Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0853
(767 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 120 4e-26
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 105 1e-21
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 103 5e-21
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 98 2e-19
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 97 6e-19
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 97 6e-19
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 95 2e-18
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 94 3e-18
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 94 4e-18
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 93 7e-18
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 93 9e-18
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 91 3e-17
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 90 6e-17
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 89 1e-16
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 88 3e-16
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 86 8e-16
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 86 1e-15
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 85 1e-15
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 85 2e-15
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 84 3e-15
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 84 3e-15
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 82 2e-14
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 79 2e-13
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 78 2e-13
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 78 2e-13
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 78 3e-13
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 77 4e-13
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 76 1e-12
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 74 3e-12
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 71 2e-11
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 71 2e-11
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 70 6e-11
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 69 1e-10
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 69 2e-10
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 69 2e-10
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 65 2e-09
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 64 4e-09
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 64 4e-09
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 63 8e-09
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 63 8e-09
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 62 1e-08
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 60 4e-08
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 60 4e-08
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 60 6e-08
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 60 8e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 1e-07
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 59 1e-07
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 58 2e-07
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 58 2e-07
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 58 3e-07
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 57 4e-07
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 57 6e-07
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 56 7e-07
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 56 1e-06
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 56 1e-06
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 56 1e-06
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 55 2e-06
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 55 2e-06
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 54 3e-06
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 54 5e-06
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 54 5e-06
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 53 7e-06
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 53 7e-06
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 53 7e-06
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 52 1e-05
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 52 2e-05
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 52 2e-05
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 52 2e-05
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 50 5e-05
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 50 5e-05
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 50 6e-05
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 50 6e-05
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 50 8e-05
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 49 1e-04
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 48 2e-04
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 48 2e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 3e-04
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 48 3e-04
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 47 6e-04
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 46 8e-04
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 46 8e-04
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 44 0.004
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 44 0.006
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 43 0.010
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 43 0.010
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 42 0.013
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 42 0.022
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 41 0.029
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 41 0.039
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 40 0.051
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 39 0.12
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 38 0.21
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 37 0.63
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 37 0.63
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 36 1.1
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 35 1.9
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 34 3.4
UniRef50_Q7RMW2 Cluster: Phosphatase-related; n=2; Plasmodium (V... 34 4.5
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 33 7.8
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 120 bits (289), Expect = 4e-26
Identities = 61/85 (71%), Positives = 65/85 (76%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 689
LFV AVGITAF AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHP+
Sbjct: 180 LFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPK 239
Query: 690 VYI*FYQDLV*FLILFHKKEEKKKL 764
+ F QDLV F +LF KK EK KL
Sbjct: 240 LMFSFSQDLVSFHMLFPKKVEKSKL 264
Score = 111 bits (267), Expect = 2e-23
Identities = 72/171 (42%), Positives = 74/171 (43%), Gaps = 1/171 (0%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYN-IXXXXXXXXXXXXXX 177
HKDIGTLY AELG PGSLIGDDQIYN I
Sbjct: 9 HKDIGTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVM 68
Query: 178 XXXXWRIWKLXXXXXXXXXXXXXPTKNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 357
P NN+ F IVENGAGTG TVYPP
Sbjct: 69 PIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPP 128
Query: 358 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 510
LSSNIAH G SVDLAIFSLHLAGISS SFDQ+P
Sbjct: 129 LSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNLSFDQMP 179
Score = 37.5 bits (83), Expect = 0.36
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = +2
Query: 200 GN*LVPLILGAPDIAFPRKII*DFDSYPPPL 292
GN LVPL+LGAPD+AFPR F PP L
Sbjct: 76 GNWLVPLMLGAPDMAFPRMNNMSFWLLPPSL 106
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 105 bits (252), Expect = 1e-21
Identities = 64/140 (45%), Positives = 75/140 (53%)
Frame = -1
Query: 434 DEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQNLILF 255
