNTKRKVDWLTEKMREANFTVASMHGDMPQKEREAIMKDFRAGQSRVLI 291
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +2
Query: 251 VDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQI 391
++ GF+ QI + + P Q ++ SAT P E+ ++ ++ D I+I
Sbjct: 152 LNKGFKEQIYDVYRYLPPATQVVLLSATLPHEILEMTSKFMTDPIRI 198
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 62.1 bits (144), Expect = 4e-10
Identities = 33/91 (36%), Positives = 52/91 (57%)
Frame = +3
Query: 6 VLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDF 185
++ P RELA QI + A H + R+ + GG ++ DLE V++++ATPG L+ +
Sbjct: 460 IVVPARELATQILKTAKSLCHHARFRSVGLIGGRKQKWMRDDLESPVDLLVATPGTLLKY 519
Query: 186 LEKGTTNLQRCTYLVLDEADRMLIWDLNHKS 278
+K T+LV+DEAD M +D + KS
Sbjct: 520 RQKDRLFFSDLTHLVIDEADTM--FDASFKS 548
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 61.3 bits (142), Expect = 7e-10
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 182
++++PTREL+ Q VA D + GG ++ +A L++GV ++IATPGRL+D
Sbjct: 648 IIISPTRELSLQTYGVARDLLKHHNFTYGIIMGGVNRKAEAERLQKGVNLLIATPGRLLD 707
Query: 183 FLEKGTTNL-QRCTYLVLDEADRML 254
L+ L + LV+DEADR+L
Sbjct: 708 HLQNTQGFLYKNLQCLVIDEADRIL 732
Score = 35.9 bits (79), Expect = 0.031
Identities = 16/38 (42%), Positives = 28/38 (73%)
Frame = +2
Query: 251 VDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAE 364
+++GFE ++R+II + RQT+++SAT K V+ LA+
Sbjct: 732 LEIGFEEEMRQIIRILPSKRQTVLFSATQTKNVEDLAK 769
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 60.9 bits (141), Expect = 9e-10
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Frame = +3
Query: 3 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG-------VEIVIA 161
LVL PTRELA Q Q+ + G + GG ++ L V +++A
Sbjct: 119 LVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSLKDDILRLYNKDIFVHVVVHVIVA 178
Query: 162 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLIWDLNHKSEK 284
TPGR++D ++K ++ +C LV+DEAD++L D E+
Sbjct: 179 TPGRVLDLMKKKLADMSKCQMLVMDEADKLLSMDFKKMLEQ 219
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/90 (26%), Positives = 50/90 (55%)
Frame = +2
Query: 251 VDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNI 430
+ M F+ + +II+ + +RQ L++SAT+P V+ E +L +IN+ + H +
Sbjct: 209 LSMDFKKMLEQIIKHLPENRQILLFSATFPISVRDFKEKHLRKPYEINL--MDELTLHGV 266
Query: 431 LQIVDICQEHEKENKLNVLLQEIGQSKNLV 520
Q +E +K + LN L Q++ +++++
Sbjct: 267 TQYYAFVEEKQKVHCLNTLFQKLQINQSII 296
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 60.9 bits (141), Expect = 9e-10
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Frame = +3
Query: 3 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG-------VEIVIA 161
LVL PTRELA Q Q+ + G + GG ++ L V +++A
Sbjct: 119 LVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSLKDDILRLYNKDIFVHVVVHVIVA 178
Query: 162 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLIWDLNHKSEK 284
TPGR++D ++K ++ +C LV+DEAD++L D E+
Sbjct: 179 TPGRVLDLMKKKLADMSKCQMLVMDEADKLLSMDFKKMLEQ 219
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/90 (26%), Positives = 50/90 (55%)
Frame = +2
