Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0848
         (744 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021572-1|CAA16516.2|  654|Caenorhabditis elegans Hypothetical ...    29   4.6  
AF025469-4|AAG00032.1|  270|Caenorhabditis elegans Hypothetical ...    28   6.1  

>AL021572-1|CAA16516.2|  654|Caenorhabditis elegans Hypothetical
           protein W06H3.1 protein.
          Length = 654

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +2

Query: 158 YMIEKKKTHKDCFYENIYKDTR*ELSTLLAHISARADDTLQR 283
           + +E K  H +  YE+  K  + +L T+LAH   R D   Q+
Sbjct: 291 FQMELKAVHPNLNYEDGMKIKKADLHTILAHAHLRIDQLSQK 332


>AF025469-4|AAG00032.1|  270|Caenorhabditis elegans Hypothetical
           protein W09B6.5 protein.
          Length = 270

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 3/22 (13%)
 Frame = -1

Query: 186 LCVFFFSIIYNKYMLA---SDH 130
           LCV+FFS+ +N Y L+   SDH
Sbjct: 159 LCVYFFSLAFNSYSLSLRLSDH 180


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,342,831
Number of Sequences: 27780
Number of extensions: 341119
Number of successful extensions: 750
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)