Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0854
         (543 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    28   0.17 
AF513638-1|AAM53610.1|  210|Anopheles gambiae glutathione S-tran...    27   0.40 
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    25   1.6  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    25   2.1  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    23   4.9  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   6.5  

>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 28.3 bits (60), Expect = 0.17
 Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
 Frame = +1

Query: 463 SWSAGACAPSSSK---WSHRSITILH 531
           +W A A AP++S+   W+HR I  LH
Sbjct: 886 AWDAAAAAPTASRYAVWAHRMIPDLH 911


>AF513638-1|AAM53610.1|  210|Anopheles gambiae glutathione
           S-transferase D3 protein.
          Length = 210

 Score = 27.1 bits (57), Expect = 0.40
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -2

Query: 542 QEPRCKMVMDLCDHFELDGAHAPADH 465
           Q  + K  MDL +HF  + ++A ADH
Sbjct: 124 QMEKLKKAMDLLEHFLTERSYAAADH 149


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +2

Query: 41  IYRPRSSVARTDPTVSLSKKQSAMTTQSW 127
           +Y+  S+V RTD   ++ K++   T + W
Sbjct: 849 VYQRLSAVNRTDTRANIRKQERQATIEQW 877



 Score = 22.6 bits (46), Expect = 8.6
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 336 ISLKDTERWIPHQKDAHE 283
           ++L+D   W+PH K+  E
Sbjct: 735 VTLQDKLSWLPHVKEVTE 752


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -1

Query: 381 PQLNHQLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSS 256
           P L    ++  L+ H  L+     IP+  D H+G  S H SS
Sbjct: 673 PSLKEDNSLLSLIGHFFLQTP---IPNNGDVHQGGDSNHTSS 711


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 327 KDTERWIPHQKDAHEG 280
           K+T RW+  ++D  EG
Sbjct: 124 KETARWVKFEEDVEEG 139


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
            transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 29   KALMIYRPRSSVARTDPTVSLS 94
            + L + +PRSS  R+DP   +S
Sbjct: 998  ETLRLAQPRSSAGRSDPMFRMS 1019


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 596,388
Number of Sequences: 2352
Number of extensions: 11464
Number of successful extensions: 28
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)