Query: 251 VDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNI 430
+ M F+ + +II+ + +RQ L++SAT+P V+ E +L +IN+ + H +
Sbjct: 209 LSMDFKKMLEQIIKHLPENRQILLFSATFPISVRDFKEKHLRKPYEINL--MDELTLHGV 266
Query: 431 LQIVDICQEHEKENKLNVLLQEIGQSKNLV 520
Q +E +K + LN L Q++ +++++
Sbjct: 267 TQYYAFVEEKQKVHCLNTLFQKLQINQSII 296
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 53.6 bits (123), Expect = 1e-07
Identities = 37/88 (42%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAP-KREQARDLERGVEIVIATPGRLI 179
LV++PTRELA Q +V G+ + + GG K EQ R ++ IV+ TPGRL+
Sbjct: 126 LVISPTRELAYQTFEVLVKIGNKHDLSAGLIIGGKDLKNEQKRIMK--TNIVVCTPGRLL 183
Query: 180 DFLEKGTTNLQRCT---YLVLDEADRML 254
+++ T N CT LVLDEADR+L
Sbjct: 184 QHMDE-TPNFD-CTSLQILVLDEADRIL 209
Score = 44.8 bits (101), Expect = 7e-05
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +2
Query: 251 VDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYI 385
+DMGF P + IIE + +RQTL++SAT + VK LA L Y+
Sbjct: 209 LDMGFAPTLNAIIENLPSERQTLLYSATQTRSVKDLARLSLQSYV 253
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 51.6 bits (118), Expect = 6e-07
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 LVLAPTRELAQQIQQVAADF-GHTSYVRNTCVFGGAPKREQARDLERGV-EIVIATPGRL 176
LV+ TRELA QI + F + S ++ FGG ++ + L+ IV+ TPGR+
Sbjct: 119 LVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKKDQQTLKTNCPHIVVGTPGRI 178
Query: 177 IDFLEKGTTNLQRCTYLVLDEADRML 254
+ + T NL+ + +LDE D+ML
Sbjct: 179 LALTREKTLNLKHAKHFILDECDKML 204
Score = 31.5 bits (68), Expect = 0.66
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +1
Query: 523 KTIIFVETKRKAENISRNIRRYGWPAVCMPGDKTQQERDEVLYQFKEGRASILV 684
+ IIFV++ ++ +S + + +PA+C+ Q+ER QFK +LV
Sbjct: 337 QVIIFVKSVQRCTALSHLLLKQNFPAICIHRGMKQEERLARYQQFKNFEKRMLV 390
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 51.6 bits (118), Expect = 6e-07
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 LVLAPTRELAQQIQQVAADF-GHTSYVRNTCVFGGAPKREQARDLERGV-EIVIATPGRL 176
LV+ TRELA QI + F + S ++ FGG ++ + L+ IV+ TPGR+
Sbjct: 119 LVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKKDQQTLKTNCPHIVVGTPGRI 178
Query: 177 IDFLEKGTTNLQRCTYLVLDEADRML 254
+ + T NL+ + +LDE D+ML
Sbjct: 179 LALTREKTLNLKHAKHFILDECDKML 204
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/64 (34%), Positives = 41/64 (64%)
Frame = +2
Query: 251 VDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNI 430
+DMGFE +R I + RQTL++SAT PK+++ A+ L + +N+G +A+ ++
Sbjct: 29 IDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSALVKPVTVNVGRAG-AASLDV 87
Query: 431 LQIV 442
+Q++
Sbjct: 88 IQVL 91
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +1
Query: 523 KTIIFVETKRKAENISRNIRRYGWPAVCMPGDKTQQERDEVLYQFKEGRASILV 684
+ +IF E K ++I + G AV + GDK+Q+ER + +F +G +LV
Sbjct: 89 QVLIFAEKKSDVDDIHEYLLLKGVEAVAIHGDKSQEERVHAIREFHQGNKDVLV 142
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/64 (34%), Positives = 41/64 (64%)
Frame = +2
Query: 251 VDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNI 430
+DMGFE +R I + RQTL++SAT PK+++ A+ L + +N+G +A+ ++