+E PAKC+EKI STD P CAI SGG TVHPVP P STI L + ++EGG +QNL+LF
Sbjct: 78 EETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNLMLF 137
Query: 254 FVGMXXXXXXXXXXLINFQILQL**V*L*KKL**KHVXXXXXXXXXXXINDPGFPNSARI 75
G F + KK+ K I PG PNSARI
Sbjct: 138 IRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTLIWSFPIKLPGCPNSARI 197
Query: 74 KSLKDVPIIPDQIPKIKYNV 15
KSL DVP +P PK+KYNV
Sbjct: 198 KSLSDVPTMPAHAPKMKYNV 217
Score = 74.9 bits (176), Expect = 2e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = -2
Query: 667 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKVIDQM 494
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN + M
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSM 57
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/52 (48%), Positives = 29/52 (55%)
Frame = -3
Query: 291 KGGG*ESKSYIIFRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVT 136
K GG + RGNA+SGAP++ GTNQFPNPP KA AVT
Sbjct: 126 KEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVT 177
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 103 bits (247), Expect = 5e-21
Identities = 49/63 (77%), Positives = 51/63 (80%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 689
LF+ AVGITA AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHPE
Sbjct: 156 LFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPE 215
Query: 690 VYI 698
VYI
Sbjct: 216 VYI 218
Score = 99.5 bits (237), Expect = 8e-20
Identities = 63/143 (44%), Positives = 65/143 (45%), Gaps = 1/143 (0%)
Frame = +1
Query: 85 ELGNPGSLIGDDQIYN-IXXXXXXXXXXXXXXXXXXWRIWKLXXXXXXXXXXXXXPTKNN 261
ELG PGSLIGDDQIYN I P NN
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 262 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 441
+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS
Sbjct: 73 MSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSIL 132
Query: 442 XXXXXXXXXXXXXXXXXSFDQLP 510
SFDQ+P
Sbjct: 133 GAINFITTIINMRINKMSFDQMP 155
Score = 37.1 bits (82), Expect = 0.48
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +2
Query: 200 GN*LVPLILGAPDIAFPRKII*DFDSYPPPL 292
GN L+PL+LGAPD+AFPR F PP L
Sbjct: 52 GNWLIPLMLGAPDMAFPRMNNMSFWLLPPSL 82
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 97.9 bits (233), Expect = 2e-19
Identities = 46/63 (73%), Positives = 50/63 (79%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 689
LFV +V +TAF AGAIT+LLTDRN NT+FFDPAGGGDPILYQHLF FFGHPE
Sbjct: 186 LFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPE 245
Query: 690 VYI 698
VYI
Sbjct: 246 VYI 248
Score = 71.3 bits (167), Expect = 2e-11
Identities = 50/148 (33%), Positives = 59/148 (39%), Gaps = 3/148 (2%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNIXXXXXXXXXXXXX 174
HKDIGTLY EL PG I G+ Q+YN+
Sbjct: 13 HKDIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFM 72
Query: 175 XXXXX-WRIWKLXXXXXXXXXXXXXPTKNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVY 351
P NNI F +VE G+GTG TVY
Sbjct: 73 VMPAMIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVY 132
Query: 352 PPLSSNIAHRGRSVDLAIFSLHLAGISS 435
PPLS +H G +VDLAIFSLHL+G+SS
Sbjct: 133 PPLSGITSHSGGAVDLAIFSLHLSGVSS 160
Score = 34.3 bits (75), Expect = 3.4
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +2
Query: 200 GN*LVPLILGAPDIAFPRKII*DFDSYPPPL 292
GN VP+++GAPD+AFPR F PP L
Sbjct: 82 GNWFVPILIGAPDMAFPRLNNISFWLLPPSL 112
Score = 33.9 bits (74), Expect = 4.5
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +2
Query: 698 LILPGFGIISHIISQERGK 754
LILPGFGIISHI+S GK
Sbjct: 249 LILPGFGIISHIVSTFSGK 267
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 96.7 bits (230), Expect = 6e-19
Identities = 61/146 (41%), Positives = 66/146 (45%), Gaps = 1/146 (0%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYN-IXXXXXXXXXXXXXX 177
HKDIGTLY AELG PG+L+GDDQIYN I
Sbjct: 13 HKDIGTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVM 72
Query: 178 XXXXWRIWKLXXXXXXXXXXXXXPTKNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 357
P NN+ F VE GAGTG TVYPP
Sbjct: 73 PIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPP 132
Query: 358 LSSNIAHRGRSVDLAIFSLHLAGISS 435
L+ N+AH G SVDLAIFSLHLAGISS
Sbjct: 133 LAGNLAHAGASVDLAIFSLHLAGISS 158
Score = 93.1 bits (221), Expect = 7e-18
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 689
LFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPE
Sbjct: 184 LFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPE 243
Query: 690 VYI 698
VYI
Sbjct: 244 VYI 246
Score = 35.5 bits (78), Expect = 1.5
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +2
Query: 200 GN*LVPLILGAPDIAFPRKII*DFDSYPP 286
GN LVPL++GAPD+AFPR F PP
Sbjct: 80 GNWLVPLMIGAPDMAFPRMNNMSFWLXPP 108
Score = 35.5 bits (78), Expect = 1.5
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +2
Query: 698 LILPGFGIISHIISQERGKKE 760
LILPGFG+ISH+++ GKKE
Sbjct: 247 LILPGFGMISHVVTYYAGKKE 267
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 96.7 bits (230), Expect = 6e-19
Identities = 45/63 (71%), Positives = 49/63 (77%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 689
LFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF FFGHPE
Sbjct: 183 LFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHPE 242
Query: 690 VYI 698
VYI
Sbjct: 243 VYI 245
Score = 71.3 bits (167), Expect = 2e-11
Identities = 54/147 (36%), Positives = 57/147 (38%), Gaps = 3/147 (2%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYN-IXXXXXXXXXXXXX 174
KDIGTLY EL PG L GD Q+YN I
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 175 XXXXXWRIWKLXXXXXXXXXXXXXPTKNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 354
P NNI F VE GAGTG TVYP
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYP 130
Query: 355 PLSSNIAHRGRSVDLAIFSLHLAGISS 435
PLS +H G SVDLAIFSLHL+GISS
Sbjct: 131 PLSGLQSHSGGSVDLAIFSLHLSGISS 157
Score = 35.1 bits (77), Expect = 1.9
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +2
Query: 200 GN*LVPLILGAPDIAFPRKII*DFDSYPPPL 292
GN LVP+++GAPD+AFPR F PP L
Sbjct: 79 GNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 94.7 bits (225), Expect = 2e-18
Identities = 45/63 (71%), Positives = 49/63 (77%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 689
LF +V ITA AGAIT+LLTDRN+NTSFFDP+GGGDPILYQHLF FFGHPE
Sbjct: 167 LFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFFGHPE 226
Query: 690 VYI 698
VYI
Sbjct: 227 VYI 229
Score = 70.9 bits (166), Expect = 3e-11
Identities = 46/118 (38%), Positives = 50/118 (42%), Gaps = 1/118 (0%)
Frame = +1
Query: 85 ELGNPGSLIGDDQIYN-IXXXXXXXXXXXXXXXXXXWRIWKLXXXXXXXXXXXXXPTKNN 261
ELG PGSLIG+DQIYN I P NN
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRMNN 83
Query: 262 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 435
+ F + G GTG TVYPPLS + H G SVDL IFSLHLAG SS
Sbjct: 84 MSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASS 141
Score = 40.3 bits (90), Expect = 0.051
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +2
Query: 698 LILPGFGIISHIISQERGKKET 763
LILPGFGIISH+I E GKKET
Sbjct: 230 LILPGFGIISHMIFNESGKKET 251
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 94.3 bits (224), Expect = 3e-18
Identities = 44/63 (69%), Positives = 49/63 (77%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 689
LFV ++ +TAF AGAIT+LLTDRN NTSFFD +GGGDPILYQHLF FFGHPE
Sbjct: 191 LFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFFGHPE 250
Query: 690 VYI 698
VYI
Sbjct: 251 VYI 253
Score = 69.7 bits (163), Expect = 7e-11
Identities = 50/148 (33%), Positives = 59/148 (39%), Gaps = 3/148 (2%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNIXXXXXXXXXXXXX 174
HKDIGTLY EL P + L+G+ QIYN+
Sbjct: 18 HKDIGTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFM 77
Query: 175 XXXXX-WRIWKLXXXXXXXXXXXXXPTKNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVY 351
P NNI F +VE G GTG TVY
Sbjct: 78 VMPVMIGGFGNWLVPIMIGSPDMAFPRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVY 137
Query: 352 PPLSSNIAHRGRSVDLAIFSLHLAGISS 435
