Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0852
         (469 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000519E4F Cluster: PREDICTED: similar to Lobe CG101...    34   1.3  
UniRef50_UPI0000D5732A Cluster: PREDICTED: similar to CG10109-PA...    34   1.8  
UniRef50_Q5CYM7 Cluster: P-type ATpase (Calcium/phospholipid-tra...    33   4.1  
UniRef50_O85827 Cluster: Type IV pilin; n=1; Eikenella corrodens...    32   5.4  
UniRef50_Q821M5 Cluster: Putative uncharacterized protein; n=3; ...    31   9.5  
UniRef50_Q182S5 Cluster: Putative primosomal protein N'; n=2; Cl...    31   9.5  

>UniRef50_UPI0000519E4F Cluster: PREDICTED: similar to Lobe
           CG10109-PA; n=1; Apis mellifera|Rep: PREDICTED: similar
           to Lobe CG10109-PA - Apis mellifera
          Length = 397

 Score = 34.3 bits (75), Expect = 1.3
 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +3

Query: 81  CKCLNVSLESDKVE-DNVDREKLELTSSEQRDIFFSE 188
           CKCLNVS++S   E    +   +ELT  EQ D FF +
Sbjct: 5   CKCLNVSIKSRGTELQKFNINDIELTLEEQNDSFFHQ 41


>UniRef50_UPI0000D5732A Cluster: PREDICTED: similar to CG10109-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG10109-PA - Tribolium castaneum
          Length = 434

 Score = 33.9 bits (74), Expect = 1.8
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = +3

Query: 24  KXVIVFLSHQYSHTMVLFVCKCLNVSLESDKVEDNVDREKLELTSSEQRDIFFSE 188
           +  IV +  +Y     +  C CLNV +E++     V  E LEL+  E +D FF +
Sbjct: 49  RLAIVVVLCKYFLPKKMLSCHCLNVIIETEGDLQKVTPETLELSPEEVQDSFFKQ 103


>UniRef50_Q5CYM7 Cluster: P-type ATpase
           (Calcium/phospholipid-transporter), 9 transmembrane
           domains; n=2; Cryptosporidium|Rep: P-type ATpase
           (Calcium/phospholipid-transporter), 9 transmembrane
           domains - Cryptosporidium parvum Iowa II
          Length = 1278

 Score = 32.7 bits (71), Expect = 4.1
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = +3

Query: 69  VLFVCKCLNVSLESDKVEDNVDREKLELTSSEQRDIFFS 185
           VL +CK L + LESDK E  + + K   + SE+++  FS
Sbjct: 882 VLSICKSLGIDLESDKSERFLRKVKASGSKSEKKETNFS 920


>UniRef50_O85827 Cluster: Type IV pilin; n=1; Eikenella
           corrodens|Rep: Type IV pilin - Eikenella corrodens
          Length = 149

 Score = 32.3 bits (70), Expect = 5.4
 Identities = 14/23 (60%), Positives = 16/23 (69%)
 Frame = +3

Query: 348 NSNRTSDFSWY*CGGTLDSTYLP 416
           N+NRT    W  CGGTL+S YLP
Sbjct: 123 NANRTQLIQWQ-CGGTLNSRYLP 144


>UniRef50_Q821M5 Cluster: Putative uncharacterized protein; n=3;
           Chlamydophila|Rep: Putative uncharacterized protein -
           Chlamydophila caviae
          Length = 747

 Score = 31.5 bits (68), Expect = 9.5
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +3

Query: 84  KCLNVSLESDKVEDNVDREKLELTSSEQRDI 176
           +CL    E  K+ DN+ R+  ELTSS+QR++
Sbjct: 581 RCLRTKTELKKILDNIKRD-AELTSSQQREL 610


>UniRef50_Q182S5 Cluster: Putative primosomal protein N'; n=2;
           Clostridium difficile|Rep: Putative primosomal protein
           N' - Clostridium difficile (strain 630)
          Length = 829

 Score = 31.5 bits (68), Expect = 9.5
 Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
 Frame = +3

Query: 9   LFAEFKXVIVFLSHQY-SHTMVLFVCKCLNVSLESDKVEDNVDREKLELTSSEQRDIFF 182
           L+   K  I+ L  +Y +H     VC  +++SLESDK++D +++ K+ + S ++  + F
Sbjct: 172 LYTMNKNGIIKLCWEYKNHKNEKKVCY-ISLSLESDKIDDYIEQNKINVGSKQKEILSF 229


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 405,028,620
Number of Sequences: 1657284
Number of extensions: 7021862
Number of successful extensions: 15113
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15113
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25610991215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)