Sbjct: 29 IDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSALVKPVTVNVGRAG-AASLDV 87
Query: 431 LQIV 442
+Q++
Sbjct: 88 IQVL 91
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +1
Query: 523 KTIIFVETKRKAENISRNIRRYGWPAVCMPGDKTQQERDEVLYQFKEGRASILV 684
+ +IF E K ++I + G AV + GDK+Q+ER + +F +G +LV
Sbjct: 89 QVLIFAEKKSDVDDIHEYLLLKGVEAVAIHGDKSQEERVHAIREFHQGNKDVLV 142
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/82 (36%), Positives = 41/82 (50%)
Frame = +3
Query: 69 TSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADR 248
T+ + V GG P Q L G ++V+ATPGRL+D L + TYLV+DE DR
Sbjct: 193 TARYKAVAVCGGVPVSTQTIALREGADVVVATPGRLLD--------LYKITYLVMDEPDR 244
Query: 249 MLIWDLNHKSEKSLSKYAQTDR 314
ML + + K + T R
Sbjct: 245 MLGMGMEEQLRKIVGLATGTSR 266
Score = 41.5 bits (93), Expect = 6e-04
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Frame = +2
Query: 257 MGFEPQIRKIIEQIRPD---RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHN 427
MG E Q+RKI+ RQTL+WSAT P+ +++LA + + I I +G L A +
Sbjct: 248 MGMEEQLRKIVGLATGTSRARQTLLWSATLPESLERLARSAVLNPITIQVGPGGLIA-PS 306
Query: 428 ILQIVDICQEHEKENKL 478
+ Q V ++K KL
Sbjct: 307 VQQNVVFLYHYQKPQKL 323
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 48.0 bits (109), Expect = 7e-06
Identities = 27/58 (46%), Positives = 32/58 (55%)
Frame = +3
Query: 3 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 176
LVL+PTRELA QIQ+V G V+ GG E R L+ G IV TPGR+
Sbjct: 7 LVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGTPGRV 64
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 48.0 bits (109), Expect = 7e-06
Identities = 25/68 (36%), Positives = 40/68 (58%)
Frame = +3
Query: 3 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 182
L++APTRELA Q++ + V+ + GG +Q R L++ EIV+ATPGRL +
Sbjct: 222 LIMAPTRELALQVKDHLVKAAKYTSVKVAAIVGGMAAPKQQRLLKQRPEIVVATPGRLWE 281
Query: 183 FLEKGTTN 206
+ + T+
Sbjct: 282 LISQVFTH 289
Score = 32.3 bits (70), Expect = 0.38
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 144 VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 254
V +V+ + EK +N+Q YLV+DEADRM+
Sbjct: 316 VVVVVVVVDTSVTNQEKHVSNIQLLRYLVIDEADRMV 352
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 LVLAPTRELAQQIQQVAADFGHTSYVRNTC-VFGGAPKREQARDLERGVEIVIATPGRLI 179
++L PTRE+A Q++ V G Y C VF G E+ + + I + TPGR+
Sbjct: 85 IILTPTREIAVQVKDVICAIG-CHYDGLACKVFIGGISLEEDKKALKSCHIAVGTPGRVK 143
Query: 180 DFLEKGTTNLQRCTYLVLDEADRML 254
+E+ + +LDEAD++L
Sbjct: 144 YLIEQKYLKTESVRMFILDEADKLL 168
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/82 (29%), Positives = 49/82 (59%)
Frame = +2
Query: 251 VDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNI 430
+ +GFE Q+++I+E++ RQT+++SAT P ++ +A L + I+ GS L +
Sbjct: 292 LQLGFEQQVQQILERLSNRRQTMLFSATIPPSIEAMASRLLNAPVFISAGSPSLPTK-AV 350
Query: 431 LQIVDICQEHEKENKLNVLLQE 496
Q++ +E K+ +L +L++
Sbjct: 351 KQLILWVEEKSKKKQLFSILKD 372
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +3
Query: 135 ERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 254
