Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0854
(543 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0364 - 2834446-2834742,2834838-2835197,2835281-2835562,283... 115 3e-26
10_08_0170 + 15397381-15397418,15397519-15397681,15398419-153986... 112 2e-25
08_02_0657 - 19749835-19751942,19753123-19753561 96 1e-20
05_03_0415 - 13661745-13664240,13664376-13664401,13665018-136650... 31 0.45
08_02_0113 - 12715888-12716181,12717443-12717602,12718327-127183... 29 2.4
06_01_0057 - 483710-484309 29 2.4
11_04_0301 + 16142236-16142945,16143748-16144247,16144557-161446... 28 4.2
04_01_0596 - 7852529-7855185,7855545-7855581 28 4.2
10_01_0140 - 1674305-1674586,1674683-1674838,1675676-1676622,167... 28 5.5
07_03_1644 - 28338535-28339103,28339512-28340326,28341104-283412... 27 7.3
04_04_0735 - 27667780-27667887,27668116-27668211,27668346-276684... 27 7.3
03_02_0401 - 8146758-8146912,8147151-8147235,8147502-8147567,814... 27 7.3
02_04_0279 + 21545317-21546192,21547331-21547667,21547795-21547931 27 7.3
02_03_0273 + 17173983-17174339,17174423-17174575,17174638-171747... 27 7.3
10_06_0002 + 9382559-9382937,9383008-9383180,9386752-9386901,938... 27 9.7
>03_01_0364 -
2834446-2834742,2834838-2835197,2835281-2835562,
2835634-2835705,2835798-2836019,2836105-2836871,
2837206-2837434,2838027-2838189,2838313-2838350
Length = 809
Score = 115 bits (276), Expect = 3e-26
Identities = 47/66 (71%), Positives = 59/66 (89%)
Frame = +3
Query: 309 SIAPCPSVRYGKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRA 488
S+ CP V+YGKRVHILPIDD+VEG+TGNLF+ +LKPYF+EAYRP+ + D F+VRGGMR+
Sbjct: 108 SVHQCPDVKYGKRVHILPIDDTVEGITGNLFDAFLKPYFLEAYRPLRKGDLFLVRGGMRS 167
Query: 489 VEFKVV 506
VEFKV+
Sbjct: 168 VEFKVI 173
Score = 110 bits (264), Expect = 8e-25
Identities = 50/79 (63%), Positives = 62/79 (78%)
Frame = +1
Query: 19 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 198
+D K D STAIL RK PNRL+V+EA +DDNSV+ + ME+LQLFRGDTVLLKGK+
Sbjct: 11 SDPKGKKDFSTAILERKKSPNRLVVDEATNDDNSVIGMHPDTMEKLQLFRGDTVLLKGKK 70
Query: 199 RKETVCIVLSDDNCPDEKI 255
RK+T+CIVL+DD C + KI
Sbjct: 71 RKDTICIVLADDTCEEPKI 89
>10_08_0170 +
15397381-15397418,15397519-15397681,15398419-15398647,
15398777-15399543,15399650-15399871,15399961-15400032,
15400100-15400408,15400491-15400850,15401199-15401492
Length = 817
Score = 112 bits (269), Expect = 2e-25
Identities = 53/79 (67%), Positives = 63/79 (79%)
Frame = +1
Query: 19 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 198
AD K D STAIL RK PNRL+V+EA +DDNSVVAL ME+LQLFRGDTVLLKGK+
Sbjct: 11 ADPKGKKDYSTAILERKKSPNRLVVDEATNDDNSVVALHPDTMERLQLFRGDTVLLKGKK 70
Query: 199 RKETVCIVLSDDNCPDEKI 255
RK+T+CIVL+D+ C + KI
Sbjct: 71 RKDTICIVLADETCEEPKI 89
Score = 112 bits (269), Expect = 2e-25
Identities = 46/66 (69%), Positives = 58/66 (87%)
Frame = +3
Query: 309 SIAPCPSVRYGKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRA 488
S+ C V+YGKRVHILPIDD+VEG+TGNLF+ +LKPYF+EAYRP+ + D F+VRGGMR+
Sbjct: 108 SVHQCQDVKYGKRVHILPIDDTVEGITGNLFDAFLKPYFLEAYRPVRKGDLFLVRGGMRS 167
Query: 489 VEFKVV 506
VEFKV+
Sbjct: 168 VEFKVI 173
>08_02_0657 - 19749835-19751942,19753123-19753561
Length = 848
Score = 96.3 bits (229), Expect = 1e-20
Identities = 40/66 (60%), Positives = 53/66 (80%)
