Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0854
(543 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing prot... 127 3e-29
BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing prot... 127 3e-29
AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing prot... 127 3e-29
AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmi... 127 3e-29
AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein. 127 3e-29
AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing prot... 125 1e-28
>BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 127 bits (306), Expect = 3e-29
Identities = 60/79 (75%), Positives = 73/79 (92%)
Frame = +1
Query: 19 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 198
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 199 RKETVCIVLSDDNCPDEKI 255
R+E VCIVLSDD C DEKI
Sbjct: 64 RREAVCIVLSDDTCSDEKI 82
Score = 125 bits (301), Expect = 1e-28
Identities = 53/66 (80%), Positives = 61/66 (92%)
Frame = +3
Query: 309 SIAPCPSVRYGKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRA 488
SI PCP V+YGKR+H+LPIDD+VEG+TGNLFEVYLKPYF+EAYRPI + D F+VRGGMRA
Sbjct: 101 SIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRA 160
Query: 489 VEFKVV 506
VEFKVV
Sbjct: 161 VEFKVV 166
>BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 127 bits (306), Expect = 3e-29
Identities = 60/79 (75%), Positives = 73/79 (92%)
Frame = +1
Query: 19 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 198
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 199 RKETVCIVLSDDNCPDEKI 255
R+E VCIVLSDD C DEKI
Sbjct: 64 RREAVCIVLSDDTCSDEKI 82
Score = 125 bits (301), Expect = 1e-28
Identities = 53/66 (80%), Positives = 61/66 (92%)
Frame = +3
Query: 309 SIAPCPSVRYGKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRA 488
SI PCP V+YGKR+H+LPIDD+VEG+TGNLFEVYLKPYF+EAYRPI + D F+VRGGMRA
Sbjct: 101 SIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRA 160
Query: 489 VEFKVV 506
VEFKVV
Sbjct: 161 VEFKVV 166
>AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 127 bits (306), Expect = 3e-29
Identities = 60/79 (75%), Positives = 73/79 (92%)
Frame = +1
Query: 19 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 198
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 199 RKETVCIVLSDDNCPDEKI 255
R+E VCIVLSDD C DEKI
Sbjct: 64 RREAVCIVLSDDTCSDEKI 82
Score = 125 bits (301), Expect = 1e-28
Identities = 53/66 (80%), Positives = 61/66 (92%)
Frame = +3
Query: 309 SIAPCPSVRYGKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRA 488
SI PCP V+YGKR+H+LPIDD+VEG+TGNLFEVYLKPYF+EAYRPI + D F+VRGGMRA
Sbjct: 101 SIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRA 160
Query: 489 VEFKVV 506
VEFKVV
Sbjct: 161 VEFKVV 166
>AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmic
reticulum ATPase protein.
Length = 806
Score = 127 bits (306), Expect = 3e-29
Identities = 60/79 (75%), Positives = 73/79 (92%)
Frame = +1
Query: 19 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 198
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 199 RKETVCIVLSDDNCPDEKI 255
R+E VCIVLSDD C DEKI
Sbjct: 64 RREAVCIVLSDDTCSDEKI 82
Score = 125 bits (301), Expect = 1e-28
Identities = 53/66 (80%), Positives = 61/66 (92%)
Frame = +3
Query: 309 SIAPCPSVRYGKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRA 488
SI PCP V+YGKR+H+LPIDD+VEG+TGNLFEVYLKPYF+EAYRPI + D F+VRGGMRA
Sbjct: 101 SIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRA 160
Query: 489 VEFKVV 506
VEFKVV
Sbjct: 161 VEFKVV 166
>AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein.
Length = 806
Score = 127 bits (306), Expect = 3e-29
Identities = 60/79 (75%), Positives = 73/79 (92%)
Frame = +1
Query: 19 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 198
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 199 RKETVCIVLSDDNCPDEKI 255
R+E VCIVLSDD C DEKI
Sbjct: 64 RREAVCIVLSDDTCSDEKI 82
Score = 125 bits (301), Expect = 1e-28
Identities = 53/66 (80%), Positives = 61/66 (92%)
Frame = +3
Query: 309 SIAPCPSVRYGKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRA 488
SI PCP V+YGKR+H+LPIDD+VEG+TGNLFEVYLKPYF+EAYRPI + D F+VRGGMRA
Sbjct: 101 SIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRA 160
Query: 489 VEFKVV 506
VEFKVV
Sbjct: 161 VEFKVV 166
>AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing protein
protein.
Length = 307
Score = 125 bits (301), Expect = 1e-28
Identities = 53/66 (80%), Positives = 61/66 (92%)
Frame = +3
Query: 309 SIAPCPSVRYGKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRA 488
SI PCP V+YGKR+H+LPIDD+VEG+TGNLFEVYLKPYF+EAYRPI + D F+VRGGMRA
Sbjct: 39 SIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRA 98
Query: 489 VEFKVV 506
VEFKVV
Sbjct: 99 VEFKVV 104
Score = 34.7 bits (76), Expect = 0.21
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +1
Query: 202 KETVCIVLSDDNCPDEKI 255
+E VCIVLSDD C DEKI
Sbjct: 3 REAVCIVLSDDTCSDEKI 20
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,515,641
Number of Sequences: 237096
Number of extensions: 1709403
Number of successful extensions: 4122
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4122
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5308067764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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