E GV++++ATPGR+++ + + +L V+DE D ML
Sbjct: 253 EMGVQVIVATPGRMVEIISRQAVDLTHVIGCVVDEVDTML 292
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 45.2 bits (102), Expect = 5e-05
Identities = 27/85 (31%), Positives = 44/85 (51%)
Frame = +3
Query: 3 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 182
L+L+PTRELA Q Q+ + G + ++++ + GG + V+ATPGR +
Sbjct: 355 LILSPTRELALQTQKFIKELGRFTGLKSSVILGG--------------DSVVATPGRFLH 400
Query: 183 FLEKGTTNLQRCTYLVLDEADRMLI 257
+ + L Y+V DEADR +
Sbjct: 401 VVMEMELKLSSVEYVVFDEADRQTL 425
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 43.6 bits (98), Expect = 2e-04
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 8/109 (7%)
Frame = +3
Query: 3 LVLAPTRELAQQIQQVAADFG-HTSYVR-NTCVFGGA-PKREQARDLERGVEIVIATPGR 173
+ L+PT ELA+Q +VA G H +++ N V G P+ ++ D I+I TPG
Sbjct: 177 ICLSPTYELARQTGKVAEAMGKHCPHIKINYAVRGNQFPRGQKCTD-----HIIIGTPGT 231
Query: 174 LIDFLEKGTT-NLQRCTYLVLDEADRMLI----WDLNHKSEKSLSKYAQ 305
L+D++ K ++ + VLDEAD M+ D + + KSL K Q
Sbjct: 232 LLDWIRKSKCFEPRKVSVFVLDEADIMIALQGHQDQSIRIHKSLHKDCQ 280
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/52 (25%), Positives = 29/52 (55%)
Frame = +1
Query: 529 IIFVETKRKAENISRNIRRYGWPAVCMPGDKTQQERDEVLYQFKEGRASILV 684
++F T+R A ++ + + G + G+ T ++R VL +F+ G+ +L+
Sbjct: 348 VVFCHTRRNAAWLAEKMVKEGHAVALLSGEITIEQRIAVLERFRLGKEKLLI 399
>SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6)
Length = 127
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/62 (33%), Positives = 41/62 (66%)
Frame = +2
Query: 251 VDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNI 430
+DMGF IR+++ ++ RQ L++SAT+ ++K LAE L + ++I + + + +A+ +
Sbjct: 16 LDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEV-ARRNTASDQV 74
Query: 431 LQ 436
LQ
Sbjct: 75 LQ 76
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 41.9 bits (94), Expect = 5e-04
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = +3
Query: 3 LVLAPTRELAQQ-IQQVAADFGHTSYVRNTCVFGGAPKREQA-RDLERGVEIVIATPGRL 176
+++ PTRELA Q + +V+ G S V + ++E+ +D IVI TP RL
Sbjct: 229 IIVVPTRELASQMLYEVSRLLGDKSIVASFVSGVDLSRQEKLLKDSLHPPRIVIGTPKRL 288
Query: 177 IDFLEKGTTNLQRCTYLVLDEADRMLIWDLNHKSEKSLS 293
+ +++ QR +V+DE D+ L+ S+K ++
Sbjct: 289 WEIVQEHEHLFQRTKRIVIDEVDKTLLPVHQRSSQKKIA 327
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +3
Query: 3 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 113
L+LAPTRELAQQI++ FG +R V GGA +
Sbjct: 182 LILAPTRELAQQIEEEILKFGRPLGIRTVSVIGGADR 218
Score = 35.9 bits (79), Expect = 0.031
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 24/65 (36%)
Frame = +2
Query: 251 VDMGFEPQIRKIIEQ-----IRPD-------------------RQTLMWSATWPKEVKKL 358
+DMGFEP+++KI+E ++PD RQT+M++AT P +V++L
Sbjct: 220 IDMGFEPEVQKILEHLPVSNVKPDSEDSEDPEHLLTHMGKDKYRQTVMFTATMPPQVERL 279
Query: 359 AEDYL 373
A++YL
Sbjct: 280 AKNYL 284
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = +3
Query: 93 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRM 251
+FGG + ++ L G E+++ATP + L++ T+L R ++V D+AD +
Sbjct: 298 IFGGGAEEDRIVPLINGCEVLVATPPCFLRMLKRCYTSLDRLCHVVFDDADML 350