PPLSS +H G +VDLAIFSLH++G SS
Sbjct: 138 PPLSSIQSHSGGAVDLAIFSLHISGASS 165
Score = 34.3 bits (75), Expect = 3.4
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +2
Query: 200 GN*LVPLILGAPDIAFPRKII*DFDSYPPPL 292
GN LVP+++G+PD+AFPR F PP L
Sbjct: 87 GNWLVPIMIGSPDMAFPRLNNISFWLLPPSL 117
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 93.9 bits (223), Expect = 4e-18
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 689
LFV AV +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPE
Sbjct: 183 LFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPE 242
Query: 690 VYI 698
VYI
Sbjct: 243 VYI 245
Score = 91.1 bits (216), Expect = 3e-17
Identities = 57/146 (39%), Positives = 63/146 (43%), Gaps = 1/146 (0%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYN-IXXXXXXXXXXXXXX 177
HKDIGTLY AEL PG+L+GDDQIYN I
Sbjct: 12 HKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVM 71
Query: 178 XXXXWRIWKLXXXXXXXXXXXXXPTKNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 357
P NN+ F VE GAGTG TVYPP
Sbjct: 72 PILIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPP 131
Query: 358 LSSNIAHRGRSVDLAIFSLHLAGISS 435
L+ N+AH G SVDL IFSLHLAG+SS
Sbjct: 132 LAGNLAHAGASVDLTIFSLHLAGVSS 157
Score = 36.7 bits (81), Expect = 0.63
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +2
Query: 698 LILPGFGIISHIISQERGKKE 760
LILPGFGIISH+++ GKKE
Sbjct: 246 LILPGFGIISHVVAYYAGKKE 266
Score = 35.5 bits (78), Expect = 1.5
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +2
Query: 200 GN*LVPLILGAPDIAFPRKII*DFDSYPP 286
GN LVPL++GAPD+AFPR F PP
Sbjct: 79 GNWLVPLMIGAPDMAFPRMNNMSFWLLPP 107
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 93.1 bits (221), Expect = 7e-18
Identities = 45/63 (71%), Positives = 48/63 (76%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 689
LFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPE
Sbjct: 183 LFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPE 242
Query: 690 VYI 698
VYI
Sbjct: 243 VYI 245
Score = 88.6 bits (210), Expect = 1e-16
Identities = 55/146 (37%), Positives = 63/146 (43%), Gaps = 1/146 (0%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYN-IXXXXXXXXXXXXXX 177
HKDIGTLY AELG PG+L+G+D IYN I
Sbjct: 12 HKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVM 71
Query: 178 XXXXWRIWKLXXXXXXXXXXXXXPTKNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 357
P NN+ F +VE GAGTG TVYPP
Sbjct: 72 PIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPP 131
Query: 358 LSSNIAHRGRSVDLAIFSLHLAGISS 435
L+ N +H G SVDL IFSLHLAG+SS
Sbjct: 132 LAGNYSHPGASVDLTIFSLHLAGVSS 157
Score = 36.7 bits (81), Expect = 0.63
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +2
Query: 200 GN*LVPLILGAPDIAFPRKII*DFDSYPPPL 292
GN LVPL++GAPD+AFPR F PP L
Sbjct: 79 GNWLVPLMIGAPDMAFPRMNNMSFWLLPPSL 109
Score = 35.9 bits (79), Expect = 1.1
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +2
Query: 698 LILPGFGIISHIISQERGKKE 760
LILPGFG+ISHI++ GKKE
Sbjct: 246 LILPGFGMISHIVTYYSGKKE 266
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 92.7 bits (220), Expect = 9e-18
Identities = 44/63 (69%), Positives = 48/63 (76%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 689
LFV +V +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPE
Sbjct: 183 LFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPE 242
Query: 690 VYI 698
VYI
Sbjct: 243 VYI 245
Score = 91.1 bits (216), Expect = 3e-17
Identities = 57/146 (39%), Positives = 63/146 (43%), Gaps = 1/146 (0%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYN-IXXXXXXXXXXXXXX 177
HKDIGTLY AEL PG+L+GDDQIYN I
Sbjct: 12 HKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVM 71
Query: 178 XXXXWRIWKLXXXXXXXXXXXXXPTKNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 357
P NN+ F VE GAGTG TVYPP
Sbjct: 72 PVMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPP 131
Query: 358 LSSNIAHRGRSVDLAIFSLHLAGISS 435
L+ N+AH G SVDL IFSLHLAG+SS
Sbjct: 132 LAGNLAHAGASVDLTIFSLHLAGVSS 157
Score = 35.5 bits (78), Expect = 1.5
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +2
Query: 200 GN*LVPLILGAPDIAFPRKII*DFDSYPP 286
GN LVPL++GAPD+AFPR F PP
Sbjct: 79 GNWLVPLMIGAPDMAFPRMNNMSFWLLPP 107
Score = 35.5 bits (78), Expect = 1.5
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +2
Query: 698 LILPGFGIISHIISQERGKKE 760
LILPGFG+ISH+++ GKKE
Sbjct: 246 LILPGFGMISHVVTYYAGKKE 266
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 91.1 bits (216), Expect = 3e-17
Identities = 57/146 (39%), Positives = 63/146 (43%), Gaps = 1/146 (0%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYN-IXXXXXXXXXXXXXX 177
HKDIGTLY AEL PG+L+GDDQIYN I
Sbjct: 1 HKDIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVM 60
Query: 178 XXXXWRIWKLXXXXXXXXXXXXXPTKNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 357
P NN+ F +E GAGTG TVYPP
Sbjct: 61 PIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPP 120
Query: 358 LSSNIAHRGRSVDLAIFSLHLAGISS 435
L+ N+AH G SVDL IFSLHLAGISS
Sbjct: 121 LAGNLAHAGASVDLTIFSLHLAGISS 146
Score = 45.2 bits (102), Expect = 0.002
Identities = 24/40 (60%), Positives = 26/40 (65%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 629
LFV AV ITA A IT+LLTDRNLNT+FFDP
Sbjct: 172 LFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
Score = 35.1 bits (77), Expect = 1.9
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +2
Query: 200 GN*LVPLILGAPDIAFPRKII*DFDSYPP 286
GN L+PL++GAPD+AFPR F PP
Sbjct: 68 GNWLIPLMIGAPDMAFPRMNNMSFWLLPP 96
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 89.8 bits (213), Expect = 6e-17
Identities = 41/63 (65%), Positives = 48/63 (76%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 689
LF +V +TA+ AGAIT+LLTDRN T+FFDPAGGGDPIL+QH+F FFGHPE
Sbjct: 289 LFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHIFWFFGHPE 348
Query: 690 VYI 698
VYI
Sbjct: 349 VYI 351
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = +1
Query: 247 PTKNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 426
P NN+ + +++ GAG G T YPP+S+ R+VD AIF++H++G
Sbjct: 201 PRLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSG 260
Query: 427 ISS 435
SS
Sbjct: 261 ASS 263
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 88.6 bits (210), Expect = 1e-16
Identities = 43/63 (68%), Positives = 46/63 (73%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 689
LF AV ITA AG IT++LTDRN NTSFF+ AGGGDPILYQHLF FFGHPE
Sbjct: 184 LFAWAVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFFGHPE 243
Query: 690 VYI 698
VYI
Sbjct: 244 VYI 246
Score = 66.1 bits (154), Expect = 9e-10
Identities = 48/146 (32%), Positives = 55/146 (37%), Gaps = 2/146 (1%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYN-IXXXXXXXXXXXXXX 177
KDIG LY EL PG I D+Q+YN I
Sbjct: 13 KDIGVLYLIYALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIFFMVM 72
Query: 178 XXXXWRIWKLXXXXXXXXXXXXXPTKNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 357
P NNI + +ENG GTG T+YPP
Sbjct: 73 PALIGGFGNFLLPLGLGGPDMGFPRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPP 132
Query: 358 LSSNIAHRGRSVDLAIFSLHLAGISS 435
LS +H G SVDLAIF LHL+GISS
Sbjct: 133 LSGIQSHSGPSVDLAIFGLHLSGISS 158
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 87.8 bits (208), Expect = 3e-16
Identities = 40/63 (63%), Positives = 46/63 (73%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 689
LFV +V +T+F A AIT+LL DRN NTSF+DP GGGD +LYQHLF FFGHPE
Sbjct: 187 LFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGHPE 246
Query: 690 VYI 698
VYI
Sbjct: 247 VYI 249
Score = 57.6 bits (133), Expect = 3e-07
Identities = 31/63 (49%), Positives = 32/63 (50%)
Frame = +1
Query: 247 PTKNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 426
P NN F E G GTG TVYPPLSS +H G SVDL IFS HL G
Sbjct: 99 PRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVG 158
Query: 427 ISS 435
I S
Sbjct: 159 IGS 161
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 86.2 bits (204), Expect = 8e-16
