Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0852
         (469 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    24   2.3  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   5.3  
AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    22   9.3  

>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 24.2 bits (50), Expect = 2.3
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 387 GGTLDSTYLPGLWNDCVCSIAG 452
           G    +T +PG WN   CS+ G
Sbjct: 166 GSAAAATGVPGSWNTNQCSLTG 187


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = +1

Query: 331 PANILKTQIEHQILVGTSVVGRWTLHTCLACGMTV 435
           P NI  ++  H  L    + G   LH C  CG  V
Sbjct: 475 PDNIDGSKAWHMRLTFERLSGGCNLHRCKLCGKVV 509


>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 22.2 bits (45), Expect = 9.3
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +3

Query: 387 GGTLDSTYLPGLWNDCVCSIAG 452
           G    +  +PG WN   CS+ G
Sbjct: 166 GSAAAAAGVPGSWNTNQCSLTG 187


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 439,064
Number of Sequences: 2352
Number of extensions: 7482
Number of successful extensions: 230
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 230
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 40820256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)