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 38.7 bits (86), Expect = 0.004
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +3
Query: 3 LVLAPTRELAQQIQQVAADFGHTSYVR-NTCVFGGAPKREQARDLERGVEIVIATPGRLI 179
+V++PTRELAQQI + R + A + +I++ TP RL+
Sbjct: 209 VVVSPTRELAQQIYREFCHLAKGCAFRIHVLTKANASTNTFGAKSSKRFDILVTTPNRLV 268
Query: 180 DFL--EKGTTNLQRCTYLVLDEADRM 251
L E L +L+LDEAD++
Sbjct: 269 HLLTQEPPGIELHNVEWLILDEADKL 294
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/52 (26%), Positives = 30/52 (57%)
Frame = +1
Query: 529 IIFVETKRKAENISRNIRRYGWPAVCMPGDKTQQERDEVLYQFKEGRASILV 684
+IFV++K +A+ + + G + D+TQ +RD ++ F+ G+ +L+
Sbjct: 387 LIFVQSKDRAKELFHELIYDGINVDVIHSDRTQAQRDNIVKSFRTGKIWVLI 438
>SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 45
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 84 NTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG 197
+ C+ GG RE LE GV +V+ TPGR+ D + +G
Sbjct: 6 HACI-GGTNVREDRMKLEEGVHVVVGTPGRVFDMINRG 42
>SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27)
Length = 331
Score = 37.9 bits (84), Expect = 0.008
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Frame = +2
Query: 257 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 436
MGFE I I+ + R+T ++SAT EV+ L L + +++ + +L+ N+ +
Sbjct: 1 MGFEASINTILGYLPKQRRTGLFSATQTDEVEALVRAGLRNPVRVTVRE-KLTKTKNVQR 59
Query: 437 IVD-------ICQEHEKENKLNVLLQEIGQSKNLV 520
IC+ HEK ++L L+ KN+V
Sbjct: 60 TPSTLQNFYLICRSHEKFSQLVAFLKARKDKKNMV 94
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 37.1 bits (82), Expect = 0.013
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 144 VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 254
V+IV TPG+L DF+ +L + + +LDEAD +L
Sbjct: 136 VDIVTGTPGKLNDFITTDKISLHQVKFFILDEADGLL 172
>SB_55048| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 27
Score = 33.1 bits (72), Expect = 0.22
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +3
Query: 129 DLERGVEIVIATPGRLIDFL 188
+L+RG EI++ TPGR+ID L
Sbjct: 3 ELKRGAEIIVCTPGRMIDML 22
>SB_39160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 379
Score = 32.3 bits (70), Expect = 0.38
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +3
Query: 135 ERGVEIVIATPGRLIDFLEKGTTNLQ-RCTYLVLDEADRMLIWDLNHKSEKSLSKYAQTD 311
+RGV++ + P ++ D + T L+ RC Y+V D + W NH E +L+++ +
Sbjct: 79 KRGVKVDLGFPDQMWDTPDAEVTRLKNRCEYMVEQHEDDITEWYWNHPDE-NLTQWLCIE 137
Query: 312 RL 317
R+
Sbjct: 138 RV 139
>SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05)
Length = 584
Score = 31.9 bits (69), Expect = 0.50
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +1
Query: 529 IIFVETKRKAENISRNIRRYGWPAVCMPGDKTQQERDEVLYQFKEGRASILV 684
++F++TK A + + G A + G+ TQ +R E L +FK G ILV
Sbjct: 12 LVFLQTKWMAHKLRIVLGLMGLNADELHGNLTQLQRLEALQKFKNGEVDILV 63
>SB_11957| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 332
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +2
Query: 269 PQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNIL 433
P I K++E + W TW K +KL Y G+ + G +HN+L
