Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0850
         (756 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical p...    77   2e-14
AL021492-3|CAA16382.3|  893|Caenorhabditis elegans Hypothetical ...    31   1.2  
U40958-3|ABQ13075.1|  219|Caenorhabditis elegans Hypothetical pr...    28   6.2  
AF101316-3|AAC69232.2|  508|Caenorhabditis elegans Hypothetical ...    28   6.2  
L25599-3|ABN43087.1|  570|Caenorhabditis elegans Hypothetical pr...    28   8.2  

>Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical
           protein F25H2.11 protein.
          Length = 181

 Score = 76.6 bits (180), Expect = 2e-14
 Identities = 36/68 (52%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
 Frame = +1

Query: 61  MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEA--DEGT 234
           M IYKDI T DE+ SD++ MKLVD+++YE  G+ V R +G+I + G NPSAEE   D+G+
Sbjct: 1   MLIYKDIFTDDELSSDSFPMKLVDDLVYEFKGKHVVRKEGEIVLAGSNPSAEEGAEDDGS 60

Query: 235 DSAVESGL 258
           D  VE G+
Sbjct: 61  DEHVERGI 68



 Score = 49.2 bits (112), Expect = 3e-06
 Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
 Frame = +3

Query: 255 VDIVLNHRLVETYAFGDKKSYTLYLKDYMXXXXXXXXXXXXDQ--VEVFKTNMNKVMKDI 428
           +DIVLNH+LVE   + D   +  Y+K +M            D+  V+ FK  +   +  +
Sbjct: 68  IDIVLNHKLVEMNCYEDASMFKAYIKKFMKNVIDHMEKNNRDKADVDAFKKKIQGWVVSL 127

Query: 429 LG--RFKELQFFTGESM---DCDGMVAMMEYR 509
           L   RFK L FF GE       +G VA++EYR
Sbjct: 128 LAKDRFKNLAFFIGERAAEGAENGQVAIIEYR 159


>AL021492-3|CAA16382.3|  893|Caenorhabditis elegans Hypothetical
           protein Y45F10D.7 protein.
          Length = 893

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 19/72 (26%), Positives = 34/72 (47%)
 Frame = -1

Query: 294 RMFRLACGSGLCQPALDGRVRALVSLFSRRIKTLDLDITLCSRHQPTGHFVNNFIDQFHF 115
           +MF+     G+C P     + ALV++     +++ L  T+C R       V N ++   F
Sbjct: 505 KMFKKDVRLGICAPCPSNSLVALVAIAENGKESVILVDTVCHRVARAFETVGNKVNAMTF 564

Query: 114 VSVREHLITSDN 79
            S  + L+ +DN
Sbjct: 565 SSDGKWLLVADN 576


>U40958-3|ABQ13075.1|  219|Caenorhabditis elegans Hypothetical
           protein F09F9.5 protein.
          Length = 219

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 365 FQFCY*FFHIVFEVQCVGFLVTEGVCF 285
           +Q C+ F H+      +GF    GVCF
Sbjct: 53  YQTCFGFMHVKIATCSIGFFALLGVCF 79


>AF101316-3|AAC69232.2|  508|Caenorhabditis elegans Hypothetical
           protein F52F10.2 protein.
          Length = 508

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 413 FVHVCFKYFNLVKRLLFQFCY*FFHI 336
           F+++C +Y    +R L  FCY  F I
Sbjct: 137 FIYLCIEYLPTGRRYLMMFCYILFDI 162


>L25599-3|ABN43087.1|  570|Caenorhabditis elegans Hypothetical
           protein F54H12.8 protein.
          Length = 570

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -1

Query: 744 LFYCCMQYIFLNTKLFSLVMREASSCQDADMIDK*IKK 631
           LFYC + Y+F+   +  +  RE S  +D   I + IK+
Sbjct: 505 LFYCSLLYLFIFVTVQMIPAREISIMKDLHHIGREIKR 542


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,623,119
Number of Sequences: 27780
Number of extensions: 338230
Number of successful extensions: 839
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 839
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)