Identities = 42/58 (72%), Positives = 44/58 (75%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 683
LFV AV ITA AGAIT+LLTDRN+NTSFFDPAGGGDPILYQHLF F GH
Sbjct: 102 LFVWAVEITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
Score = 66.5 bits (155), Expect = 7e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +1
Query: 316 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 435
VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+AG+ S
Sbjct: 37 VEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXS 76
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 85.8 bits (203), Expect = 1e-15
Identities = 41/63 (65%), Positives = 46/63 (73%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 689
LFV +V +TAF A AIT+LLTDRN T+F+D AGGGDP LYQHLF FFGHPE
Sbjct: 226 LFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFGHPE 285
Query: 690 VYI 698
VYI
Sbjct: 286 VYI 288
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +1
Query: 322 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 435
NGAGTG TVY PLS++ G +VD+AI SLH+AG SS
Sbjct: 164 NGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASS 200
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 85.4 bits (202), Expect = 1e-15
Identities = 54/146 (36%), Positives = 63/146 (43%), Gaps = 1/146 (0%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYN-IXXXXXXXXXXXXXX 177
HKDIG+LY EL +PGS++GDD +YN I
Sbjct: 13 HKDIGSLYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVM 72
Query: 178 XXXXWRIWKLXXXXXXXXXXXXXPTKNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 357
P NNI F +VE GAGTG TVYPP
Sbjct: 73 PTMIGGFGNWFVPLMIGAPDMAFPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPP 132
Query: 358 LSSNIAHRGRSVDLAIFSLHLAGISS 435
L+S AH G SVD+AIFSLHLAG+SS
Sbjct: 133 LASIQAHSGGSVDMAIFSLHLAGLSS 158
Score = 78.6 bits (185), Expect = 2e-13
Identities = 39/57 (68%), Positives = 42/57 (73%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 680
LFV +V ITA AGAIT+LLTDR NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 184 LFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
Score = 35.9 bits (79), Expect = 1.1
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +2
Query: 200 GN*LVPLILGAPDIAFPRKII*DFDSYPPPLY 295
GN VPL++GAPD+AFPR F PP L+
Sbjct: 80 GNWFVPLMIGAPDMAFPRLNNISFWLLPPALF 111
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 84.6 bits (200), Expect = 2e-15
Identities = 43/63 (68%), Positives = 46/63 (73%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 689
LF AV ITA A AIT+LLTDRNLNTSF++ AGGGD ILYQHLF FFGHPE
Sbjct: 210 LFGWAVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWFFGHPE 269
Query: 690 VYI 698
VYI
Sbjct: 270 VYI 272
Score = 60.1 bits (139), Expect = 6e-08
Identities = 29/63 (46%), Positives = 35/63 (55%)
Frame = +1
Query: 247 PTKNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 426
P NN+ + I+ENG GTG T+YPPLS +H VDL IF LHL+G
Sbjct: 122 PRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSG 181
Query: 427 ISS 435
ISS
Sbjct: 182 ISS 184
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 84.2 bits (199), Expect = 3e-15
Identities = 40/63 (63%), Positives = 44/63 (69%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 689
LFV A+ ITAF + IT+LL DRN NTSFF+ AGGGDPI YQH F FFGHPE
Sbjct: 184 LFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFGHPE 243
Query: 690 VYI 698
VYI
Sbjct: 244 VYI 246
Score = 66.1 bits (154), Expect = 9e-10
Identities = 36/63 (57%), Positives = 39/63 (61%)
Frame = +1
Query: 247 PTKNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 426
P N+I F +VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL
Sbjct: 96 PRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTS 155
Query: 427 ISS 435
ISS
Sbjct: 156 ISS 158
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 84.2 bits (199), Expect = 3e-15
Identities = 39/63 (61%), Positives = 46/63 (73%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 689
LFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFGHPE
Sbjct: 184 LFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGHPE 243
Query: 690 VYI 698
VYI
Sbjct: 244 VYI 246
Score = 67.3 bits (157), Expect = 4e-10
Identities = 36/63 (57%), Positives = 39/63 (61%)
Frame = +1
Query: 247 PTKNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 426
P NNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTS 155
Query: 427 ISS 435
ISS
Sbjct: 156 ISS 158
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 81.8 bits (193), Expect = 2e-14
Identities = 49/118 (41%), Positives = 55/118 (46%), Gaps = 1/118 (0%)
Frame = +1
Query: 85 ELGNPGSLIGDDQIYNIXXXXXXXXXXXXXXXXXX-WRIWKLXXXXXXXXXXXXXPTKNN 261
ELG PGS IG+DQ+YN+ P NN
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 262 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 435
+ F VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG+SS
Sbjct: 83 MSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSS 140
Score = 78.2 bits (184), Expect = 2e-13
Identities = 38/53 (71%), Positives = 40/53 (75%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 668
LFV +V ITA AGAIT+LLTDRN NTSFFDPAGGGDPILYQHLF
Sbjct: 166 LFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
Score = 37.1 bits (82), Expect = 0.48
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = +2
Query: 200 GN*LVPLILGAPDIAFPRKII*DFDSYPPPL 292
GN LVPL+LGAPD+AFPR F PP L
Sbjct: 62 GNWLVPLMLGAPDMAFPRLNNMSFWFLPPSL 92
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 78.6 bits (185), Expect = 2e-13
Identities = 36/63 (57%), Positives = 43/63 (68%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 689
LF+ A ITA AG +T++L DRN NTSF+D GGGD IL+QH+F FFGHPE
Sbjct: 186 LFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILFQHIFWFFGHPE 245
Query: 690 VYI 698
VYI
Sbjct: 246 VYI 248
Score = 39.9 bits (89), Expect = 0.068
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = +1
Query: 247 PTKNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 426
P NN+ F + E G G G T+YP L H + D +F++HL G
Sbjct: 98 PRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLG 157
Query: 427 ISS 435
ISS
Sbjct: 158 ISS 160
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 78.2 bits (184), Expect = 2e-13
Identities = 37/63 (58%), Positives = 44/63 (69%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 689
LFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPE
Sbjct: 201 LFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPE 260
Query: 690 VYI 698
VYI
Sbjct: 261 VYI 263
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/63 (41%), Positives = 39/63 (61%)
Frame = +1
Query: 247 PTKNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 426
P NN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 427 ISS 435
+SS
Sbjct: 173 LSS 175
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 78.2 bits (184), Expect = 2e-13
Identities = 37/63 (58%), Positives = 44/63 (69%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 689
LFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPE
Sbjct: 201 LFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPE 260
Query: 690 VYI 698
VYI
Sbjct: 261 VYI 263
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/63 (41%), Positives = 39/63 (61%)
Frame = +1
Query: 247 PTKNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 426
P NN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 427 ISS 435
+SS
Sbjct: 173 LSS 175
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 77.8 bits (183), Expect = 3e-13
Identities = 41/75 (54%), Positives = 49/75 (65%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 689
LFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHL F
Sbjct: 183 LFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHL---FSKTT 239
Query: 690 VYI*FYQDLV*FLIL 734
+YI F+ + F +L
Sbjct: 240 LYISFFYLIYKFTLL 254
Score = 71.3 bits (167), Expect = 2e-11
Identities = 54/147 (36%), Positives = 57/147 (38%), Gaps = 3/147 (2%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYN-IXXXXXXXXXXXXX 174