Frame = +3
Query: 309 SIAPCPSVRYGKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRA 488
++ PCP++R KRV + P DDSVEG++G+LFE YLKPYFM+A RP+ + D F+VRG M A
Sbjct: 111 TVKPCPTIRNAKRVQLRPFDDSVEGISGDLFEPYLKPYFMDALRPVKKGDRFLVRGHMHA 170
Query: 489 VEFKVV 506
VEFKV+
Sbjct: 171 VEFKVM 176
Score = 78.2 bits (184), Expect = 4e-15
Identities = 39/77 (50%), Positives = 54/77 (70%), Gaps = 5/77 (6%)
Frame = +1
Query: 40 DLSTAILR--RKDRPNRLIVEEA---VSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRK 204
D STAIL +K PNRL+ ++A V+ DNS V LS+A ME+L +FRGD V L+G+RR+
Sbjct: 16 DYSTAILECAKKKSPNRLMADDAEGGVAVDNSTVTLSEATMEELGIFRGDLVTLRGRRRR 75
Query: 205 ETVCIVLSDDNCPDEKI 255
E VC D++CPD ++
Sbjct: 76 EAVCYAQKDESCPDGRL 92
>05_03_0415 -
13661745-13664240,13664376-13664401,13665018-13665035,
13665914-13666181,13666531-13666598,13667102-13667243
Length = 1005
Score = 31.5 bits (68), Expect = 0.45
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -2
Query: 320 RSDGYHIRKTHTKVVSHNTVHPIFSSGQLSSESTMQTVSLRRLPLSKTVSPR 165
R+D + +TK + N I +SG LS + + +VSL LP +SPR
Sbjct: 153 RADAWRTVFVNTKAMLLNLPKAIIASGLLSLPTPLLSVSLPALPSEPFISPR 204
>08_02_0113 - 12715888-12716181,12717443-12717602,12718327-12718368,
12718443-12718465,12718616-12720653,12720736-12720965,
12722207-12722329,12722438-12723010,12724684-12724733,
12726828-12726923,12726987-12727394,12727609-12727795
Length = 1407
Score = 29.1 bits (62), Expect = 2.4
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +1
Query: 454 TTPSWSAGACAPSSSKWSHRSITIL 528
++P W +CAP WS R+ I+
Sbjct: 1324 SSPPWMLASCAPGDDAWSRRATVIV 1348
>06_01_0057 - 483710-484309
Length = 199
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +2
Query: 44 YRPRSSVARTDPTVSLSKKQSAMTTQS-WHFHRPKWSNFNSSVVTQSCSR 190
Y P ART P ++ + A S W F WS+ S V+T+ SR
Sbjct: 62 YFPLGPAARTSPAGTVLCFEDARGGDSTWRFRYSYWSSSQSYVITKGWSR 111
>11_04_0301 +
16142236-16142945,16143748-16144247,16144557-16144649,
16144879-16145005,16145265-16145468,16145587-16145692
Length = 579
Score = 28.3 bits (60), Expect = 4.2
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
Frame = +2
Query: 155 FNSSVVTQSCSRANAARKPFA----SCSQTIIALMRKSDEP---CCEKQPSC 289
+NSS + SC+ A ++PF SC+ ++ L R+ P CC +C
Sbjct: 475 YNSSRLLYSCTAREAEQQPFGCLTDSCTDSLTVLKRRFLTPFLLCCHTALNC 526
>04_01_0596 - 7852529-7855185,7855545-7855581
Length = 897
Score = 28.3 bits (60), Expect = 4.2
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = -2
Query: 275 SHNTVHPI----FSSGQLSSESTMQTVSLRRLPLSKTVSPR 165
S NTVH I +SG LS + + +VSL LP +SPR
Sbjct: 56 SANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPR 96
>10_01_0140 -
1674305-1674586,1674683-1674838,1675676-1676622,
1678976-1679054,1679168-1679207,1679580-1679767,
1679869-1680024,1680752-1681713,1681866-1681914
Length = 952
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 178 VLLKGKRRKETVCIVLSDDNCPDEKIG*TVL*ETTFVCVFL 300
V L+ R E + ++L++DNC ++ L E +F C L
Sbjct: 842 VFLQNSPRLEKLTLILAEDNCKTSEVFIGELEEKSFTCEHL 882
>07_03_1644 -
28338535-28339103,28339512-28340326,28341104-28341205,
28342469-28342594,28342782-28343071
Length = 633
Score = 27.5 bits (58), Expect = 7.3
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 470 DHEGVVTMDRTVSLHEVRLQVYFE 399