Sbjct: 263 PCISKVVELRDQEFVIKWWKGTWLKSWEKLPSQYAGNSCVLFRGQYCQYRSHNLL 317
>SB_58000| Best HMM Match : MATH (HMM E-Value=1.1e-19)
Length = 1451
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +2
Query: 275 IRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQ-LSANHNILQIVDIC 451
+ K ++++R + QT S KEV + E + + I+ N G ++ LS H I
Sbjct: 1187 LHKELDKVRQELQTK--SCDHMKEVNAIREKH-DEAIRDNKGQIEALSKEHGIASNTI-- 1241
Query: 452 QEHEKENKLNVLLQEIGQSKNLVRK 526
HE + +L+ L +E+G + +RK
Sbjct: 1242 --HENKEQLDTLKKELGIASETIRK 1264
>SB_53656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 51
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 189 EKGTTNLQRCTYLVLDEADRML 254
E+ +N+Q YLV+DEADRM+
Sbjct: 2 EEHVSNVQLLRYLVIDEADRMV 23
>SB_44879| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 352
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = -2
Query: 289 NDFSDLWFKSHINIRSASSRTKYVHRCKLVVPFSKKSINLPGVAMTISTPLSKSRA 122
+D +WF + SSRTK + C+ + PF +++ + T S + +SR+
Sbjct: 60 SDVLTIWFYVGVQFYIMSSRTKGIFFCRYIWPFMSVPLSV-SIFTTSSMAVVRSRS 114
>SB_44274| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 924
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -2
Query: 646 ELHLFLVEFYRQACKQLASHISLCSLICSQLFSWFQQKLLFSHQ 515
+L++ +V+ Y Q +L H +LC L Q+ + LLF +Q
Sbjct: 66 KLNVAVVKKYEQRLSELKQHSNLCLLSKPQMMELKAEMLLFQNQ 109
>SB_47383| Best HMM Match : LON (HMM E-Value=1.3)
Length = 1528
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -2
Query: 310 SVWAYLLNDFSDLWFKSHINIRSASSRTKYVHRCKLVVPFSKKS 179
S + Y L++F DL FK+ + TK+ + C+L+V S++S
Sbjct: 411 SQYCYTLDEFEDLTFKT--SNTGCMYLTKFFNYCQLIVDKSQES 452
>SB_53758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1076
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -2
Query: 298 YLLNDFSDLWFKSHINIRSASSRTKYVHRCKLVVPFSKKS 179
YL F+D +FKSH+ + S + ++PFS +S
Sbjct: 891 YLQKKFNDPYFKSHLTMAKISGKLLTAVADSPLLPFSTRS 930
>SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29)
Length = 2072
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +2
Query: 341 KEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSKNLV 520
+E++KL+E Y GD ++ + + NH Q E+++ L +E GQ K+ V
Sbjct: 734 RELEKLSETYAGDRSRLLQDQKEATENHEQAMTE---QRQRLESQIEKLKEENGQMKSTV 790
>SB_47096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 407
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/67 (25%), Positives = 28/67 (41%)
Frame = -2
Query: 247 RSASSRTKYVHRCKLVVPFSKKSINLPGVAMTISTPLSKSRACSLLGAPPNTHVLRT*DV 68
+ S +T+ V C + K S+ + T LSKS+A G P + + V
Sbjct: 193 KEISKKTEQVRSCGIAAQMGKDSMGVIKNISTTGNDLSKSKAMRSKGGPDSKAPSKKATV 252
Query: 67 CPKSAAT 47
P +A +
Sbjct: 253 RPSTAGS 259
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,325,120
Number of Sequences: 59808
Number of extensions: 436986
Number of successful extensions: 1213
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1193
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1781448916
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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