KDIGTLY EL PG L GD Q+YN I
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 175 XXXXXWRIWKLXXXXXXXXXXXXXPTKNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 354
P NNI F VE GAGTG TVYP
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYP 130
Query: 355 PLSSNIAHRGRSVDLAIFSLHLAGISS 435
PLS +H G SVDLAIFSLHL+GISS
Sbjct: 131 PLSGLQSHSGGSVDLAIFSLHLSGISS 157
Score = 35.1 bits (77), Expect = 1.9
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +2
Query: 200 GN*LVPLILGAPDIAFPRKII*DFDSYPPPL 292
GN LVP+++GAPD+AFPR F PP L
Sbjct: 79 GNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 77.4 bits (182), Expect = 4e-13
Identities = 33/40 (82%), Positives = 37/40 (92%)
Frame = +3
Query: 579 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 698
IT++LTDRN NTSFF+ AGGGDPIL+QHLF FFGHPEVYI
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYI 271
Score = 61.7 bits (143), Expect = 2e-08
Identities = 48/150 (32%), Positives = 57/150 (38%), Gaps = 6/150 (4%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYN-IXXXXXXXXXXXXXX 177
KDIGTLY EL PG I ++Q+YN I
Sbjct: 41 KDIGTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVM 100
Query: 178 XXXXWRIWKLXXXXXXXXXXXXXPTKNNIRFXXXXXXXXXXXXXXIVENGAGTG*TV--- 348
P NNI F I+E G GTG T+
Sbjct: 101 PALIGGFGNFLMPLMIGGPDMAFPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKD 160
Query: 349 -YPPLSSNIAHRGRSVDLAIFSLHLAGISS 435
YPPLS +H G SVDLAIF+LHL+G+SS
Sbjct: 161 KYPPLSGLQSHSGPSVDLAIFALHLSGVSS 190
Score = 33.5 bits (73), Expect = 5.9
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +2
Query: 200 GN*LVPLILGAPDIAFPRKII*DFDSYPPPL 292
GN L+PL++G PD+AFPR F PP L
Sbjct: 108 GNFLMPLMIGGPDMAFPRLNNISFWLLPPSL 138
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 75.8 bits (178), Expect = 1e-12
Identities = 31/43 (72%), Positives = 37/43 (86%)
Frame = +3
Query: 570 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 698
A IT+LL DRN T+FF+P+GGGDPIL+QHLF FFGHPEVY+
Sbjct: 293 ASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYV 335
Score = 39.1 bits (87), Expect = 0.12
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +1
Query: 325 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 435
G G G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS 252
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 74.1 bits (174), Expect = 3e-12
Identities = 33/63 (52%), Positives = 42/63 (66%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 689
+FV +T+F AG++ LL DRN NTSF+D GG+P+LYQHLF FFGHPE
Sbjct: 193 MFVWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWFFGHPE 252
Query: 690 VYI 698
VY+
Sbjct: 253 VYV 255
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 71.3 bits (167), Expect = 2e-11
Identities = 30/43 (69%), Positives = 36/43 (83%)
Frame = +3
Query: 570 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 698
A +T+LL DR+ +TSF+ P GGGDPIL+QHLF FFGHPEVYI
Sbjct: 206 AAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYI 248
Score = 49.2 bits (112), Expect = 1e-04
Identities = 37/146 (25%), Positives = 52/146 (35%), Gaps = 1/146 (0%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYN-IXXXXXXXXXXXXXX 177
HKDIGT+Y EL +PG + +Y+ I
Sbjct: 14 HKDIGTIYLYMGLWSGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVM 73
Query: 178 XXXXWRIWKLXXXXXXXXXXXXXPTKNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 357
+ P NN+ + G G G T+YPP
Sbjct: 74 PTSIGGLGNWFIPLMIKIKDLSMPRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPP 133
Query: 358 LSSNIAHRGRSVDLAIFSLHLAGISS 435
LS++ G +DLA+FSLH+AG+SS
Sbjct: 134 LSNSEFMDGLPIDLAVFSLHMAGMSS 159
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 71.3 bits (167), Expect = 2e-11
Identities = 54/147 (36%), Positives = 57/147 (38%), Gaps = 3/147 (2%)
Frame = +1
Query: 4 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYN-IXXXXXXXXXXXXX 174
KDIGTLY EL PG L GD Q+YN I
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 175 XXXXXWRIWKLXXXXXXXXXXXXXPTKNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 354
P NNI F VE GAGTG TVYP
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYP 130
Query: 355 PLSSNIAHRGRSVDLAIFSLHLAGISS 435
PLS +H G SVDLAIFSLHL+GISS
Sbjct: 131 PLSGLQSHSGGSVDLAIFSLHLSGISS 157
Score = 35.1 bits (77), Expect = 1.9
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +2
Query: 200 GN*LVPLILGAPDIAFPRKII*DFDSYPPPL 292
GN LVP+++GAPD+AFPR F PP L
Sbjct: 79 GNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 70.1 bits (164), Expect = 6e-11
Identities = 33/57 (57%), Positives = 40/57 (70%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 680
LFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFG
Sbjct: 184 LFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFG 240
Score = 67.3 bits (157), Expect = 4e-10
Identities = 36/63 (57%), Positives = 39/63 (61%)
Frame = +1
Query: 247 PTKNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 426
P NNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTS 155
Query: 427 ISS 435
ISS
Sbjct: 156 ISS 158
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 68.9 bits (161), Expect = 1e-10
Identities = 33/57 (57%), Positives = 39/57 (68%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 680
LFV A+ ITA + +T+LL DRN NTSFF+ AGGGDPILY+HLF FFG
Sbjct: 184 LFVWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
Score = 64.9 bits (151), Expect = 2e-09
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = +1
Query: 247 PTKNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 426
P NNI F +VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+
Sbjct: 96 PRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTS 155
Query: 427 ISS 435
ISS
Sbjct: 156 ISS 158
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 68.5 bits (160), Expect = 2e-10
Identities = 28/43 (65%), Positives = 35/43 (81%)
Frame = +3
Query: 570 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 698
A IT++LTD++L T F+D GGDP+LYQHLF FFGHPEVY+
Sbjct: 187 AVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHPEVYV 229
Score = 36.7 bits (81), Expect = 0.63
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +1
Query: 328 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 435
A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIAS 143
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 68.5 bits (160), Expect = 2e-10
Identities = 29/42 (69%), Positives = 33/42 (78%)
Frame = +3
Query: 573 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 698
G + +LL+D + NT FFDP GDPILYQHLF FFGHPEVYI
Sbjct: 210 GGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYI 251
Score = 36.7 bits (81), Expect = 0.63
Identities = 18/40 (45%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +1
Query: 319 ENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLAGISS 435
E G GTG T+YPPLS+++ +VD+ IF L ++G++S
Sbjct: 124 EFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVAS 163
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 65.3 bits (152), Expect = 2e-09
Identities = 33/65 (50%), Positives = 42/65 (64%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 689
LFV ++ +T+F A T L+ DR + T FF+PA GGD +L+QHLF FFGHPE
Sbjct: 199 LFVWSMLVTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWFFGHPE 258
Query: 690 VYI*F 704
VYI F
Sbjct: 259 VYIIF 263
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 64.1 bits (149), Expect = 4e-09
Identities = 32/63 (50%), Positives = 39/63 (61%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 689
LF AV TA A +T+ + DRN NTSFF+ AGGGD +LYQHLF ++ HPE
Sbjct: 189 LFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWWNHPE 248
Query: 690 VYI 698
V I
Sbjct: 249 VKI 251
Score = 57.6 bits (133), Expect = 3e-07
Identities = 31/60 (51%), Positives = 36/60 (60%)
Frame = +1
Query: 256 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 435
NNI F +VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G SS
