Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0854
(543 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 109 1e-24
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 108 2e-24
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 108 2e-24
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr... 29 1.6
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein... 29 1.6
Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical pr... 28 5.0
AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1 ... 28 5.0
Z70783-11|CAA94860.2| 782|Caenorhabditis elegans Hypothetical p... 27 8.7
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 109 bits (262), Expect = 1e-24
Identities = 48/76 (63%), Positives = 67/76 (88%)
Frame = +1
Query: 28 KSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKE 207
K D+LSTAIL+ K +PNRLIV+++ DDNSV+A+SQAKM++L LFRGD V+LKGK+RKE
Sbjct: 13 KKNDELSTAILKDKVKPNRLIVDQSEQDDNSVIAVSQAKMDELGLFRGDAVILKGKKRKE 72
Query: 208 TVCIVLSDDNCPDEKI 255
+V I++SD++CP+EK+
Sbjct: 73 SVAIIVSDESCPNEKV 88
Score = 108 bits (259), Expect = 3e-24
Identities = 44/66 (66%), Positives = 56/66 (84%)
Frame = +3
Query: 309 SIAPCPSVRYGKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRA 488
SI P P++ YG R+H+LPIDD++EGLTGNLF+V+LKPYF+EAYRP+H+ D F V+ MR
Sbjct: 107 SITPAPNLSYGTRIHVLPIDDTIEGLTGNLFDVFLKPYFLEAYRPLHKGDIFTVQAAMRT 166
Query: 489 VEFKVV 506
VEFKVV
Sbjct: 167 VEFKVV 172
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 108 bits (260), Expect = 2e-24
Identities = 49/76 (64%), Positives = 67/76 (88%)
Frame = +1
Query: 28 KSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKE 207
K D+L+TAIL+ K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+LKGK+R+E
Sbjct: 13 KKNDELATAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRE 72
Query: 208 TVCIVLSDDNCPDEKI 255
TV IVL+ DNCP++KI
Sbjct: 73 TVSIVLNADNCPNDKI 88
Score = 99.1 bits (236), Expect = 2e-21
Identities = 40/59 (67%), Positives = 51/59 (86%)
Frame = +3
Query: 330 VRYGKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVV 506
+ YGKRVH+LPIDD++EGLTGNLF+V+L+PYF +AYRP+H+ D F V+ MR VEFKVV
Sbjct: 113 LEYGKRVHVLPIDDTIEGLTGNLFDVFLRPYFTDAYRPVHKGDIFTVQAAMRTVEFKVV 171
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 108 bits (260), Expect = 2e-24
Identities = 49/76 (64%), Positives = 67/76 (88%)
Frame = +1
Query: 28 KSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKE 207
K D+L+TAIL+ K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+LKGK+R+E
Sbjct: 13 KKNDELATAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRE 72
Query: 208 TVCIVLSDDNCPDEKI 255
TV IVL+ DNCP++KI
Sbjct: 73 TVSIVLNADNCPNDKI 88
Score = 99.1 bits (236), Expect = 2e-21
Identities = 40/59 (67%), Positives = 51/59 (86%)
Frame = +3
Query: 330 VRYGKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVV 506
+ YGKRVH+LPIDD++EGLTGNLF+V+L+PYF +AYRP+H+ D F V+ MR VEFKVV
Sbjct: 113 LEYGKRVHVLPIDDTIEGLTGNLFDVFLRPYFTDAYRPVHKGDIFTVQAAMRTVEFKVV 171
>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical
protein C10C6.1 protein.
Length = 1565
Score = 29.5 bits (63), Expect = 1.6
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +2
Query: 17 WQIIKALMIYRPRSSVARTDPTVSLSKKQSAMT-TQSWHFHRPKWSNFNSSVVTQSCSRA 193
W + R RSS+ +DP +S S S T T S H + SS T S +R
Sbjct: 56 WTSASMTNLCRVRSSLGHSDPQLSSSSTNSFNTSTSSLHPATKSSTTALSSFSTSSANR- 114
Query: 194 NAARKPFASCSQTIIALMR 250
+ A +P S + + L R
Sbjct: 115 SPANRPSLHSSTSPVTLQR 133
>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
protein.
Length = 1565
Score = 29.5 bits (63), Expect = 1.6
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +2
Query: 17 WQIIKALMIYRPRSSVARTDPTVSLSKKQSAMT-TQSWHFHRPKWSNFNSSVVTQSCSRA 193
W + R RSS+ +DP +S S S T T S H + SS T S +R
Sbjct: 56 WTSASMTNLCRVRSSLGHSDPQLSSSSTNSFNTSTSSLHPATKSSTTALSSFSTSSANR- 114
Query: 194 NAARKPFASCSQTIIALMR 250
+ A +P S + + L R
Sbjct: 115 SPANRPSLHSSTSPVTLQR 133
>Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical
protein F42E11.4 protein.
Length = 250
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +1
Query: 7 LNKMADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQL 156
L K+ NK+ +DL T LR++ +++ E V+ N AK+E +
Sbjct: 61 LRKLLMNKAAEDLKTQQLRKEQERVKVLAERTVALPNVDSIDDHAKLEAI 110
>AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1
protein.
Length = 250
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +1
Query: 7 LNKMADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQL 156
L K+ NK+ +DL T LR++ +++ E V+ N AK+E +
Sbjct: 61 LRKLLMNKAAEDLKTQQLRKEQERVKVLAERTVALPNVDSIDDHAKLEAI 110
>Z70783-11|CAA94860.2| 782|Caenorhabditis elegans Hypothetical
protein ZK856.12 protein.
Length = 782
Score = 27.1 bits (57), Expect = 8.7
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +1
Query: 97 EAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDD---NCPD 246
+++SDD A + + ++ G + K K K CI+LS+D N PD
Sbjct: 120 KSLSDDMERAAATFRNPHESEIVPGAMYIFKQKHGKAYRCIILSEDGDMNIPD 172
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,188,394
Number of Sequences: 27780
Number of extensions: 267722
Number of successful extensions: 704
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 704
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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