DHE V+ D+ VSL +V++ Y+E
Sbjct: 414 DHEEVIENDKLVSLVDVKVGCYYE 437
>04_04_0735 -
27667780-27667887,27668116-27668211,27668346-27668455,
27668545-27668648,27669279-27669556
Length = 231
Score = 27.5 bits (58), Expect = 7.3
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +3
Query: 330 VRYGKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVA 509
+ G+ V + + V+ T + L ++ Y P+ +DD F+VR M+ V+ K V
Sbjct: 125 IHSGRDVFLENVGVGVDYWTSTGNALALSELNLKFYTPLRKDDRFVVR--MKVVKIKGVR 182
Query: 510 QIHHHFASWL 539
I H L
Sbjct: 183 IIVEHLIETL 192
>03_02_0401 -
8146758-8146912,8147151-8147235,8147502-8147567,
8147744-8147802,8147911-8148013,8148227-8148358,
8148447-8148527,8148729-8148821,8148978-8149061,
8149242-8149300,8149405-8149481,8149639-8149789,
8150302-8150437
Length = 426
Score = 27.5 bits (58), Expect = 7.3
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 429 EAYRPIHRDDTFMVRGGMRAVE 494
+AYRP H D T+ + G+RAV+
Sbjct: 148 KAYRPSHADATYDFKYGVRAVQ 169
>02_04_0279 + 21545317-21546192,21547331-21547667,21547795-21547931
Length = 449
Score = 27.5 bits (58), Expect = 7.3
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 457 TPSWSAGACAPSSSKWSHRS 516
+P WSA ACA + W++R+
Sbjct: 180 SPWWSAAACAVEVASWAYRT 199
>02_03_0273 + 17173983-17174339,17174423-17174575,17174638-17174700,
17174943-17175026,17175120-17175242,17175466-17175519,
17175669-17175764,17176163-17176258,17177179-17177324,
17178503-17178632,17178697-17179272,17179364-17179462,
17179535-17179687,17179794-17180558,17181384-17181683
Length = 1064
Score = 27.5 bits (58), Expect = 7.3
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +1
Query: 10 NKMADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQL-QLFRGDTVLL 186
+ MA + P +L AI DRP +EEA D +S+V ++++ L + R + L
Sbjct: 766 SSMALCRPPVELVQAISTVSDRPTISALEEAGDDGHSIVDAAESRWITLTEELRVE--LE 823
Query: 187 KGKRRKETVCI-VLSDDNCPDEKIG 258
K K E + + V S+ C +E G
Sbjct: 824 KSKSLSERLQLEVESEKQCSEELKG 848
>10_06_0002 + 9382559-9382937,9383008-9383180,9386752-9386901,
9387180-9387325,9387416-9387572,9387720-9387778,
9388204-9388360,9389001-9389150,9389280-9389416,
9390071-9390217,9390292-9390393,9390742-9390799,
9391997-9392034,9392124-9392250,9392320-9392493,
9393125-9393256,9393940-9394049,9394752-9394812,
9395036-9395213,9395326-9395531,9395796-9395915,
9396496-9396594,9396983-9397204,9397482-9397621,
9397741-9397852,9398021-9398071,9398151-9398240,
9398397-9398567,9398663-9398815,9399774-9399950,
9400045-9400182,9400295-9400365,9400739-9400838,
9401324-9401380,9401469-9401525,9401619-9401699,
9401782-9401864,9401975-9402110
Length = 1632
Score = 27.1 bits (57), Expect = 9.7
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 125 WHFHRPKWSNFNSSVVTQSCSRANAARKPFASCSQTIIALMRKS 256
W HR + +++++ QSC R AR F+ + AL+ +S
Sbjct: 905 WRLHRTYQQSHSAALLIQSCIRGFIARHYFSVIKEQKAALVIQS 948
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,139,692
Number of Sequences: 37544
Number of extensions: 329928
Number of successful extensions: 953
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 953
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1210221432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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