Sbjct: 104 NNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSS 163
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 64.1 bits (149), Expect = 4e-09
Identities = 31/57 (54%), Positives = 38/57 (66%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 680
LFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFG
Sbjct: 201 LFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFG 257
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/63 (41%), Positives = 39/63 (61%)
Frame = +1
Query: 247 PTKNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 426
P NN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 427 ISS 435
+SS
Sbjct: 173 LSS 175
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 62.9 bits (146), Expect = 8e-09
Identities = 24/43 (55%), Positives = 35/43 (81%)
Frame = +3
Query: 570 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 698
AGA+T+L D+ L T+FF+PA GGDP++YQ++F F+ HP VY+
Sbjct: 159 AGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYV 201
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 62.9 bits (146), Expect = 8e-09
Identities = 26/59 (44%), Positives = 36/59 (61%)
Frame = +3
Query: 522 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 698
++ +T+F ++ DR+ NT FF+ + GDP+LYQHLF FFGHPEVYI
Sbjct: 193 SIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYI 251
Score = 40.7 bits (91), Expect = 0.039
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +1
Query: 316 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 435
+E G+GTG T+YPPLS+++++ G +D IF L AGI+S
Sbjct: 126 LEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIAS 163
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 62.1 bits (144), Expect = 1e-08
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = +3
Query: 603 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 698
N T+FFDPAGGGD IL+QHLF FFGHPEVYI
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYI 222
Score = 35.1 bits (77), Expect = 1.9
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +2
Query: 698 LILPGFGIISHIISQERGKKE 760
LILPGFG+ISH+I+ GK+E
Sbjct: 223 LILPGFGMISHVIAHYSGKRE 243
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 60.5 bits (140), Expect = 4e-08
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = +3
Query: 576 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 698
AIT LL DRN+N++ +D G DP+LYQHLF FFGHPEVY+
Sbjct: 217 AITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPEVYV 255
Score = 33.5 bits (73), Expect = 5.9
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +1
Query: 334 TG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISS 435
+G T+YPPLS+ A G ++DL++ +H+ GISS
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISS 169
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 60.5 bits (140), Expect = 4e-08
Identities = 27/41 (65%), Positives = 32/41 (78%)
Frame = +3
Query: 576 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 698
A+ +LL DRN T+FF AGG DPI +QHLF FFGHPEVY+
Sbjct: 260 ALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYV 299
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 60.1 bits (139), Expect = 6e-08
Identities = 25/43 (58%), Positives = 31/43 (72%)
Frame = +3
Query: 570 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 698
A A+ +L D TSFF+P GGGDP++YQHLF F+ HP VYI
Sbjct: 214 ASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSHPAVYI 256
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 59.7 bits (138), Expect = 8e-08
Identities = 30/55 (54%), Positives = 33/55 (60%)
Frame = +1
Query: 247 PTKNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 411
P NN+ F +VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 11 PRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
Score = 59.7 bits (138), Expect = 8e-08
Identities = 29/56 (51%), Positives = 32/56 (57%)
Frame = +2
Query: 515 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 682
CM C +Y TCFS S+Y IIN K KY IF W P +STFILIFWT
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +1
Query: 313 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 435
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 58.8 bits (136), Expect = 1e-07
Identities = 25/41 (60%), Positives = 32/41 (78%)
Frame = +3
Query: 576 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 698
A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGHPEVY+
Sbjct: 366 AVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHPEVYV 406
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 58.4 bits (135), Expect = 2e-07
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = +3
Query: 573 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 698
G +LL D + TSFF P GGGDP+L+QH F F+ HP VY+
Sbjct: 230 GGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYSHPAVYV 271
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/63 (41%), Positives = 39/63 (61%)
Frame = +1
Query: 247 PTKNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 426
P NN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 427 ISS 435
+SS
Sbjct: 173 LSS 175
Score = 58.4 bits (135), Expect = 2e-07
Identities = 28/53 (52%), Positives = 35/53 (66%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 668
LFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F
Sbjct: 201 LFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIF 253
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 57.6 bits (133), Expect = 3e-07
Identities = 29/41 (70%), Positives = 31/41 (75%)
Frame = +3
Query: 576 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 698
AI +LL DRN TSFF AG G IL+QHLF FFGHPEVYI
Sbjct: 292 AIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYI 330
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 57.2 bits (132), Expect = 4e-07
Identities = 31/63 (49%), Positives = 35/63 (55%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 689
LFV + AF A LL DR+ T FF P GGD +L+QHLF FFGHPE
Sbjct: 201 LFVWMQLVVAFILIFAFPVLTVATIQLLFDRHFGTRFFLPNLGGDAVLWQHLFWFFGHPE 260
Query: 690 VYI 698
VYI
Sbjct: 261 VYI 263
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 56.8 bits (131), Expect = 6e-07
Identities = 24/41 (58%), Positives = 30/41 (73%)
Frame = +3
Query: 576 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 698
A+ +LL DR L ++FFDP GG +L+QH F FGHPEVYI
Sbjct: 224 ALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEVYI 264
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 56.4 bits (130), Expect = 7e-07
Identities = 36/88 (40%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 689
LF ++ IT AG IT+LL+DRN N FF GG PIL+Q++ FGH +
Sbjct: 16 LFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLFGHTD 75
Query: 690 V----YI*FYQDLV*FLILFHKKEEKKK 761
V FYQDL F L+ K++ KK
Sbjct: 76 VLFLILFWFYQDLDLFRKLWWMKKDFKK 103
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 56.0 bits (129), Expect = 1e-06
Identities = 29/48 (60%), Positives = 34/48 (70%), Gaps = 5/48 (10%)
Frame = +3
Query: 570 AGAITILLTDRNLNTSFF-----DPAGGGDPILYQHLF*FFGHPEVYI 698
AGAI +LL +R+L FF DPA GDP L+QH+F FFGHPEVYI
Sbjct: 209 AGAIMLLL-ERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYI 255
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 56.0 bits (129), Expect = 1e-06
Identities = 26/43 (60%), Positives = 31/43 (72%)
Frame = +3
Query: 570 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 698
A A+ +LLTDR + FF+PA GGDPI Y HLF F HPEVY+
Sbjct: 205 AAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYV 247
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 55.6 bits (128), Expect = 1e-06
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = +3
Query: 597 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI*F 704
+R + FFDP GGDP+L+QHLF FGHPEVYI F
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIF 289
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 54.8 bits (126), Expect = 2e-06
Identities = 24/43 (55%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = +3
Query: 573 GAITILLTDRNL-NTSFFDPAGGGDPILYQHLF*FFGHPEVYI 698
G + +L+T NL FDPA GGDP+L+QHLF F+ HP VYI
Sbjct: 229 GLLLVLVTVENLFGFGMFDPARGGDPVLFQHLFWFYSHPAVYI 271
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 54.8 bits (126), Expect = 2e-06
Identities = 29/61 (47%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Frame = +3
Query: 531 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA-----GGGDPILYQHLF*FFGHPEVY 695
+TA A +LL DR+ T FF GGGDPIL+QHLF FGHPEVY
Sbjct: 223 LTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHLFWIFGHPEVY 282
Query: 696 I 698
I
Sbjct: 283 I 283
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 54.4 bits (125), Expect = 3e-06
Identities = 31/65 (47%), Positives = 36/65 (55%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 689
+FV AV + +F A +L DR FF A GDPIL+QHLF FFGHPE
Sbjct: 206 IFVWAVLVMSFMIVFALPPLVIASLMLALDRMAGMHFFT-AASGDPILWQHLFWFFGHPE 264
Query: 690 VYI*F 704
VYI F
Sbjct: 265 VYIIF 269
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 53.6 bits (123), Expect = 5e-06
Identities = 24/43 (55%), Positives = 29/43 (67%)
Frame = +3
Query: 576 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI*F 704
A +L +R+ FF GGDP+L+QHLF FFGHPEVYI F
Sbjct: 231 ATMLLEIERSFGWPFFTAERGGDPLLWQHLFWFFGHPEVYIIF 273
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 53.6 bits (123), Expect = 5e-06
Identities = 22/43 (51%), Positives = 30/43 (69%)
Frame = +3
Query: 576 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI*F 704
A+T+L D+ + T FFD A GGD + YQ+LF F+ HP VY+ F
Sbjct: 205 AVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYVIF 247
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 53.2 bits (122), Expect = 7e-06
Identities = 24/40 (60%), Positives = 28/40 (70%)
Frame = +3
Query: 585 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI*F 704
+L +R L FFD GGDP+L+QHLF FGHPEVYI F
Sbjct: 250 LLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIF 289
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 53.2 bits (122), Expect = 7e-06
Identities = 28/48 (58%), Positives = 31/48 (64%), Gaps = 10/48 (20%)
Frame = +3
Query: 585 ILLTDRNLNTSFFDPA----------GGGDPILYQHLF*FFGHPEVYI 698
+LL DR L TSFF P GGG P+L+QHLF FFGHPEVYI
Sbjct: 238 MLLLDRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEVYI 285
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 53.2 bits (122), Expect = 7e-06
Identities = 26/39 (66%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Frame = +3
Query: 585 ILLTDRNLNTSFF-DPAGGGDPILYQHLF*FFGHPEVYI 698
+LL DRNL T FF +PAGG +L+ HLF FFGHPEVYI
Sbjct: 217 LLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEVYI 253
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 52.4 bits (120), Expect = 1e-05
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +3
Query: 576 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 698
A +L DRN T FFD A GG P+L+QHLF F HP VY+
Sbjct: 241 AFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYV 281
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 52.0 bits (119), Expect = 2e-05
Identities = 27/63 (42%), Positives = 31/63 (49%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 689
LFV TA + +R T FFD A GG P+L+Q LF FFGHPE
Sbjct: 181 LFVWGFFTTAILMIIAMPSLTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLFWFFGHPE 240
Query: 690 VYI 698
VYI
Sbjct: 241 VYI 243
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 51.6 bits (118), Expect = 2e-05
Identities = 24/43 (55%), Positives = 29/43 (67%)
Frame = +3
Query: 576 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI*F 704
A +L +R + FF GGDP+L+QHLF FFGHPEVYI F
Sbjct: 290 ATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYIIF 332
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 51.6 bits (118), Expect = 2e-05
Identities = 19/40 (47%), Positives = 30/40 (75%)
Frame = +3
Query: 579 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 698
+ +++ DR T+FF+P GG+ ++++HLF FGHPEVYI
Sbjct: 215 LALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFGHPEVYI 254
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 50.4 bits (115), Expect = 5e-05
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = +3
Query: 588 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 698
+L DR L +DPA GG +L+QHLF FFGHPEVY+
Sbjct: 235 VLYDRKLGGHLYDPANGGS-LLWQHLFWFFGHPEVYV 270
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 50.4 bits (115), Expect = 5e-05
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = +3
Query: 576 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 698
A ++L +R + S+F+PA GGDP+L+Q F F+ HP VY+
Sbjct: 215 ATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVYV 255
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 50.0 bits (114), Expect = 6e-05
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 689
LFV ++ T+ ++ ++ + FDPA GGDP+L+QH F F+ HP
Sbjct: 202 LFVWSIYATSVIQILATPVLGMSLLLVAVEHAFGWGIFDPARGGDPVLFQHFFWFYSHPA 261
Query: 690 VYI 698
VYI
Sbjct: 262 VYI 264
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 50.0 bits (114), Expect = 6e-05
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = +3
Query: 585 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI*F 704
+L +R + FF A GGD +L+QHLF FGHPEVYI F
Sbjct: 224 LLELERAFDMPFFQAAAGGDALLWQHLFWLFGHPEVYIIF 263
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 49.6 bits (113), Expect = 8e-05
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +3
Query: 576 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 698
A+ +L+ DR +FF+ GG + YQHLF FGHPEVYI
Sbjct: 225 ALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFGHPEVYI 265
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 48.8 bits (111), Expect = 1e-04
Identities = 28/63 (44%), Positives = 32/63 (50%)
Frame = +1
Query: 247 PTKNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 426
P N+ F + G G VYPP SS +AH +VDL IF LHLAG
Sbjct: 85 PRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAG 144
Query: 427 ISS 435
ISS
Sbjct: 145 ISS 147
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/40 (55%), Positives = 26/40 (65%)
Frame = +3
Query: 585 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI*F 704
+L +R FF A GGD +L+QHLF FGHPEVYI F
Sbjct: 224 LLELERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEVYIIF 263
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 48.4 bits (110), Expect = 2e-04
Identities = 32/73 (43%), Positives = 38/73 (52%), Gaps = 10/73 (13%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP----AG------GGDPILYQ 659
L + A ITA A +L+ DR+L TSFF AG GG P+L+Q
Sbjct: 235 LTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIYIAGEALHHQGGSPVLFQ 294
Query: 660 HLF*FFGHPEVYI 698
HLF F GHPEVYI
Sbjct: 295 HLFWFLGHPEVYI 307
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.0 bits (109), Expect = 3e-04
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = +2
Query: 518 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 670
M C +YS +TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +1
Query: 355 PLSSNIAHRGRSVDLAIFSLHLAGISS 435
PL+S+IAH G SVD+AIFSLHLAG+SS
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSS 98
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 46.8 bits (106), Expect = 6e-04
Identities = 39/122 (31%), Positives = 43/122 (35%), Gaps = 1/122 (0%)
Frame = +1
Query: 1 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYN-IXXXXXXXXXXXXXX 177
HKD GTL AELG PG+L+GDDQ N I
Sbjct: 13 HKDXGTLXXIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXM 72
Query: 178 XXXXWRIWKLXXXXXXXXXXXXXPTKNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 357
P NN+ F VE GAGTG TVYPP
Sbjct: 73 PIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPP 132
Query: 358 LS 363
L+
Sbjct: 133 LA 134
Score = 35.5 bits (78), Expect = 1.5
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +2
Query: 200 GN*LVPLILGAPDIAFPRKII*DFDSYPP 286
GN LVPL++GAPD+AFPR F PP
Sbjct: 80 GNWLVPLMIGAPDMAFPRMNNMSFWLLPP 108
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 46.4 bits (105), Expect = 8e-04
Identities = 26/52 (50%), Positives = 30/52 (57%), Gaps = 11/52 (21%)
Frame = +3
Query: 576 AITILLTDRNLNTSFFDPAG-----------GGDPILYQHLF*FFGHPEVYI 698
A +L DR TSFF P+G GG +L+QHLF FFGHPEVYI
Sbjct: 242 ACILLCLDRVAGTSFFIPSGLVFNDHVIPHGGGSALLWQHLFWFFGHPEVYI 293
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 46.4 bits (105), Expect = 8e-04
Identities = 29/74 (39%), Positives = 37/74 (50%), Gaps = 11/74 (14%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP-----------AGGGDPILY 656
L + A+ ITA A ++L DR + T FF P AGGG P+L+
Sbjct: 221 LTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVVNNSPMAAGGGQPLLW 280
Query: 657 QHLF*FFGHPEVYI 698
QHLF F+ HP VYI
Sbjct: 281 QHLFWFYSHPAVYI 294
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 44.0 bits (99), Expect = 0.004
Identities = 21/32 (65%), Positives = 22/32 (68%)
Frame = +2
Query: 602 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLY 697
K KYIIF S W F+STFILIFWT SLY
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLY 38
Score = 42.7 bits (96), Expect = 0.010
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = +1
Query: 697 FNFTRIWYNFSYYFTRKRKKRN 762
FNFT IWYNFSYYF K KK N
Sbjct: 39 FNFTSIWYNFSYYFPSKSKKGN 60
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 43.6 bits (98), Expect = 0.006
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +3
Query: 573 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 698
GA+ +L DR L+ FF GG+ ++Y +LF +GHPEVYI
Sbjct: 249 GALAMLALDRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYI 290
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 42.7 bits (96), Expect = 0.010
Identities = 20/40 (50%), Positives = 26/40 (65%)
Frame = +3
Query: 576 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVY 695
A+ +L DR L T FF GG+ +LY +LF +GHPEVY
Sbjct: 268 ALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVY 307
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 42.7 bits (96), Expect = 0.010
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +2
Query: 698 LILPGFGIISHIISQERGKKE 760
LILPGFG+ISHIISQE GKKE
Sbjct: 159 LILPGFGMISHIISQESGKKE 179
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 42.3 bits (95), Expect = 0.013
Identities = 19/41 (46%), Positives = 27/41 (65%)
Frame = +3
Query: 576 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 698
A+ +L DR L+ F GG+P++Y +LF +GHPEVYI
Sbjct: 249 ALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYI 289
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 41.5 bits (93), Expect = 0.022
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +3
Query: 576 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 698
A+ +L DR FF GG P+L+ +LF +GHPEVYI
Sbjct: 245 ALALLSFDRLFGAHFFTLEAGGMPMLWANLFWIWGHPEVYI 285
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 41.1 bits (92), Expect = 0.029
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 11/80 (13%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-----------DPAGGGDPILY 656
+F ++ +T + A+ IL +D L T++F D G +L+
Sbjct: 194 IFSLSINLTVWMMLFAFAALLAALMILASDHILGTTYFQYSIDGTTMATDADNPGASLLW 253
Query: 657 QHLF*FFGHPEVYI*FYQDL 716
HLF FFGHPEVYI F+ L
Sbjct: 254 AHLFWFFGHPEVYIVFFPAL 273
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 40.7 bits (91), Expect = 0.039
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +3
Query: 606 LNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 698
L S F+P GG P+LYQ F F+ HP VY+
Sbjct: 233 LGLSMFNPGIGGVPVLYQQFFWFYSHPAVYV 263
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 40.3 bits (90), Expect = 0.051
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +3
Query: 633 GGGDPILYQHLF*FFGHPEVYI 698
GGG P+L+QHLF F+ HP VYI
Sbjct: 276 GGGQPLLWQHLFWFYSHPAVYI 297
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 39.1 bits (87), Expect = 0.12
Identities = 34/118 (28%), Positives = 41/118 (34%), Gaps = 1/118 (0%)
Frame = +1
Query: 85 ELGNPGSLIGDDQIYN-IXXXXXXXXXXXXXXXXXXWRIWKLXXXXXXXXXXXXXPTKNN 261
ELG PGSL+ DDQ+YN + P NN
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 262 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 435
+ F + G + PL G SVDLAIF LHLAG+SS
Sbjct: 84 MSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVTISAGPSVDLAIFPLHLAGVSS 139
Score = 38.3 bits (85), Expect = 0.21
Identities = 41/142 (28%), Positives = 55/142 (38%), Gaps = 1/142 (0%)
Frame = +2
Query: 200 GN*LVPLILGAPDIAFPRKII*DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISHI 379
GN LVPL+LGAPD+AFPR F +P +Y + K +DE TP + +
Sbjct: 63 GNWLVPLMLGAPDMAFPRMNNMSFGFFPLHWHY-YSFFTVKGGLARDELSTPLYLVTISA 121
Query: 380 EEDP*ILLFFHYI*QVFHQL*EXXXXXXXXXXXXXXXXXXXXXXXCMSCRDYSXXXXXXT 559
+ +F ++ V L C+ Y
Sbjct: 122 GPSVDLAIFPLHLAGVSSILGSYWLYYNNSLYTVSSSSNGTTTFICLISVYYRYPSTPFF 181
Query: 560 TCFSWSYYNIINRS-KLKYIIF 622
TC S SYY IIN L YII+
Sbjct: 182 TCTSSSYYYIINSPLLLHYIIW 203
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 38.3 bits (85), Expect = 0.21
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +3
Query: 588 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 698
+ DR L+T F+ GG +LY +L +GHPEVYI
Sbjct: 248 IFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYI 284
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 36.7 bits (81), Expect = 0.63
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +3
Query: 588 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 698
L DR L+ FF GG+ + + ++F FGHPEVYI
Sbjct: 273 LALDRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYI 309
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 36.7 bits (81), Expect = 0.63
Identities = 21/63 (33%), Positives = 33/63 (52%)
Frame = +3
Query: 510 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 689
LFV AV A G +LL ++ S++ GG +++++LF +FGHPE
Sbjct: 213 LFVWAVFWVAAISWFVFPEITGLFFLLLVGNLMHASYYISNYGG-ALMWENLFWYFGHPE 271
Query: 690 VYI 698
VY+
Sbjct: 272 VYL 274
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 35.9 bits (79), Expect = 1.1
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +2
Query: 698 LILPGFGIISHIISQERGKKE 760
LILPGFG+ISHI++ GKKE
Sbjct: 11 LILPGFGMISHIVAYYSGKKE 31
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 35.1 bits (77), Expect = 1.9
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +2
Query: 200 GN*LVPLILGAPDIAFPRKII*DFDSYPPPL 292
GN LVP+++GAPD+AFPR F PP L
Sbjct: 79 GNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 34.3 bits (75), Expect = 3.4
Identities = 21/54 (38%), Positives = 25/54 (46%)
Frame = +3
Query: 255 K*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTT 416
K +KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 82 KQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPT 135
>UniRef50_Q7RMW2 Cluster: Phosphatase-related; n=2; Plasmodium
(Vinckeia)|Rep: Phosphatase-related - Plasmodium yoelii
yoelii
Length = 410
Score = 33.9 bits (74), Expect = 4.5
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +1
Query: 643 TQFYINIYFDFLDILKFIFNFTRIWYNFSYYFTRKRKKR 759
T FYINI+F FL IL + + ++ +Y+ T+ + K+
Sbjct: 372 TNFYINIFFYFLKILYILSSIVKVSERDTYHVTKSKVKK 410
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 33.1 bits (72), Expect = 7.8
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 200 GN*LVPLILGAPDIAFPRKII*DFDSYPPPL 292
GN VP+++G+PD+AFPR F PP L
Sbjct: 83 GNWFVPILIGSPDMAFPRLNNISFWLLPPSL 113
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 587,814,158
Number of Sequences: 1657284
Number of extensions: 10190590
Number of successful extensions: 24196
Number of sequences better than 10.0: 99
Number of HSP's better than 10.0 without gapping: 22918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24152
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64204279620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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